EBG00000313339 - n.517A>G


Drug resistance types
144 Sensitive 15 RR-TB 84 HR-TB 23 MDR-TB 17 Pre-XDR-TB 0 XDR-TB 113 Other
lineage Counts
lineage Count
lineage2.2.1.2 3
lineage4.9 201
lineage4.3.4 2
lineage4.3.4.2.1 8
lineage2.2.1 36
4
La1.7.X-unk4;lineage4.9 1
La1.7;lineage4.9;lineage7 3
lineage3.1.2.1 1
La3;M.canetti;lineage4.9 1
lineage4 4
La1.3 4
lineage4.8 6
La2;lineage4.9 1
lineage4.2.1 6
lineage4.6.1.1 2
lineage3.1.3 1
La1.7;lineage3.1;lineage4 1
lineage2.2.2 1
lineage4.5 1
lineage4.1.2.1 6
M.canetti;lineage1 1
lineage3 6
lineage4.3.4.1 2
La1.7.1;lineage4.9 1
La2 1
La1.8.1 6
La3;lineage4.9 6
lineage2.2.1.1 1
lineage1.1.3.1 1
lineage4.4.1.1 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.9;lineage7 2
lineage4.1.2 2
lineage2.2 1
La1.2.BCG 2
lineage2.2.1;lineage4.9 3
lineage4.9.1 2
lineage4.3.3 4
La1.7;lineage4.9 8
La1;lineage4.9 4
lineage5.2 2
La1.7;lineage4.9;lineage6 1
lineage4.2.2.2 1
lineage4.4.1.1.1 2
La2;lineage2.2 1
lineage2;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
lineage2.2.1;lineage4 1
lineage4.1.1.3 3
lineage2.2;lineage4.9 1
lineage4.4.2 1
lineage4.4.1.2 1
La1.2 2
lineage1.1.2 3
lineage6 2
lineage4.8.1 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage3.1.1 1
lineage4.9;lineage6.1.3 1
lineage4.7 1
M.canetti;lineage4.9;lineage9 1
lineage2.2;lineage4 1
lineage2.1;lineage4.9 1
lineage4.3.2.1 3
lineage1;lineage4.9 1
lineage1.1.1 2
La1.7.1;La1.7.X-unk4 1
La1;lineage2;lineage4.9 1
lineage1.2.2.2 1
lineage6.1.3 2
La1.7.1 1
lineage4.4 2
La1.6 1
spoligotype Counts
spoligotype Count
None 396
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1175127 Other lineage2.2.1.2 None
ERR4819357 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1180375 Sensitive lineage4.9 None
ERR4798823 HR-TB None
ERR473323 HR-TB lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR4769554 RR-TB lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR5341455 Sensitive lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR6045053 Other lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
ERR4769408 Other La1.3 None
ERR176741 Other lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR16156775 Other lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR752229 Other lineage4.5 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR15014655 Other M.canetti;lineage1 None
ERR926161 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR9786076 Sensitive lineage3 None
SRR6511621 Sensitive lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR3273109 HR-TB lineage4 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR13888750 Other La2 None
SRR1183054 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4596910 Sensitive lineage4.9 None
SRR5431730 Other La1.8.1 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR5341453 Other lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR12416842 HR-TB lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR926164 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR108140 Sensitive lineage4.4.1.1 za
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR7236330 Other La1.8.1 None
SRR14782405 HR-TB lineage4.9 None
SRR7645899 Other lineage2.2.1 None
SRR7645906 Other lineage2.2.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR9971270 RR-TB lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
SRR6045158 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR7240033 Other La1.8.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR9970980 Other lineage4.1.2 None
SRR1180399 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR11972367 Sensitive lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR1915485 Other La1.2.BCG None
ERR970413 MDR-TB lineage2.2.1 None
SRR6046253 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
ERR4769514 Other La1.3 None
SRR11662690 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR7646018 MDR-TB lineage4.2.1 None
SRR6045217 Sensitive lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
SRR1175513 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
SRR7535082 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR4796577 HR-TB None
ERR926157 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4769444 HR-TB lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR7069922 Other lineage2.2.1 None
SRR7069931 Other lineage4.2.2.2 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180440 Other lineage4.9 None
ERR1063896 Sensitive None
SRR1180391 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR6358979 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR11466061 Sensitive lineage4.9.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR6045548 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
SRR1181586 Sensitive lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
ERR216965 Sensitive lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR212123 Other lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR4769427 Other La1.2 None
ERR161039 Sensitive lineage4.3.4 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR4819051 Sensitive lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR10315567 Other lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR11462861 Other La1.8.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR11465015 Sensitive lineage4.3.4.2.1 None
SRR1180977 Sensitive lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR9787336 RR-TB lineage6 None
SRR1181349 Sensitive lineage4 None
SRR1172885 HR-TB lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2 None
SRR20969708 HR-TB lineage2.2.1 None
ERR6358951 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR3675246 Other lineage4.9 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9970979 Sensitive lineage4.8 None
ERR473332 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR1175512 Sensitive lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR5341467 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341298 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045892 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR6359070 Sensitive lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR4818536 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR1173310 Other lineage3.1.1 None
SRR6046141 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR7645928 Other lineage4.7 None
ERR176651 Other lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR18912069 Other lineage4.1.2.1 None
SRR1180345 Other lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR1172807 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR1159378 Other lineage4.9 None
SRR1173719 Other lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR1791747 Other La1.8.1 None
ERR11465604 HR-TB lineage4.8.1 None
ERR6866410 Sensitive lineage4.9 None
ERR11466070 Sensitive lineage4.3.4.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR12708418 HR-TB lineage2.2.1 None
ERR323107 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR29096276 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR4817554 Other lineage1.1.1 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR4769436 Other La1.3 None
ERR245675 Sensitive lineage1.1.2 None
ERR4769421 Other La1.2 None
SRR1180148 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR5341366 Sensitive lineage4.9 None
ERR4769495 Other La1.3 None
SRR14801749 HR-TB lineage4.9 None
ERR4810624 HR-TB lineage2.2.1 None
SRR1181283 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR161037 Other lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
SRR7496471 Sensitive lineage4 None
ERR3283011 Other La3;lineage4.9 None
ERR9786639 Sensitive lineage4.8 None
SRR10315551 Sensitive lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR10808668 Sensitive lineage2.2.1 None
SRR12708392 Other lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1180319 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR108471 HR-TB lineage4.9 None
ERR9787362 Sensitive lineage6 None
ERR212138 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR20970016 Other lineage2.2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR16627752 RR-TB lineage4.4 None
ERR473367 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR4817434 Other lineage3 None
SRR5341319 Other lineage3 None
SRR5341306 Pre-XDR-TB lineage4.4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7755657 Other lineage4.8 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR16156697 RR-TB lineage2.2.1 None
ERR3797046 HR-TB lineage4.9 None
ERR1023236 Other lineage6.1.3 None
SRR1180413 Sensitive lineage4.9 None
ERR323085 Sensitive lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR11268038 Other La1.6 None
ERR6359082 Other lineage4.9 None
ERR736831 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
ERR4817069 RR-TB None
SRR1181368 Other lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1181214 Other lineage4.9 None
SRR6044952 Other lineage4.9 None
SRR29096203 Sensitive lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4819314 Other lineage1.1.1 None
SRR1181325 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None