EBG00000313339 - n.2599A>C
Drug resistance types
17 Sensitive
3 RR-TB
35 HR-TB
5 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
50 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 37 |
| lineage4.3.4 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.8.1 | 3 |
| lineage4.6.1.1 | 2 |
| lineage4.8 | 3 |
| lineage1.1.2 | 1 |
| La1.2;La1.8.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 3 |
| La1.7.1 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1.1 | 3 |
| La1.7;lineage4.9 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.9;lineage7 | 3 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.4 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1.2 | 2 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage2.2 | 3 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage2.2.1 | 7 |
| La1.6;La3;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.3.4.1 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4 | 1 |
| La1.2 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage1.1.1 | 1 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 113 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818395 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR387051 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR7240476 | Other | La1.8.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR14801854 | Sensitive | lineage4.8 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR7240538 | Other | La1.7.1 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR4769452 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR16278292 | Other | La1.4 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR10726045 | MDR-TB | lineage4.3.3 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR2660539 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1791725 | Other | La1.8.1 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046878 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR6045053 | Other | lineage4 | None | ERR4769427 | Other | La1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR7240526 | Other | La1.8.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR176779 | HR-TB | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR3743401 | MDR-TB | lineage2.2.1 | None | ERR176651 | Other | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
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