Rv1630 - c.408T>C
Drug resistance types
113 Sensitive
61 RR-TB
141 HR-TB
74 MDR-TB
16 Pre-XDR-TB
0 XDR-TB
197 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.9 | 275 |
| lineage4.3.3 | 8 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 10 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1 | 46 |
| lineage4 | 10 |
| lineage4.1.2.1 | 10 |
| lineage4.8;lineage4.9 | 2 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.7 | 1 |
| lineage4.2;lineage4.9 | 3 |
| lineage2.2 | 4 |
| lineage4.1.1.3.1 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9 | 6 |
| lineage3.1 | 1 |
| 3 | |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.8 | 10 |
| lineage6.1.3 | 3 |
| lineage6.1.1 | 2 |
| lineage4.6.2.2 | 5 |
| La1.2.BCG | 4 |
| lineage3.1.2.1 | 1 |
| lineage3 | 13 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.2.1 | 6 |
| lineage4.1.2 | 3 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.9;lineage9 | 3 |
| lineage4.4 | 1 |
| La1.3 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1.1.2 | 5 |
| La1.2;La1.8.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.8.1 | 5 |
| lineage3.1.2.2 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.3.4.1 | 2 |
| lineage4.8.1 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| La1.4 | 1 |
| lineage6.1.2 | 2 |
| lineage2;lineage4 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage2.2.1.1 | 4 |
| La3;lineage4 | 1 |
| lineage4.4.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.5 | 3 |
| lineage4.6.1.1 | 2 |
| La1;lineage4.9 | 3 |
| lineage4.1.1.1 | 4 |
| M.canetti;lineage4.9 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.1.1.2 | 1 |
| La1.2 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2.1;lineage4 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 2 |
| lineage2.2.1.2 | 3 |
| lineage4.2.2.2 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.2.BCG;lineage4.9 | 1 |
| La3;lineage4.9 | 8 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.2.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.1.1.3 | 4 |
| lineage5.1.4 | 1 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.3.4 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2;lineage4 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.9;lineage7 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.9.1 | 1 |
| lineage5.1.2 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 602 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446382 | Other | lineage4 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR363446 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR28351442 | HR-TB | lineage3.1 | None | SRR12708416 | Sensitive | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR363449 | Other | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | ERR3439432 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR6046046 | Other | lineage4.9 | None | SRR5341298 | Other | lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR12015085 | Other | lineage4.8 | None | ERR363421 | Other | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR1915479 | Other | La1.2.BCG | None | SRR6832249 | Sensitive | lineage2.2.1 | None | SRR5535933 | Other | lineage4.9 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4798504 | RR-TB | lineage3 | None | ERR926165 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR6045555 | Other | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR3675312 | Sensitive | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR3675446 | RR-TB | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR181887 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR400345 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3797019 | Other | La1.8.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3283032 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR349299 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR16278274 | Other | La1.4 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR6046485 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR363479 | Other | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR926161 | Sensitive | lineage4.9 | None | ERR11465333 | Sensitive | lineage4.3.4.2.1 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR987722 | MDR-TB | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR752229 | Other | lineage4.5 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR369162 | Other | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | SRR5341373 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4817998 | Other | lineage3 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR7755657 | Other | lineage4.8 | None | ERR373945 | Other | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5341330 | Other | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | ERR363499 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR3797067 | Other | La1.8.1 | None | SRR6046492 | Other | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR3675270 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR1159378 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR6046141 | Other | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR926156 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR6045548 | Other | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR4818536 | Other | lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | ERR349265 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR6045002 | RR-TB | lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR11662694 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR4811031 | Other | lineage4.5 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | SRR28119823 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR349264 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR926163 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR5341453 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR2517475 | Other | lineage4 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR6046594 | Other | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR6045503 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR1063896 | HR-TB | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR28351408 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR6045795 | Other | lineage2.2.1 | None | ERR349300 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR779852 | HR-TB | lineage4.9 | None | SAMN02585910 | RR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9786076 | Other | lineage3 | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR1173633 | Other | lineage4.9 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR6832787 | Other | lineage2.2.1 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR736848 | Other | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR26399491 | Sensitive | lineage1.1.1.1 | None | SRR14782054 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR373946 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR16156817 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR363498 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR26399255 | Sensitive | lineage2.2.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR5431730 | Other | La1.8.1 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR4798139 | RR-TB | lineage1.1.2 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR4769418 | Other | La1.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR473332 | Other | lineage4.9 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR363447 | Other | lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR6045189 | Sensitive | lineage3 | gb | SRR3675514 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None |
|---|
