Rv2477c - c.541T>C


Drug resistance types
66 Sensitive 34 RR-TB 101 HR-TB 146 MDR-TB 31 Pre-XDR-TB 2 XDR-TB 146 Other
lineage Counts
lineage Count
lineage4.9 174
lineage4.5 3
lineage4.6.4;lineage4.9 1
La3;lineage4.9 6
lineage4.1.2.1 13
lineage1.1.1 1
lineage2.1;lineage4.9 18
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.2.1 27
La1.7.1;La1.7.X-unk4;lineage7 1
lineage5.2 2
lineage2.2.1.1 5
La3;lineage2 1
lineage4.9;lineage7 2
M.canetti;lineage4.9 5
lineage4.2;lineage4.9 3
lineage2.1 4
lineage6.1.3 2
M.canetti;lineage2.1;lineage4.9 24
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 10
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.2 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La1.7.1 2
La3;M.canetti;lineage3.1 1
La1.7;M.canetti;lineage4.9 3
M.canetti;lineage2.2 3
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.2 4
M.canetti;lineage4.9;lineage9 1
lineage1.1.3.1 1
17
lineage4.5;lineage4.9 1
lineage1.2.1.2 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La1.2.BCG 1
lineage4.9;lineage6.3 6
La1.7;lineage4.9 8
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2 1
lineage1.1.2 1
lineage6.3.1 1
M.canetti;lineage2.1;lineage4 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La2;lineage2.2 1
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage4.9 12
lineage4.1.2 1
La3;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.8 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 2
lineage3.1.2.1;lineage3.1.2.2 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.6;La3;lineage4.9 2
lineage4.1.3 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
M.canetti;lineage1 1
La1.7 1
La1.2 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.1;lineage4.3.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.9;lineage9 3
lineage4.3.4.2.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.1.1.3 2
lineage1.1 1
lineage4.6.2.2 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.4.2 1
lineage4 2
lineage4.6.3;lineage4.9 2
lineage3;lineage4.9 2
lineage2.2.1;lineage4.9 1
lineage1.1.2;lineage4 1
lineage3 4
lineage2.2.1.2 2
lineage2.1;lineage2.2;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage2.1;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage3.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.7;lineage4.9;lineage7 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
La1.8.1 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
lineage1;lineage4.9 2
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.2.1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage6.3 2
lineage4.3.4.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage4.2 1
M.canetti;lineage2.1;lineage3 1
lineage4.1.1.1 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage1.2.2.2 1
La3;lineage2.1;lineage6.3 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.X-unk4;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage4.9;lineage6.1.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.4.1.1 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage4.1;lineage4.8 1
La2;lineage4.9;lineage9 1
lineage2;lineage4.9 1
La1.7.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 526
Geographic prevalence
Country level data for this variant is available for 49 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4817731 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
SRR13423544 Other lineage4.5 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR212025 HR-TB lineage4.9 mw
ERR3804155 Other lineage4.1.2.1 None
SRR14066533 RR-TB lineage1.1.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4819781 Other lineage2.2.1 None
ERR3797047 MDR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9119500 MDR-TB lineage5.2 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR161067 Sensitive lineage4.9 mw
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9787153 Other lineage6.1.3 None
ERR4769452 Other lineage4.9 None
ERR11044406 Sensitive lineage2.2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11050318 Sensitive lineage2.2.1 None
ERR161066 Sensitive lineage4.9 mw
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR1183106 RR-TB lineage2.2.1.1 None
SRR7240492 MDR-TB La1.7.1 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4814778 MDR-TB lineage4.9 gb
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR181824 MDR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR1184381 MDR-TB None
ERR9786843 Other None
SRR1640750 RR-TB None
SRR6789626 Other None
ERR11252736 Other lineage4.9 None
SRR18213713 HR-TB None
ERR987722 MDR-TB None
ERR4816999 Other None
SRR1196768 MDR-TB None
ERR2510641 MDR-TB lineage4.9 pk
ERR2510873 Pre-XDR-TB lineage4.9 pk
ERR2510879 Pre-XDR-TB lineage4.9 pk
ERR3335775 Pre-XDR-TB lineage4.9 pk
ERR4829133 MDR-TB lineage4.9 pk
ERR4829962 MDR-TB lineage4.9 pk
ERR4829975 Pre-XDR-TB lineage4.5;lineage4.9 pk
ERR3276023 Sensitive lineage1.2.1.2 nl
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR13180420 RR-TB lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675385 Other La1.7;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR069978 HR-TB lineage2.2.2 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR6046046 Other lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR18003019 Other lineage2.2.1 None
SRR6046878 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR26399973 Other La3;lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR5162090 RR-TB lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6046141 Other lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797015 HR-TB lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6045555 Other lineage4.9 None
ERR4818996 Sensitive lineage4.9 gb
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR7068872 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR10969125 HR-TB lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4829245 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR9028479 Pre-XDR-TB lineage4.9 None
ERR4816878 HR-TB lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR11044405 Sensitive lineage2.2.1 None
SRR6045219 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR7131153 Sensitive lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3283032 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR400336 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3283011 Other La3;lineage4.9 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR400326 Other lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR688041 Pre-XDR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR10969118 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4772225 Other La1.2 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR14782405 HR-TB lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR13861400 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12006524 Sensitive lineage1.2.1.2 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
