Rv0668 - c.2481G>C
Drug resistance types
14 Sensitive
4 RR-TB
88 HR-TB
15 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
118 Other
lineage Counts
| lineage | Count |
|---|---|
| 111 | |
| lineage4.7 | 2 |
| lineage4.9 | 23 |
| lineage4.3.4.1 | 1 |
| lineage4 | 13 |
| lineage4.6.1.1 | 2 |
| lineage4.8 | 8 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2.1 | 11 |
| lineage6.3.1 | 3 |
| lineage4.1.3 | 2 |
| lineage3 | 4 |
| lineage2.2.1 | 16 |
| La1.2 | 1 |
| lineage1.1.2 | 3 |
| lineage2 | 3 |
| lineage4.4.1.1 | 3 |
| lineage2.2 | 4 |
| lineage4.8;La3 | 2 |
| lineage4.3.2.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1 | 2 |
| lineage4.1.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage6.2.3 | 1 |
| lineage6 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.3.3 | 3 |
| lineage3.1 | 2 |
| lineage4.5 | 1 |
| lineage2.1 | 2 |
| lineage9;lineage3.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage2.2.1;La3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| La1.8.1 | 1 |
| lineage4.1.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 250 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7496509 | Other | None | SRR7496517 | Other | None | SRR7496523 | Other | lineage4.7 | None | SRR7585435 | Other | lineage4.9 | None | ERR067681 | HR-TB | None | ERR323043 | HR-TB | None | ERR11466499 | Other | lineage4.3.4.1 | None | ERR027293 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR11049020 | Other | lineage4.8 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR133986 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797036 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797071 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797069 | Other | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3804162 | Sensitive | lineage6.3.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR403298 | HR-TB | lineage4 | None | ERR4407452 | Sensitive | lineage3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4407463 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798406 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4799025 | Pre-XDR-TB | None | ERR736874 | HR-TB | None | ERR4811105 | HR-TB | None | ERR12268496 | Sensitive | lineage4.4.1.1 | None | ERR5336148 | Other | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800341 | Other | lineage3 | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR9117709 | HR-TB | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786569 | Other | lineage4.8 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787061 | Sensitive | lineage6.2.3 | None | ERR9787165 | Other | lineage6 | None | SRR1172728 | MDR-TB | None | ERR9787197 | Other | None | ERR9787223 | Sensitive | lineage6.3.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172857 | MDR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173484 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173778 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1175090 | Other | lineage4.9 | None | SRR1175049 | RR-TB | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR12142341 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR13837813 | Other | lineage4.9 | None | SRR13591342 | HR-TB | lineage4.1.1.3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | SRR1710057 | Other | lineage2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | ERR11068570 | Other | lineage4 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR25827682 | Other | None | SRR19303884 | HR-TB | None | SRR20969731 | Other | lineage2.2.1 | None | ERR11081864 | Other | lineage3 | None | ERR11081258 | Other | lineage4.8 | None | ERR11081257 | Other | lineage4.8 | None | SRR26159043 | Other | lineage4.9 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR11138607 | Pre-XDR-TB | lineage2.2.1 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | ERR158583 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675488 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675502 | Other | None | SRR3416776 | Other | lineage2.1 | None | SRR3675222 | Other | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675501 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675311 | Other | None | SRR3675270 | HR-TB | None | ERR176751 | HR-TB | None | ERR4815752 | Other | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | SRR3675550 | Other | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | ERR4816151 | Other | lineage4.8 | None | ERR4817037 | Other | lineage4.9 | None | ERR4817060 | RR-TB | None | ERR212121 | HR-TB | None | SRR3675572 | Other | None | SRR3675571 | HR-TB | None | SRR7496472 | Other | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4816585 | Other | lineage2.2 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4817735 | Other | lineage4.8 | None | ERR4817893 | Other | lineage4.8;La3 | None | SRR3742665 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR1035162 | Other | None | ERR4818021 | Other | La1.8.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4819280 | Sensitive | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4818615 | Other | None | SRR5007188 | Other | lineage4 | None | ERR2514197 | RR-TB | lineage1.1.1.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341456 | Other | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341418 | Other | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR1023509 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341333 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2660539 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6044790 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6044838 | Other | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046225 | HR-TB | None | SRR6045399 | Other | None | SRR6046482 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046397 | Other | None | SRR6046305 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6046492 | Other | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6046540 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR6789626 | Other | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6785527 | Sensitive | lineage2.2.1 | None | ERR502532 | HR-TB | None | ERR11465604 | HR-TB | lineage4.8.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR502889 | Other | None |
|---|
