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SRA data
Rv3596c
- c.1780_1782delCTAinsTTG
Drug resistance types
15 Sensitive
1 RR-TB
23 HR-TB
20 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
128 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
43
19
lineage2.2.1
14
lineage2.1;lineage4.9
10
lineage4.1.2.1
9
lineage4.9;lineage6.3
8
lineage4.8
6
lineage4.1.1.3
5
lineage3
5
La3;lineage4.9
5
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
191
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035157
Other
lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR11049020
Other
lineage4.8
None
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR11465024
Other
lineage4.1.1.3
None
ERR11465025
Other
lineage4.1.1.3
None
ERR11465665
Other
lineage4.1.1.3
None
ERR11466146
Other
lineage4.3.4.2.1
None
ERR12015083
Other
La3;lineage4.8
None
ERR12015084
Other
lineage4.8
None
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