EBG00000313339 - n.1825A>G
Drug resistance types
16 Sensitive
0 RR-TB
25 HR-TB
3 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| 11 | |
| lineage2.2.1 | 5 |
| lineage4.9 | 25 |
| lineage4.2.1 | 1 |
| lineage4 | 9 |
| lineage4.4.1.2 | 1 |
| lineage4.4.2 | 1 |
| lineage2.1 | 1 |
| La1.8.1 | 1 |
| La1.3 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage2.2 | 3 |
| lineage4.1.2.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1.2 | 2 |
| La1.7.1 | 1 |
| La1.8.2 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.8 | 1 |
| lineage3 | 2 |
| lineage4.3.3 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 74 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341456 | Other | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045053 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046385 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR7496471 | Sensitive | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | DRR188519 | Other | lineage4.4.2 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6339664 | MDR-TB | lineage2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR3439441 | Other | La1.8.1 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4799025 | Pre-XDR-TB | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769450 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR736837 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR760899 | MDR-TB | lineage4.1.2.1.1 | ar | SRR1175052 | HR-TB | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR13199757 | Other | La1.7.1 | None | SRR15296921 | Other | La1.8.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR4814394 | HR-TB | lineage4.6.1.2 | gb | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR2229219 | Sensitive | lineage4.8 | None | ERR4816470 | Other | lineage3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819462 | Other | lineage4 | None |
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