Rv0529 - c.546T>C
Drug resistance types
18 Sensitive
0 RR-TB
89 HR-TB
3 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.1.1 | 1 |
| 89 | |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4 | 15 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1 | 4 |
| lineage3 | 1 |
| lineage4.9 | 6 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2 | 4 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.2 | 1 |
| La1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage9;lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 144 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675482 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161033 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675222 | Other | None | SRR3675383 | HR-TB | None | SRR3675234 | Other | None | ERR181824 | HR-TB | lineage4 | None | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR2503379 | Other | lineage4.1.2 | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR5341456 | Other | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2693230 | Other | None | SRR5341330 | HR-TB | None | ERR2693231 | Other | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | ERR278594 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6325444 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6046015 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045217 | Other | lineage4 | None | SRR6046225 | HR-TB | None | SRR6046397 | Other | None | SRR6046362 | HR-TB | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046492 | Other | None | ERR502510 | Sensitive | lineage4 | None | SRR6046514 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325442 | HR-TB | None | ERR4831117 | HR-TB | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR323039 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323045 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323053 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063858 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797024 | Other | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797064 | Sensitive | None | ERR4188350 | HR-TB | None | ERR3797083 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR473332 | Other | lineage4 | None | ERR4769521 | HR-TB | None | ERR4798099 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866410 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6198317 | Other | La1.2 | None | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR6359045 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | SRR10808399 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | SRR10809074 | Sensitive | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1172310 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1174897 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13837630 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR20970016 | Other | lineage2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None |
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