EBG00000313339 - n.2106C>T
Drug resistance types
116 Sensitive
37 RR-TB
104 HR-TB
71 MDR-TB
14 Pre-XDR-TB
1 XDR-TB
177 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 184 |
| lineage4.3.4.2.1 | 9 |
| lineage1.2.1.2.1 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage4.3.3 | 10 |
| lineage4.2.1 | 7 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage2.2.2 | 4 |
| M.canetti;lineage2.1;lineage4.9 | 19 |
| lineage3 | 15 |
| lineage1.1.2 | 2 |
| lineage2.2 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| 3 | |
| lineage2.2.1 | 29 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| La1.7;lineage4.9 | 6 |
| lineage4.8 | 20 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La1;lineage4.9 | 3 |
| lineage5.2 | 2 |
| lineage4.1.2.1 | 21 |
| lineage3.1.3 | 2 |
| La1.7.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4 | 6 |
| lineage1.1.1 | 3 |
| lineage4.1.2 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 2 |
| lineage6.1.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.2.1 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage6.1.3 | 3 |
| La1.8.1 | 7 |
| lineage2.1;lineage4.9 | 4 |
| lineage4.6.4 | 2 |
| lineage2;lineage4.9 | 1 |
| lineage2.1;lineage4.3.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La1.2 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| lineage4.4.1.1 | 3 |
| lineage2.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| La3;lineage4.9 | 7 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1 | 1 |
| lineage4.1.1.3 | 4 |
| M.canetti;lineage2.1 | 1 |
| lineage4.3.4.2 | 3 |
| lineage2.2.1.1 | 3 |
| lineage1.1.1.1 | 2 |
| lineage4.9;lineage7 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.8.1 | 2 |
| lineage4.3.2 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.7 | 2 |
| La1.7 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.9 | 3 |
| lineage2.2.1.2 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage6.3.1 | 1 |
| La3;lineage4 | 1 |
| lineage4.6.1.1 | 3 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage4.9;lineage9 | 2 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| lineage6.2.3 | 1 |
| La1.6 | 1 |
| lineage4.1.1.2 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.3 | 1 |
| M.canetti;lineage2.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage6 | 1 |
| lineage1.1.3.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage3;lineage4 | 1 |
| La1;lineage4.1.2 | 1 |
| M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 520 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR779852 | Sensitive | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR1510066 | RR-TB | lineage1.2.1.2.1 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR5908228 | RR-TB | lineage4.3.3 | None | SRR8692898 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | ERR4813861 | Other | lineage4.3.3 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR867545 | Other | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4821054 | Sensitive | lineage3 | None | ERR245675 | Sensitive | lineage1.1.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR987722 | MDR-TB | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR1173770 | Other | lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | SRR1162864 | Other | lineage4.1.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR7240492 | HR-TB | La1.7.1 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR867543 | Sensitive | lineage4.6.2.2 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819241 | Other | lineage4.9 | None | SRR1140716 | Other | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR13285304 | Other | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR3675507 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | ERR10796622 | Other | lineage4.8 | None | SRR13861235 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR3275220 | Other | lineage3 | nl | SRR1180345 | Other | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | ERR3797067 | Other | La1.8.1 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675482 | Other | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR10796594 | Other | lineage4.9 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | ERR8665994 | Other | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR3797083 | RR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR10796589 | Other | lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769427 | Other | La1.2 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR5341300 | HR-TB | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR3468544 | Other | lineage2.1;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | ERR11798607 | MDR-TB | lineage2.2.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | SRR1165584 | Other | lineage4.1.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR19303899 | Other | lineage3 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR9119096 | RR-TB | lineage4.3.3 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR8692782 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | DRR184889 | Sensitive | lineage1.1.1.1 | vn | ERR3797087 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR13267586 | Sensitive | lineage1.1.1 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR2446118 | Other | lineage4.1.2.1 | nl | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR1640750 | Other | None | SRR17832802 | HR-TB | lineage3 | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR29053386 | Sensitive | lineage4.3.2 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | ERR867544 | Other | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR5311098 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR3797023 | HR-TB | La1.8.1 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | SRR3675222 | Other | La1.7 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR7902593 | Sensitive | lineage1.1.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR7755657 | Other | lineage4.8 | None | ERR3468607 | Other | lineage4.9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR069978 | HR-TB | lineage2.2.2 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR3283028 | Other | La3;lineage4 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR1173834 | Other | lineage4.6.1.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1166821 | Other | lineage4.1.2.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR23310833 | MDR-TB | lineage4.2.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR13861381 | HR-TB | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR8692887 | Other | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR3675389 | Other | lineage4.9 | None | SRR19304104 | Other | lineage4.8 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR10796624 | Other | lineage4.8 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR5341453 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR1173182 | Other | lineage4.6.1.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10796566 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR5341456 | Other | lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7236177 | Other | La1.8.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR10796591 | Other | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR10796560 | Other | lineage4.9 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR137286 | Other | lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR10796630 | Other | lineage6.2.3 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR7069473 | Other | lineage4.1.1.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR2229760 | Sensitive | lineage4.8 | dk | ERR502481 | RR-TB | lineage4.9 | None | SRR7070553 | Other | lineage3 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR1159378 | Other | lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR23961529 | Other | lineage4.9 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR13292526 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | ERR10796559 | Other | lineage4.9 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR10796621 | Other | lineage4.8 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR7645927 | Other | lineage4.8 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR8692858 | Other | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR15276982 | XDR-TB | lineage3 | None | ERR10796573 | Other | lineage4.8 | None | ERR3797019 | Other | La1.8.1 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | SRR7496471 | Sensitive | lineage4 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR19303876 | Other | lineage4.7 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4820829 | Other | lineage4.8 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | ERR2229143 | RR-TB | lineage4.9 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR6045928 | Other | lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4816478 | HR-TB | lineage4 | None | ERR2446144 | Other | lineage3 | nl | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR1173767 | MDR-TB | lineage4.4.1.1 | None | ERR9787362 | Sensitive | lineage6 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR6866639 | Other | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR3275215 | RR-TB | lineage4.1.2.1 | nl | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR6045158 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR13285305 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR5341467 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1173777 | Sensitive | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR3675515 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | ERR323037 | Other | lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR28868489 | Other | lineage2.2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR18002964 | Other | lineage2.2.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | SRR13861332 | Other | lineage4.9 | None |
|---|
