Rv0668 - c.1716T>C


Drug resistance types
25 Sensitive 18 RR-TB 44 HR-TB 85 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 76 Other
lineage Counts
lineage Count
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.9 84
lineage4.9;lineage6.3 1
La1.7;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage1.2.1.2 1
lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage6.3 1
La3;lineage4.9 12
lineage2.2.1.2 2
lineage4.2;lineage4.9 3
lineage6.1.3 1
lineage4.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage2.1;lineage4.9 19
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage4.2 1
lineage4.1.2.1 5
lineage2.2.1.1 2
La1.7.1 2
lineage2.2.1 7
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.2 3
M.canetti;lineage4.9 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
lineage2.2 3
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage3 4
La1.7;lineage4.9;lineage7 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.6.1.1 1
La1.8.1 2
lineage4.1;lineage4.8 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.5 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4 4
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage1.1 1
La3;lineage4 1
1
La3;M.canetti;lineage4.9 1
La1.2.BCG 1
La1.7;M.canetti;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
La3;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
La1.7.X-unk4;lineage4.9 1
lineage2.2.2 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage1.1.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1;lineage4.9 1
La3;lineage4.3.4 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 251
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR363498 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR6045706 Other lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
ERR4819877 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675387 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR8665994 RR-TB lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR363502 Other lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR363447 Other lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR373947 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR3283018 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1034634 HR-TB lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR3283021 MDR-TB lineage4.9 None
ERR363479 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4815815 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR1165584 Other lineage4.1.2.1 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR363446 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6046611 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR363449 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369158 Other lineage4.9 None
ERR363421 Other lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR4818929 HR-TB lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675482 RR-TB lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4596902 MDR-TB lineage3 None
ERR3283031 Other La3;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR363506 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR3675269 RR-TB lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR067712 Sensitive lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR369161 Sensitive lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR3797023 MDR-TB La1.8.1 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR349265 Other lineage4.9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR400345 Other lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4811031 Other lineage4.5 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR349264 Other lineage4.9 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR363490 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4178226 Sensitive lineage4 None
ERR363453 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR4819241 Other lineage4.9 None
SRR6044780 Sensitive lineage4.9 None
ERR349266 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161037 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR369159 Other lineage4.9 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283028 Other La3;lineage4 None
ERR4769442 Sensitive lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR349300 Other lineage4.9 None
ERR369162 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR4817998 Other lineage3 None
ERR373945 Other lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1165506 Other lineage4.1.2.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR6359070 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR20969708 HR-TB lineage2.2 None
ERR4820773 HR-TB lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR4178309 Other lineage4.1.2.1 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR4819314 HR-TB lineage1.1.1 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR369163 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR373946 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR6865502 Sensitive lineage4 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR3797063 Other La3;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR349299 Other lineage4.9 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4816551 MDR-TB lineage4.1.1.3 None
SRR9971270 RR-TB lineage2.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6045371 Other lineage4.9 None