Rv0667 - c.1290G>C


Drug resistance types
9 Sensitive 44 RR-TB 29 HR-TB 51 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 60 Other
lineage Counts
lineage Count
lineage4.9 41
lineage4.8 12
lineage3.1.2.1 1
M.canetti;lineage4.9 3
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1.2.1.1 1
lineage4.3.3 2
lineage2.2.1.2 2
lineage4.9;lineage7 5
lineage4.3.4.2.1 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage2.2.1 15
lineage3;lineage4 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.9;lineage6.3 2
lineage4.4.1.1 3
lineage4.6.1.1 1
lineage3 5
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.9;lineage6.1.3 1
lineage4.3.4.2 2
lineage3.1.2.2 1
M.canetti;lineage1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7;M.canetti;lineage4.9 4
La1.7;lineage4.9 7
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.6.4;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.4.1.1.1 2
lineage5.2 2
lineage1.2.2.2 1
lineage4.1.1.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage4.3.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
4
La1;lineage4.9 1
lineage4.8.1 2
lineage4.1.1.3.1 2
lineage6.1.1 2
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.7;lineage4.9;lineage7 3
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 2
lineage4 2
lineage4.9;lineage9 2
lineage4.1.2.1 3
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
lineage2.2 3
lineage4.2.1 1
lineage5 1
La2;lineage4.9 1
lineage4.1.1.3.1;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.7 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
La3;lineage4.9 1
La1.2.BCG 1
lineage2.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.2.2.2 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 1
lineage5.1.1 1
lineage2.2.1.2;lineage7 1
La2;lineage4.9;lineage9 1
lineage4.3.1 1
La1.8.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage3.1.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
spoligotype Counts
spoligotype Count
None 196
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6359082 Other lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR6359074 HR-TB lineage4.9 None
SRR3675441 RR-TB lineage4.9 None
ERR4819011 Other lineage3.1.2.1 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR1175127 Other lineage2.2.1.2 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR176675 Sensitive lineage4.3.4.2.1 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR13423649 Other lineage2.2.1 None
SRR6046046 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4818393 RR-TB lineage3;lineage4 None
ERR4817896 HR-TB lineage2.2.1 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4817667 HR-TB lineage4.8 None
SRR5341400 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1172310 MDR-TB lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR6045548 Other lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR3275709 HR-TB lineage3 nl
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4769439 HR-TB lineage4.9 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
SRR6046593 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR6197043 MDR-TB lineage4.3.4.2 None
ERR4819528 RR-TB lineage3 None
ERR4829816 RR-TB lineage4.4.1.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675280 RR-TB lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR978767 RR-TB lineage4.8 None
SRR1183111 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR4769444 HR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
SRR11342647 MDR-TB lineage4.1.1.3 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4821222 Other lineage4.3.2.1 None
SRR11342655 MDR-TB lineage2.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR234659 HR-TB None
ERR4769497 Other La1;lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4822261 RR-TB lineage2.2.1 None
ERR2514327 HR-TB lineage4.8 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5341330 Other lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2513830 RR-TB lineage4.8 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR4816151 Other lineage4.8 None
ERR387051 RR-TB lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR978765 RR-TB lineage4.8 None
ERR4798823 HR-TB lineage4 None
ERR3799304 RR-TB lineage6.1.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR4819706 MDR-TB lineage4.3.4.2 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR6046382 RR-TB lineage2.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR4818259 RR-TB lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR867541 MDR-TB lineage4.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4816967 Other lineage5 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR867567 RR-TB lineage3 None
ERR4817964 RR-TB lineage4.1.2.1 gb
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR4819546 HR-TB lineage3 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR4819305 Sensitive lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR3675222 Other La1.7 None
ERR4769450 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR20970016 Other lineage2.2 None
ERR4769442 Sensitive lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
ERR4796577 HR-TB None
SRR7535086 Other None
ERR987722 MDR-TB None
ERR4820151 Other lineage4.8 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR18002941 RR-TB lineage2.2.1 None
SRR6046492 Other lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6045217 Other lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR6832787 Other lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5007169 RR-TB lineage4.8.2 None
SRR3675446 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6045347 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR3675267 Other La1.7;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR751345 Other lineage5.1.1 None
SRR11342653 MDR-TB lineage2.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR2446566 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4829039 RR-TB lineage4.3.1 None
SRR8217918 HR-TB lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR3468488 Other La1.8.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4820410 RR-TB lineage3.1.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR19303820 RR-TB lineage4.8 None
SRR5485614 RR-TB lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR4769452 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None