SRR6045450
|
Other
|
lineage4.9
|
None
|
ERR2515228
|
Other
|
lineage2.2.1
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR2693238
|
HR-TB
|
lineage4.9
|
None
|
ERR2446563
|
Other
|
lineage2.2.1
|
nl
|
ERR4821053
|
Other
|
lineage3
|
None
|
ERR2693239
|
HR-TB
|
|
None
|
SRR6045526
|
HR-TB
|
|
None
|
ERR4821143
|
RR-TB
|
lineage4.9
|
None
|
ERR2652925
|
HR-TB
|
lineage4.9
|
None
|
SRR6045519
|
HR-TB
|
|
None
|
ERR278594
|
HR-TB
|
|
None
|
ERR2660539
|
Other
|
lineage4.9
|
None
|
ERR2446118
|
Other
|
lineage4.1.2.1
|
nl
|
ERR4821276
|
Other
|
lineage3
|
None
|
SRR6044876
|
Sensitive
|
lineage4
|
None
|
ERR2693227
|
Other
|
lineage4.9
|
None
|
SRR6045555
|
HR-TB
|
|
None
|
SRR6044855
|
Other
|
lineage4.9
|
None
|
ERR2446144
|
Other
|
lineage3
|
nl
|
SRR6045664
|
Other
|
lineage4.2.1
|
None
|
SRR6046133
|
HR-TB
|
|
None
|
SRR6044790
|
HR-TB
|
|
None
|
SRR6044838
|
Other
|
lineage4.9
|
None
|
SRR6045909
|
Other
|
lineage4.8
|
None
|
SRR6044875
|
HR-TB
|
lineage4.9
|
None
|
SRR6045053
|
Other
|
|
None
|
SRR6044952
|
RR-TB
|
lineage4.9
|
None
|
SRR6045952
|
HR-TB
|
|
None
|
SRR6045002
|
MDR-TB
|
lineage4.9
|
None
|
SRR6045217
|
Other
|
lineage4
|
None
|
SRR6046210
|
Other
|
lineage4
|
None
|
SRR6046046
|
Other
|
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
SRR6046066
|
HR-TB
|
|
None
|
SRR6045327
|
HR-TB
|
|
None
|
SRR6046305
|
Other
|
lineage4.9
|
None
|
SRR6046253
|
HR-TB
|
lineage4.9
|
None
|
SRR6045399
|
Other
|
|
None
|
SRR6046225
|
HR-TB
|
|
None
|
SRR6046259
|
Sensitive
|
lineage4.9
|
None
|
SRR6325444
|
HR-TB
|
|
None
|
SRR6046397
|
Other
|
|
None
|
SRR6046362
|
HR-TB
|
|
None
|
SRR6046385
|
Other
|
lineage4.9
|
None
|
SRR6046382
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2851356
|
Sensitive
|
lineage4.9
|
None
|
SRR6046460
|
HR-TB
|
|
None
|
ERR2517528
|
Other
|
lineage3
|
nl
|
ERR4830353
|
Other
|
|
None
|
SRR6046540
|
HR-TB
|
|
None
|
SRR6046492
|
Other
|
|
None
|
SRR6046514
|
HR-TB
|
|
None
|
SRR6046521
|
Other
|
lineage4.4.1.1
|
None
|
SRR6325448
|
HR-TB
|
|
None
|
SRR6046594
|
HR-TB
|
lineage4
|
None
|
ERR3077978
|
Other
|
lineage1.1
|
None
|
SRR6046611
|
HR-TB
|
lineage4.9
|
None
|
SRR6079962
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR6397654
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR6325442
|
HR-TB
|
|
None
|
SRR6046644
|
HR-TB
|
|
None
|
SRR6325447
|
HR-TB
|
|
None
|
SRR6046878
|
HR-TB
|
lineage4
|
None
|
SRR6458421
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR323037
|
HR-TB
|
lineage4
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR323034
|
HR-TB
|
lineage3.1
|
None
|
ERR502473
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR485006
|
HR-TB
|
lineage4.9
|
None
|
ERR4831117
|
HR-TB
|
|
None
|
ERR502474
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
ERR502481
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR502479
|
RR-TB
|
lineage4.9
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR6785262
|
Sensitive
|
lineage4.2.1
|
None
|
ERR4831638
|
Sensitive
|
|
None
|
ERR294248
|
HR-TB
|
|
None
|
SRR6785527
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6785413
|
Other
|
lineage2.2.1
|
None
|
SRR6789628
|
HR-TB
|
lineage4.9
|
None
|
SRR6789626
|
Other
|
|
None
|
SRR6982365
|
Other
|
lineage2.2.1
|
None
|
ERR294266
|
HR-TB
|
|
None
|
SRR7585435
|
Other
|
lineage4.9
|
None
|
ERR323036
|
HR-TB
|
|
None
|
ERR502532
|
HR-TB
|
|
None
|
ERR502943
|
HR-TB
|
|
None
|
ERR5311081
|
HR-TB
|
|
None
|
ERR5311090
|
HR-TB
|
|
None
|
