Rv0667 - c.1290G>C
Drug resistance types
17 Sensitive
58 RR-TB
76 HR-TB
21 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| 66 | |
| lineage4.4.1.1 | 4 |
| lineage4 | 18 |
| lineage5.1.1 | 2 |
| lineage5.2 | 2 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1 | 16 |
| La2 | 1 |
| lineage4.9 | 27 |
| lineage4.3.4 | 1 |
| La1.8.1 | 4 |
| lineage6.1.1 | 2 |
| lineage4.9;La1.3 | 1 |
| La1 | 1 |
| La1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3 | 16 |
| lineage3.1.2 | 1 |
| lineage2.2 | 3 |
| lineage4.3.4.2 | 2 |
| lineage4.6.1.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.8 | 10 |
| lineage4.1.2.1 | 5 |
| lineage2.2.1.2 | 2 |
| lineage4.3.3 | 4 |
| lineage3.1.3 | 1 |
| lineage2.2.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage1.2.2 | 1 |
| lineage4.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.2.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage5 | 1 |
| lineage3.1 | 1 |
| lineage2.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage1.1.1 | 2 |
| lineage6 | 1 |
| lineage1 | 1 |
| lineage4.1.1 | 2 |
| lineage1.1.2 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.8.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 228 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4830353 | Other | None | SRR6046644 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR502524 | HR-TB | La2 | None | ERR323039 | HR-TB | None | SRR7535086 | Other | None | SRR8217918 | HR-TB | None | ERR323053 | HR-TB | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR133986 | HR-TB | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR387051 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4187604 | RR-TB | La1.8.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798406 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR4811493 | HR-TB | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6359045 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | None | ERR751345 | Other | lineage5.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1174897 | HR-TB | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1172310 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR14782405 | HR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR16134492 | RR-TB | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR4814841 | Other | lineage4.1 | None | ERR158583 | HR-TB | None | SRR3675502 | Other | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | ERR4815394 | RR-TB | lineage4.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675501 | HR-TB | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675270 | HR-TB | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | SRR3675284 | HR-TB | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675456 | HR-TB | None | ERR176740 | HR-TB | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675510 | Other | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816982 | Other | lineage4 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816151 | Other | lineage4.8 | None | ERR4816183 | Other | None | SRR3675552 | RR-TB | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675550 | Other | None | ERR4816476 | Other | lineage3.1.2.1 | None | SRR3675555 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212123 | Other | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR3275709 | HR-TB | lineage3 | nl | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816756 | RR-TB | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR1035162 | Other | None | ERR4818126 | RR-TB | lineage1 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR234659 | HR-TB | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | ERR2509885 | RR-TB | lineage3 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818948 | Sensitive | lineage4.3.3 | gb | SRR5007165 | MDR-TB | lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341400 | HR-TB | lineage4 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819305 | RR-TB | lineage4.9 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341456 | Other | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR5485614 | RR-TB | None | ERR4819528 | RR-TB | lineage3 | None | SRR5341418 | Other | None | ERR4819546 | HR-TB | lineage3 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341432 | HR-TB | lineage4 | None | ERR2514514 | RR-TB | lineage3 | gb | ERR1035138 | MDR-TB | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | ERR4820833 | HR-TB | None | ERR4820151 | RR-TB | lineage4.8 | None | SRR5341330 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR5341470 | HR-TB | None | SRR5535933 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821796 | Other | lineage4.1.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4822104 | RR-TB | lineage3 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | SRR6045399 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None |
|---|
