Rv3596c - c.1780_1782delCTAinsTTG


Drug resistance types
12 Sensitive 2 RR-TB 77 HR-TB 29 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 121 Other
lineage Counts
lineage Count
lineage4.3.4.2.1 3
lineage2.2 6
lineage5.2 2
lineage4.6.2.2 3
lineage4.7 2
93
lineage2.2.1 22
lineage4.1.2.1 12
lineage4.1.1.3 3
lineage4.3.2.1 1
lineage4.3.4.2 1
lineage4.3.4.1 2
lineage4.9 17
lineage3;La3 1
lineage4.8 9
La1 1
lineage4 10
lineage3 5
lineage2 3
lineage1.2.2.2 1
lineage4.1.3 2
lineage1.1.2 4
lineage4.8;La3 2
lineage4.6.1.1 1
lineage1.1.3.2 1
lineage4.1.1 3
lineage4.3.2 1
lineage4.1 1
lineage4.8;lineage4.1 2
lineage6.1.3 1
lineage6 2
lineage6.3.1 1
La3 1
lineage4.4.1.1 3
lineage4.3.3 4
lineage2.2.1.1 4
lineage3.1 2
lineage1.2.1.2 1
lineage1.1.1 1
lineage2.1 2
lineage4.5 1
lineage4.2;La1.7 1
lineage2.2.1;La3 1
lineage4.9;La3 1
lineage6.3;lineage2.2.1 1
lineage3;lineage2.2.1 1
lineage4.1.1.1 1
lineage4;lineage3;lineage2.2.1 1
lineage4.3 1
lineage4.1.2 1
La1.8.1 1
lineage4.2.2.2 1
lineage4;lineage1.1 1
lineage4.9;lineage3.1.2.1 1
spoligotype Counts
spoligotype Count
None 250
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11466146 Other lineage4.3.4.2.1 None
ERR4831546 HR-TB lineage2.2 None
ERR4872094 MDR-TB lineage5.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR7496523 Other lineage4.7 None
ERR294266 HR-TB None
ERR502532 HR-TB None
ERR502908 HR-TB lineage2.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR6789626 Other None
ERR11465665 Other lineage4.1.1.3 None
SRR6982077 MDR-TB lineage4.3.2.1 None
SRR8217918 HR-TB None
SRR7496509 Other None
SRR7496517 Other None
ERR11465025 Other lineage4.1.1.3 None
ERR11489020 MDR-TB lineage2.2.1 None
ERR11641184 Pre-XDR-TB lineage4.3.4.2 None
SRR7535086 Other None
ERR323043 HR-TB None
ERR11466499 Other lineage4.3.4.1 None
ERR1035157 Other lineage4.9 None
ERR1023302 MDR-TB lineage3;La3 None
ERR11049020 Other lineage4.8 None
ERR11465024 Other lineage4.1.1.3 None
ERR3283010 Other La1 None
ERR12015084 Other lineage4.8 None
ERR12015086 Other lineage4.8 None
ERR3283051 Other lineage4.9 None
ERR3283013 MDR-TB lineage4 None
ERR3283027 HR-TB None
ERR3283036 HR-TB None
ERR4797588 MDR-TB lineage3 None
ERR3804155 Other lineage4.1.2.1 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797201 Other lineage1.2.2.2 None
ERR3445503 HR-TB None
ERR3797069 Other None
ERR3804169 HR-TB lineage4.1.3 None
ERR4800341 Other lineage3 None
ERR4798139 Sensitive lineage1.1.2 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR12015085 Other lineage4.8 None
ERR5336148 Other None
ERR4810741 HR-TB None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR12015083 Other lineage4.8;La3 None
ERR4811022 HR-TB None
ERR702404 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR7821163 Other lineage2.2.1 None
ERR702406 HR-TB None
ERR736839 Other None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR7821123 Other lineage1.1.3.2 None
ERR7910877 MDR-TB lineage4.1.1 None
ERR9117709 HR-TB None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9786076 Sensitive lineage3 None
ERR9117805 Other lineage4.3.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9786440 Other lineage4.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786443 Sensitive lineage4.8 None
ERR9786617 Other lineage4.1.1 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786569 Other lineage4.8 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786604 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786694 Other lineage4.1.2.1 None
ERR9786843 Other None
ERR9787153 Other lineage6.1.3 None
ERR9787165 Other lineage6 None
ERR9787197 Other None
ERR9787139 Other lineage6.3.1 None
SRR1167384 Other lineage4 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
ERR9787336 Other lineage6 None
ERR9896144 Other lineage3 None
ERR990545 Other lineage3 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1169249 Other La3 None
SRR1169194 Other None
SRR1172817 HR-TB None
SRR1169306 Other None
SRR1172234 Other None
SRR1172728 MDR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1173118 Other None
