lineage | Count |
---|---|
lineage4.1.1.3 | 1 |
lineage4.9 | 21 |
84 | |
lineage4.1.2.1 | 3 |
lineage4 | 11 |
lineage2 | 3 |
lineage1.2.2.2 | 1 |
La1 | 1 |
lineage3 | 1 |
La1.2 | 1 |
lineage4.3.4 | 1 |
lineage4.3.4.2.1 | 3 |
lineage1.1.2 | 3 |
lineage4.6.2.2 | 1 |
lineage4.4.1.1 | 1 |
lineage4.3.3 | 4 |
lineage2.2.1 | 5 |
lineage3.1 | 2 |
lineage1.1.1 | 1 |
lineage2.1 | 2 |
lineage2.2 | 1 |
lineage3;lineage2.2.1 | 1 |
lineage4.9;La3 | 1 |
lineage4.2;La1.7 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.1.1 | 1 |
lineage4.8 | 2 |
lineage4.2.2.2 | 1 |
lineage4.8;La3 | 1 |
lineage4.3.4.1 | 1 |
spoligotype | Count |
---|---|
None | 161 |
ID | Drug resistance | Lineage | Country iso2 | ERR11465024 | Other | lineage4.1.1.3 | None | ERR1035157 | Other | lineage4.9 | None | ERR1063859 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3445503 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4407463 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4811022 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4810741 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4800341 | Other | lineage3 | None | ERR6198317 | Other | La1.2 | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736874 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9786604 | Other | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9787197 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172857 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173166 | Other | lineage4.9 | None | SRR1173153 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173484 | Other | lineage4 | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1175049 | RR-TB | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1184372 | MDR-TB | None | SRR1175090 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR15368973 | Other | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | SRR25827682 | Other | None | SRR18003019 | Other | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19304036 | HR-TB | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR26159043 | Other | lineage4.9 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | ERR181887 | HR-TB | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675234 | Other | None | SRR3675574 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR2229542 | Other | lineage4.8 | None | ERR4816151 | Other | lineage4.8 | None | ERR4817060 | RR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR2027263 | Other | lineage4 | None | ERR4816466 | HR-TB | None | ERR1035138 | MDR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR234659 | HR-TB | None | ERR4818261 | Other | lineage1.1.2 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR5341456 | Other | None | SRR3742665 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR2514821 | Other | lineage2.2.1 | None | ERR2514692 | Other | None | ERR4819839 | Sensitive | lineage1.1.2 | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | ERR2693231 | Other | None | ERR2693230 | Other | None | SRR6045503 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046397 | Other | None | SRR6046644 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6789626 | Other | None | ERR323043 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | ERR11466499 | Other | lineage4.3.4.1 | None | ERR323045 | HR-TB | None |
---|