lineage | Count |
---|---|
70 | |
lineage2.2 | 6 |
lineage2.2.1 | 3 |
lineage4 | 35 |
lineage4.3 | 1 |
lineage4.9 | 5 |
lineage4.5 | 1 |
lineage4.6.2.2 | 4 |
lineage4.8 | 1 |
La1 | 1 |
lineage4.3.4 | 1 |
lineage6.1.3 | 1 |
lineage2.2.1.2 | 2 |
La3 | 1 |
spoligotype | Count |
---|---|
None | 132 |
ID | Drug resistance | Lineage | Country iso2 | SRR14782405 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR3675501 | HR-TB | None | SRR3675488 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675222 | Other | None | ERR181887 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176651 | HR-TB | None | ERR212001 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None | SRR3675456 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212033 | HR-TB | None | ERR212121 | HR-TB | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | ERR4820214 | Sensitive | lineage4.5 | None | ERR4818929 | HR-TB | None | SRR5341387 | Other | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035138 | MDR-TB | None | SRR5341456 | Other | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6045503 | HR-TB | None | SRR6045399 | Other | None | SRR6045526 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046644 | HR-TB | None | SRR6046397 | Other | None | SRR6046299 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6511621 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4816725 | Sensitive | lineage4.8 | gb | ERR323045 | HR-TB | None | SRR8217918 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR3273109 | MDR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4024991 | Other | None | ERR387051 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4769521 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR6359045 | HR-TB | None | ERR6358991 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119669 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786843 | Other | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None |
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