Rv0667 - c.1290G>C
Drug resistance types
19 Sensitive
35 RR-TB
35 HR-TB
35 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
73 Other
lineage Counts
| lineage | Count |
|---|---|
| La1;lineage4.9 | 1 |
| lineage4.4.1.1 | 3 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.8.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.9 | 45 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.8 | 12 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7 | 2 |
| lineage6.1.1 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1 | 15 |
| lineage2.2.1.2 | 2 |
| lineage4.3.3 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.1.3.1 | 2 |
| La1.7;lineage4.9 | 7 |
| lineage3;lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.2.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.8.2 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.3.4.2 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.2.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.9;lineage7 | 5 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.2.BCG | 1 |
| lineage2.2 | 3 |
| 4 | |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage5.1.1 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage3 | 5 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage5 | 1 |
| M.canetti;lineage1 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 3 |
| lineage4.3.1 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage3.1.2.2 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage5.2 | 2 |
| La1.8.1 | 1 |
| M.canetti;lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 200 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4769497 | Other | La1;lineage4.9 | None |
| ERR4818851 | RR-TB | lineage4.4.1.1 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| SRR11342693 | MDR-TB | lineage4.8.1 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| ERR867570 | RR-TB | lineage4.9 | None |
| SRR6045217 | Sensitive | lineage4.9 | None |
| SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR3445504 | Other | lineage4.9;lineage6.1.3 | None |
| ERR4798823 | HR-TB | lineage4 | None |
| ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
| ERR4820151 | Other | lineage4.8 | None |
| SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
| ERR4769444 | HR-TB | lineage4.9 | None |
| SRR3675222 | Other | La1.7 | None |
| SRR1172310 | HR-TB | lineage4.9 | None |
| ERR4769439 | HR-TB | lineage4.9 | None |
| ERR9787014 | Other | lineage6.1.1 | None |
| SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None |
| ERR6358755 | Other | lineage4.6.1.1 | None |
| ERR2027209 | MDR-TB | lineage1.2.1.1 | None |
| ERR4822261 | RR-TB | lineage2.2.1 | None |
| SRR1175127 | Other | lineage2.2.1.2 | None |
| ERR387051 | Other | lineage4.9 | None |
| SRR11342649 | MDR-TB | lineage4.3.3 | None |
| SRR18002941 | RR-TB | lineage2.2.1 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| SRR19303820 | RR-TB | lineage4.8 | None |
| ERR4817896 | HR-TB | lineage2.2.1 | None |
| ERR4819305 | Sensitive | lineage4.9 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| SRR5007167 | RR-TB | lineage4.1.1.3.1 | None |
| SRR5535933 | Other | lineage4.9 | None |
| ERR2513830 | RR-TB | lineage4.8 | None |
| SRR3675501 | Other | La1.7;lineage4.9 | None |
| ERR4818393 | RR-TB | lineage3;lineage4 | None |
| SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None |
| SAMEA3501073 | RR-TB | lineage4.8 | None |
| SRR11342687 | RR-TB | lineage4.2.2.2 | None |
| SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR20969731 | Other | lineage2.2.1 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| ERR4830353 | Other | La1.7 | None |
| SRR5007169 | RR-TB | lineage4.8.2 | None |
| SRR3675446 | RR-TB | lineage4.9 | None |
| SRR6046492 | Other | lineage4.9 | None |
| ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
| SRR5341330 | Other | lineage4.9 | None |
| ERR2446566 | Other | lineage4.9 | None |
| ERR212123 | Other | lineage4.9 | None |
| SRR6045347 | Other | lineage4.9 | None |
| SRR13423649 | Sensitive | lineage2.2.1 | None |
| SRR11342660 | MDR-TB | lineage2.2.1 | None |
| ERR4819706 | MDR-TB | lineage4.3.4.2 | None |
| ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR161037 | Other | lineage4.9 | None |
| SRR29231479 | RR-TB | lineage4.9 | None |
| SRR11342653 | MDR-TB | lineage2.2.1 | None |
| ERR2041726 | MDR-TB | lineage4.1.2.1 | None |
| ERR9896153 | RR-TB | lineage4.4.1.1 | None |
| ERR867541 | MDR-TB | lineage4.2.1 | None |
| ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
| SRR5007193 | RR-TB | lineage4.1.1.3.1 | None |
| ERR4797201 | Other | lineage1.2.2.2 | None |
| ERR978767 | RR-TB | lineage4.8 | None |
| ERR4596910 | Sensitive | lineage4.9 | None |
| ERR4820410 | RR-TB | lineage3.1.1 | None |
| SRR3675441 | Other | lineage4.9 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None |
| ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
| SRR3675488 | Other | La1.7;lineage4.9 | None |
| ERR3799304 | Other | lineage6.1.1 | None |
| SRR1183111 | HR-TB | lineage4.9 | None |
| SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
| ERR2041725 | MDR-TB | lineage4.1.2.1 | None |
| ERR6359082 | Other | lineage4.9 | None |
| ERR4798262 | HR-TB | La1.2.BCG | None |
| SRR20970016 | Other | lineage2.2 | None |
| SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None |
| ERR987722 | MDR-TB | None | |
| ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None |
| ERR4769442 | Sensitive | lineage4.9 | None |
| SRR1180226 | HR-TB | lineage4.9 | None |
| SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
| SRR6832787 | Sensitive | lineage2.2.1 | None |
| SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
| SRR6046382 | Sensitive | lineage2.2.1 | None |
| ERR4796577 | HR-TB | None | |
| ERR4817964 | RR-TB | lineage4.1.2.1 | gb |
| SRR11342662 | MDR-TB | lineage4.8.1 | None |
| SRR3675385 | Other | La1.7;lineage4.9 | None |
| SRR3675270 | Other | lineage4.9 | None |
| SRR12142339 | HR-TB | lineage2.2.1 | None |
| ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None |
| SRR1735596 | RR-TB | lineage4.9 | None |
| ERR751345 | Other | lineage5.1.1 | None |
| SRR5341400 | Sensitive | lineage4.9 | None |
| SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| SRR6045053 | Other | lineage4 | None |
| SRR20969708 | HR-TB | lineage2.2 | None |
| SRR6046046 | Other | lineage4.9 | None |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| SRR3675492 | Other | La1.7;lineage4.9 | None |
| ERR323039 | HR-TB | La2;lineage4.9 | None |
| SRR6045548 | Sensitive | lineage4.9 | None |
| ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4818259 | RR-TB | lineage4.1.1.1 | None |
| SRR14801759 | HR-TB | La1.7;lineage4.9 | None |
| SRR3675267 | Other | La1.7;lineage4.9 | None |
| ERR176675 | Sensitive | lineage4.3.4.2.1 | None |
| ERR867567 | RR-TB | lineage3 | None |
| ERR9786444 | Sensitive | lineage4.8 | None |
| SRR14782054 | Other | lineage4.9 | None |
| ERR6197043 | MDR-TB | lineage4.3.4.2 | None |
| SRR3675461 | RR-TB | lineage4.9 | None |
| SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR4816967 | Other | lineage5 | None |
| SRR15014655 | Other | M.canetti;lineage1 | None |
| ERR6359074 | HR-TB | lineage4.9 | None |
| SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None |
| SRR11342636 | MDR-TB | lineage4.3.3 | None |
| ERR867523 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR3675280 | RR-TB | lineage4.9 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| SRR6045399 | Other | M.canetti;lineage4.9 | None |
| ERR4829039 | RR-TB | lineage4.3.1 | None |
| SRR8217918 | HR-TB | lineage4.9 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| ERR4819546 | HR-TB | lineage3 | None |
| SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None |
| SRR3675449 | Other | M.canetti;lineage4.9 | None |
| SRR1172796 | Sensitive | lineage2.2.1.2 | None |
| ERR2660539 | Other | lineage4.9 | None |
| SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None |
| SRR11342647 | MDR-TB | lineage4.1.1.3 | None |
| ERR4799513 | HR-TB | lineage2.2 | None |
| ERR4819011 | Other | lineage3.1.2.1 | None |
| SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| ERR4816151 | Sensitive | lineage4.8 | None |
| ERR4821222 | Other | lineage4.3.2.1 | None |
| SRR11342655 | MDR-TB | lineage2.2.1 | None |
| ERR4800527 | MDR-TB | lineage2.2.1 | None |
| SRR11662690 | HR-TB | lineage4.9 | None |
| SRR5341456 | Other | lineage4.9 | None |
| ERR4811493 | HR-TB | lineage4.9 | None |
| SRR1735598 | RR-TB | lineage4.9 | None |
| ERR3445502 | Sensitive | lineage4.9;lineage7 | None |
| ERR4188322 | Other | lineage4.6.4;lineage4.9 | None |
| ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
| SRR6046878 | Other | lineage4.9 | None |
| ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
| SRR3675510 | Sensitive | La3;lineage4.9 | None |
| ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| SRR5485614 | RR-TB | lineage4.9 | None |
| SRR5341373 | Other | lineage4.9 | None |
| ERR978765 | RR-TB | lineage4.8 | None |
| ERR2514327 | HR-TB | lineage4.8 | None |
| ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None |
| SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
| ERR4829816 | RR-TB | lineage4.4.1.1 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR4817667 | HR-TB | lineage4.8 | None |
| SRR3675495 | Other | lineage2.1;lineage4.9 | None |
| SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
| ERR3275709 | HR-TB | lineage3 | nl |
| SRR1174897 | MDR-TB | lineage4.9;lineage9 | None |
| SRR6046593 | Other | lineage4.9 | None |
| SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None |
| ERR4769450 | Other | lineage4.9 | None |
| ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
| ERR4797588 | MDR-TB | lineage3 | None |
| SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| SRR7535086 | Other | None | |
| ERR4819528 | RR-TB | lineage3 | None |
| ERR6358951 | Sensitive | lineage4.9 | None |
| ERR978766 | RR-TB | lineage4.8 | None |
| ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None |
| ERR4872094 | MDR-TB | lineage5.2 | None |
| ERR3468488 | Other | La1.8.1 | None |
| ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None |
| SRR29096150 | Other | lineage4.9 | None |
| SRR3675456 | RR-TB | lineage4.9;lineage7 | None |
| ERR4769452 | Other | lineage4.9 | None |
| SRR6046225 | Other | lineage4.9;lineage6.3 | None |
| SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
| ERR9119500 | MDR-TB | lineage5.2 | None |
| ERR234659 | Other | None |