SRR1172857 MDR-TB None
SRR1172951 Other None
SRR1173153 HR-TB None
SRR1173400 Other None
SRR1173166 Other lineage4.9 None
SRR1173363 HR-TB None
SRR1173384 Other lineage4 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173788 Other None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1175074 MDR-TB None
SRR1175049 RR-TB None
SRR1180137 Other lineage2.2.1 None
SRR1180172 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180270 Other lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR1184294 HR-TB None
SRR1181091 Other lineage2.2.1.1 None
SRR1181289 Other lineage2.2.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR1183049 Other lineage2.2 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184381 MDR-TB None
SRR1184372 MDR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR1184380 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1184388 Other None
SRR1196566 HR-TB None
SRR1196546 HR-TB None
SRR1196768 MDR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR12142341 HR-TB None
SRR12006550 Other lineage1.2.1.2 None
SRR19303884 HR-TB None
SRR13837424 Sensitive lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR15014682 MDR-TB lineage4.8 None
SRR15368973 Other None
SRR1710057 Other lineage2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR12416824 HR-TB None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13837766 Sensitive lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR18910194 HR-TB lineage2.2 None
SRR19304036 HR-TB None
SRR21732980 Other lineage4.3.3 None
SRR20969677 HR-TB lineage2 None
SRR25827682 Other None
SRR23961559 Other lineage4.2;La1.7 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR26399973 Other lineage4.9;La3 None
SRR26159043 Other lineage4.9 None
ERR4815604 HR-TB None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
ERR176751 HR-TB None
ERR176778 HR-TB None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR25827605 Pre-XDR-TB lineage4;lineage3;lineage2.2.1 None
ERR176779 HR-TB None
SRR3675232 Other lineage4.1.2.1 None
ERR176793 Other lineage4.1.1 None
ERR161034 Other lineage4.3.4.2.1 None
SRR3416776 Other lineage2.1 None
SRR3675236 HR-TB None
SRR3675465 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675221 HR-TB None
ERR176643 HR-TB None
ERR181824 HR-TB lineage4 None
ERR176568 Other lineage4.3 None
ERR176651 HR-TB None
SRR3675311 Other None
ERR181887 HR-TB None
SRR3675312 HR-TB lineage4 None
ERR2229542 Other lineage4.8 None
ERR4815752 Other lineage4.9 None
ERR212001 HR-TB None
ERR4816999 Other None
ERR2027263 Other lineage4 None
ERR4817037 Other lineage4.9 None
ERR212033 HR-TB None
ERR4817060 RR-TB None
SRR3675572 Other None
ERR212123 Other None
SRR3675574 HR-TB None
ERR212125 HR-TB lineage4 None
ERR4817893 Other lineage4.8;La3 None
SRR3675571 HR-TB None
ERR4816585 Other lineage2.2 None
ERR502912 Other lineage2.2.1 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR4816466 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3742665 HR-TB None
ERR4816656 HR-TB None
ERR4817669 Sensitive lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4818347 Other lineage4.1.2 None
ERR4818021 Other La1.8.1 None
ERR234659 HR-TB None
ERR2513470 Other lineage4.2.2.2 None
ERR4818394 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR4818615 Other None
ERR4818929 HR-TB None
SRR5007188 Other lineage4 None
ERR4819280 Sensitive lineage4 None
ERR4819322 Other lineage4;lineage1.1 None
ERR4819781 Other lineage2.2.1 None
ERR2514390 Sensitive lineage4.9;lineage3.1.2.1 None
ERR2514821 Other lineage2.2.1 None
ERR2514692 Other None
SRR5341302 HR-TB None
SRR6045526 HR-TB None
SRR5341333 HR-TB None
ERR4819932 Other lineage4.7 None
SRR6045577 Sensitive lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6044918 Sensitive lineage4.9 None
SRR6045327 HR-TB None
SRR6046066 HR-TB None
SRR6046225 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046397 Other None
SRR6046521 Other lineage4.4.1.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046540 HR-TB None