SRR7535086
|
Other
|
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
ERR5311099
|
HR-TB
|
|
None
|
ERR5311077
|
RR-TB
|
La1.8.1
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
ERR323038
|
HR-TB
|
|
None
|
SRR8217918
|
HR-TB
|
|
None
|
SRR7496509
|
Other
|
|
None
|
SRR7496517
|
Other
|
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR7645928
|
RR-TB
|
lineage4.7
|
None
|
SRR9971080
|
RR-TB
|
lineage2.2.1
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
SRR9971122
|
MDR-TB
|
lineage4.8
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR323043
|
HR-TB
|
|
None
|
ERR323041
|
HR-TB
|
|
None
|
ERR323055
|
HR-TB
|
|
None
|
ERR323054
|
HR-TB
|
lineage3.1
|
None
|
ERR323063
|
HR-TB
|
|
None
|
ERR323108
|
HR-TB
|
lineage4
|
None
|
ERR11466499
|
Other
|
lineage4.3.4.1
|
None
|
DRR184982
|
RR-TB
|
lineage2.2.1
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
ERR11465025
|
Other
|
lineage4.1.1.3
|
None
|
ERR1023295
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR1023525
|
HR-TB
|
lineage4
|
None
|
ERR1063857
|
HR-TB
|
|
None
|
ERR067699
|
HR-TB
|
lineage4
|
None
|
ERR1023502
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
ERR1063839
|
HR-TB
|
lineage2.2
|
None
|
ERR108125
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR108471
|
HR-TB
|
lineage4
|
None
|
ERR1199132
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR133825
|
Sensitive
|
lineage4
|
None
|
ERR11465714
|
Other
|
lineage4.4.1.1;lineage1.2.2.1
|
None
|
ERR12015084
|
Other
|
lineage4.8
|
None
|
ERR400336
|
Sensitive
|
lineage4
|
None
|
ERR3283013
|
MDR-TB
|
lineage4
|
None
|
ERR3283017
|
HR-TB
|
|
None
|
ERR3283014
|
HR-TB
|
|
None
|
ERR3283021
|
HR-TB
|
|
None
|
ERR3283025
|
HR-TB
|
|
None
|
ERR3283028
|
Other
|
|
None
|
ERR3283031
|
HR-TB
|
|
None
|
ERR3283036
|
HR-TB
|
|
None
|
ERR3283046
|
MDR-TB
|
lineage4.9
|
None
|
ERR3283048
|
HR-TB
|
lineage4.9
|
None
|
ERR3283051
|
Other
|
lineage4.9
|
None
|
ERR3283057
|
HR-TB
|
lineage4
|
None
|
ERR3324368
|
RR-TB
|
lineage6.2.3;lineage1.1.2
|
None
|
ERR3445501
|
HR-TB
|
|
None
|
ERR3445502
|
HR-TB
|
lineage4
|
None
|
ERR3468488
|
RR-TB
|
La1.8.1
|
None
|
ERR3468544
|
HR-TB
|
|
None
|
ERR3797016
|
HR-TB
|
|
None
|
ERR3797015
|
HR-TB
|
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR3797043
|
HR-TB
|
|
None
|
ERR3797036
|
HR-TB
|
|
None
|
ERR3797047
|
HR-TB
|
lineage4
|
None
|
ERR3797065
|
MDR-TB
|
lineage4
|
None
|
ERR3797069
|
Other
|
|
None
|
ERR3797080
|
HR-TB
|
lineage4.9
|
None
|
ERR3797079
|
Sensitive
|
lineage4
|
None
|
ERR3797064
|
Sensitive
|
|
None
|
ERR3797081
|
Sensitive
|
lineage4
|
None
|
ERR3797083
|
HR-TB
|
|
None
|
ERR3797086
|
Other
|
lineage4.9
|
None
|
ERR3797087
|
Sensitive
|
lineage4
|
None
|
ERR3283010
|
Other
|
La1
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
ERR3283027
|
HR-TB
|
|
None
|
ERR3283040
|
HR-TB
|
|
None
|
ERR3283043
|
Other
|
lineage4.9
|
None
|
ERR3283047
|
HR-TB
|
|
None
|
ERR3283058
|
Other
|
lineage4.9
|
None
|
ERR3283055
|
HR-TB
|
|
None
|
ERR3439265
|
Other
|
lineage4.9
|
None
|
ERR3797046
|
HR-TB
|
|
None
|
ERR3797048
|
HR-TB
|
|
None
|
ERR3797058
|
Other
|
lineage4.9
|
None
|
ERR3797060
|
Other
|
La1.8.1
|
None
|
ERR3797063
|
HR-TB
|
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR387051
|
HR-TB
|
|
None
|
ERR400345
|
Other
|
lineage4
|
None
|
ERR4407452
|
Sensitive
|
lineage3
|
None
|
ERR4187652
|
Other
|
lineage4.9
|
None
|
ERR4188350
|
HR-TB
|
|
None
|
ERR4769530
|
RR-TB
|
lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR4769442
