Rv3793 - c.903C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
11 Sensitive
0 RR-TB
35 HR-TB
5 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 6 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9 | 38 |
| lineage1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage3 | 2 |
| lineage3.1.2.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.2.1.2 | 3 |
| lineage2.2.1 | 3 |
| lineage4.3.4.1 | 2 |
| lineage2.2 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| M.canetti;lineage2.2 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La2;lineage4.9 | 1 |
| La1.7 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.5 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| 1 | |
| lineage4.3.4 | 1 |
| lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR2446566 | Other | lineage4.9 | None | ERR400529 | Other | lineage3 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6359082 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR752229 | Other | lineage4.5 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4769452 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6046046 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341330 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR181824 | HR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5535933 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6045548 | Sensitive | lineage4.9 | None |
|---|
