Rv3596c - c.159G>T
Drug resistance types
27 Sensitive
4 RR-TB
6 HR-TB
9 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 24 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.8.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 2 |
| lineage2.2.1;lineage4 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4 | 3 |
| lineage4.8 | 1 |
| lineage2.2.1 | 1 |
| lineage2.2.1.2 | 2 |
| M.canetti;lineage4.2 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.3.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 65 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR369161 | Sensitive | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR4769514 | Other | La1.3 | None | SRR5341456 | Other | lineage4.9 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR4178226 | Sensitive | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1181349 | Sensitive | lineage4 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1238558 | Other | lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR28868888 | Other | lineage1.1.3.2 | None | SRR29097066 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None |
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