|
HR-TB
|
lineage4
|
None
|
ERR4769452
|
HR-TB
|
|
None
|
ERR4769450
|
HR-TB
|
|
None
|
ERR4769493
|
Pre-XDR-TB
|
lineage4.9;La1.3
|
None
|
ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
ERR4769521
|
HR-TB
|
|
None
|
ERR4769553
|
RR-TB
|
lineage4.9
|
None
|
ERR4769554
|
RR-TB
|
lineage4.9
|
None
|
ERR4796351
|
MDR-TB
|
lineage4.9
|
None
|
ERR4796577
|
MDR-TB
|
|
None
|
ERR4797037
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2
|
None
|
ERR4811022
|
HR-TB
|
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4799025
|
Pre-XDR-TB
|
|
None
|
ERR4799171
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4809333
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4810624
|
HR-TB
|
lineage2.2
|
None
|
ERR4810741
|
HR-TB
|
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
ERR4799989
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR4800102
|
Sensitive
|
lineage3.1.2.1
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR12015083
|
Other
|
lineage4.8;La3
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
ERR5908228
|
Other
|
lineage4.3.3
|
None
|
ERR6198317
|
Other
|
La1.2
|
None
|
ERR4811105
|
HR-TB
|
|
None
|
ERR4811142
|
MDR-TB
|
|
None
|
ERR5336148
|
Other
|
|
None
|
ERR5917710
|
Other
|
lineage4.1.2.1
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
ERR6358837
|
HR-TB
|
|
None
|
ERR6358951
|
HR-TB
|
lineage4
|
None
|
ERR6358991
|
HR-TB
|
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR6866241
|
Other
|
lineage4.3.2
|
None
|
ERR6866547
|
Sensitive
|
lineage4
|
None
|
ERR6866807
|
HR-TB
|
lineage4
|
None
|
ERR702404
|
HR-TB
|
|
None
|
ERR702406
|
HR-TB
|
|
None
|
ERR736831
|
HR-TB
|
lineage4.9
|
None
|
ERR736874
|
HR-TB
|
|
None
|
ERR736837
|
Other
|
lineage4.9
|
None
|
ERR736835
|
HR-TB
|
|
None
|
ERR736839
|
Other
|
|
None
|
ERR736867
|
HR-TB
|
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR760733
|
MDR-TB
|
lineage4.1.2.1.1
|
None
|
ERR772255
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR8976043
|
HR-TB
|
|
None
|
SRR21732954
|
Sensitive
|
lineage4.9
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR6359045
|
HR-TB
|
|
None
|
SRR21733183
|
RR-TB
|
lineage1.1.2
|
None
|
ERR9117721
|
HR-TB
|
lineage1.1.2
|
None
|
ERR9117709
|
HR-TB
|
|
None
|
ERR9117805
|
Other
|
lineage4.3.2
|
None
|
ERR9119096
|
Other
|
lineage4.3.3
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR9119669
|
HR-TB
|
|
None
|
ERR9786986
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR9786384
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786604
|
Other
|
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786164
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR9786440
|
Other
|
lineage4.1
|
None
|
ERR9786515
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786525
|
Other
|
lineage4.8;lineage4.1
|
None
|
ERR9786526
|
Other
|
lineage4.8;lineage4.1
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
ERR9786617
|
Other
|
lineage4.1.1
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
ERR9786671
|
Other
|
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786843
|
Other
|
|
None
|
ERR9787153
|
Other
|
lineage6.1.3
|
None
|
ERR9787165
|
Other
|
lineage6
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR9787197
|
Other
|
|
None
|
ERR987707
|
MDR-TB
|
lineage4.7
|
None
|
ERR987765
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR11349147
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR1049675