ERR2513081 Sensitive lineage4.9 gb
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR190329 Sensitive lineage4.9 mw
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2510748 Sensitive lineage4.9 it
SRR9028492 Pre-XDR-TB lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR3283018 HR-TB lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR6359082 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786682 Other lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4816743 MDR-TB lineage4.9 gb
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
DRR188519 Other lineage4.4.2 None
SRR6964576 MDR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
ERR9786671 Other None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR4796577 HR-TB None
ERR4407463 HR-TB None
ERR9787197 Other None
ERR688030 Pre-XDR-TB lineage4.9 pk
ERR1034598 Pre-XDR-TB lineage4.9 pk
ERR1034609 Pre-XDR-TB lineage4.9 pk
ERR2510301 MDR-TB lineage4.9 pk
ERR2510299 Pre-XDR-TB lineage4.9 pk
ERR2510315 Pre-XDR-TB lineage4.9 pk
ERR2510340 MDR-TB lineage3;lineage4.9 pk
ERR2510384 Pre-XDR-TB lineage4.9 pk
ERR5897078 Pre-XDR-TB lineage2.2.1;lineage4.9 None
ERR5897082 Pre-XDR-TB lineage4.9 None
ERR5897084 Pre-XDR-TB lineage3;lineage4.9 None
ERR10969106 HR-TB lineage4.9 None
ERR752229 Other lineage4.5 None
SRR7131060 Sensitive lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
SRR3675441 RR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR473347 Sensitive lineage4.9 mw
ERR221543 Sensitive lineage4.9 mw
ERR4800341 HR-TB lineage3 None
SRR1175127 Other lineage2.2.1.2 None
SRR24114356 MDR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR216935 Sensitive lineage4.9 mw
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675270 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR4818929 HR-TB lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR161117 Sensitive lineage4.9 mw
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4821053 RR-TB lineage3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4798504 RR-TB lineage3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR4820773 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR3675455 Sensitive lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9119669 MDR-TB lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR11051002 Sensitive lineage2.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR21689984 Sensitive lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046133 HR-TB lineage4.9 None
ERR245736 Sensitive lineage4.9 mw
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR176778 HR-TB lineage4.9 None
ERR1063879 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6046308 Sensitive lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR7068949 Sensitive lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR21708939 Sensitive lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR6785268 Sensitive lineage4.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675522 Other lineage4.9 None
ERR2510387 MDR-TB lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR176779 HR-TB lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR3283042 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR8552929 Pre-XDR-TB lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR2446213 Sensitive lineage4.9 nl
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR7069559 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675457 Other lineage4.9 None
ERR473332 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR3283040 HR-TB lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR11044149 Sensitive lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3468607 RR-TB lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR2509673 Other lineage2.2.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR7361913 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR7068973 Sensitive lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR22048410 Sensitive lineage4.3.3 None
SRR22251329 Other lineage2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283021 MDR-TB lineage4.9 None
ERR12544073 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR216936 Sensitive lineage4.9 mw
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR11044041 Sensitive lineage2.2.1 None
ERR9786617 Other lineage4.1.1.1 None
ERR4811493 HR-TB lineage4.9 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR9786642 Other lineage4.1.2.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR234659 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR28046162 HR-TB lineage1.2.2.2 None
SRR25827682 Other None
SRR3675236 Other None
SRR12708416 Sensitive None
ERR2510392 Pre-XDR-TB lineage4.9 pk
ERR2510398 Pre-XDR-TB lineage4.9 pk
ERR2510411 Pre-XDR-TB lineage4.9 pk
ERR2510414 Pre-XDR-TB lineage4.9 pk
ERR2510434 Pre-XDR-TB lineage4.9 pk
ERR2510440 MDR-TB lineage4.9 pk
ERR2510558 Pre-XDR-TB lineage4.9 pk
ERR2510580 Pre-XDR-TB lineage4.9 pk
ERR2510588 Pre-XDR-TB lineage4.9 pk
ERR2517464 Sensitive lineage4.9 nl
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11082239 Sensitive lineage2.2.1 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR3675507 RR-TB lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR2707213 Sensitive lineage4.9 cd
SRR1184388 Other lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR26112017 Sensitive lineage2.2.1 None
ERR2510427 Pre-XDR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1162740 Other lineage4.1.2.1 None
SRR1792478 HR-TB La1.7.1 None
ERR4816466 HR-TB lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
ERR2513001 Sensitive lineage4.9 gb
SRR1180226 HR-TB lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR9907701 MDR-TB lineage4.9 None
SRR26399239 Sensitive lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2706987 MDR-TB lineage4.9 cd
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR3275172 Sensitive lineage4.9 nl
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR21690794 Sensitive lineage1.2.1.2 None
ERR4819498 Sensitive lineage4.9 gb
SRR3675580 Sensitive lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR8975627 HR-TB lineage4.9 None
ERR2514552 Sensitive lineage3 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2510482 MDR-TB lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
ERR4769474 HR-TB lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR12006550 Other lineage1.2.1.2 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4816551 MDR-TB lineage4.1.1.3 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR3797070 Other lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4829072 RR-TB lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9786421 Other lineage4.1.2.1 None
ERR323037 Other lineage4.9 None
ERR10969161 HR-TB lineage2;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4821284 Sensitive lineage4.9 gb
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None