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1049677
|
MDR-TB
|
lineage4.8;lineage4.3.3
|
None
|
SRR1062919
|
HR-TB
|
lineage2.2.1
|
None
|
ERR9992879
|
XDR-TB
|
lineage4.3.3
|
None
|
SRR069978
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR069981
|
HR-TB
|
lineage2.2.2
|
None
|
SRR069989
|
HR-TB
|
lineage2
|
None
|
SRR1049674
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1049676
|
MDR-TB
|
lineage4.8;lineage4.3.3
|
None
|
SRR1062920
|
MDR-TB
|
lineage4.8;lineage4.3.3
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1140574
|
MDR-TB
|
lineage4.8;lineage4.3.3
|
None
|
SRR1140724
|
HR-TB
|
lineage2.2.1
|
None
|
SRR11462861
|
Other
|
La1.8.1
|
None
|
SRR1162740
|
Other
|
lineage4.1.2.1
|
None
|
SRR1163221
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR1162864
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR1165584
|
Other
|
lineage4.1.2.1
|
None
|
SRR1165423
|
Other
|
lineage4.1.2.1
|
None
|
SRR1165506
|
Other
|
lineage4.1.2.1
|
None
|
SRR1166821
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR1167055
|
Other
|
lineage4.1.2.1
|
None
|
SRR1173453
|
Other
|
lineage4.4.1.1
|
None
|
SRR1169194
|
Other
|
|
None
|
SRR1172234
|
Other
|
|
None
|
SRR1172717
|
Other
|
lineage4.9
|
None
|
SRR1172728
|
MDR-TB
|
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
SRR1172817
|
HR-TB
|
|
None
|
SRR1172844
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1172857
|
MDR-TB
|
|
None
|
SRR1172951
|
Other
|
|
None
|
SRR1173118
|
Other
|
|
None
|
SRR1173153
|
HR-TB
|
|
None
|
SRR1173166
|
Other
|
lineage4.9
|
None
|
SRR1173170
|
Other
|
lineage4.9
|
None
|
SRR1173185
|
HR-TB
|
lineage4.9
|
None
|
SRR1173218
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1173330
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR1173363
|
HR-TB
|
|
None
|
SRR1173385
|
Sensitive
|
lineage4.9
|
None
|
SRR1173384
|
Other
|
lineage4
|
None
|
SRR1173400
|
Other
|
|
None
|
SRR1173562
|
HR-TB
|
lineage4
|
None
|
SRR1173484
|
Other
|
lineage4
|
None
|
SRR1173633
|
HR-TB
|
lineage4.9
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
SRR1173687
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1173629
|
Other
|
|
None
|
SRR1175074
|
MDR-TB
|
|
None
|
SRR1173788
|
Other
|
|
None
|
SRR1175049
|
RR-TB
|
|
None
|
SRR1173778
|
Other
|
|
None
|
SRR1175090
|
Other
|
lineage4.9
|
None
|
SRR1175473
|
Other
|
lineage4.9
|
None
|
SRR1175474
|
HR-TB
|
lineage4.9
|
None
|
SRR1175472
|
MDR-TB
|
lineage4
|
None
|
SRR1175491
|
MDR-TB
|
lineage4
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
SRR1175513
|
Other
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
SRR1180148
|
Sensitive
|
lineage4.9
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
SRR1180172
|
Other
|
lineage2.2.1
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9;lineage2.2
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
SRR1181020
|
Other
|
lineage2.2.1
|
None
|
SRR1181091
|
Other
|
lineage2.2.1.1
|
None
|
SRR1181214
|
Other
|
lineage4.9
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
SRR1181289
|
Other
|
lineage2.2.1
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
SRR1181368
|
Other
|
lineage4.9
|
None
|
SRR1181390
|
Sensitive
|
lineage2
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR1183049
|
Other
|
lineage2.2
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
SRR1184294
|
HR-TB
|
|
None
|
SRR1183106
|
Other
|
lineage2.2.1.1
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1184308
|
Sensitive
|
lineage4.9
|
None
|
SRR1184312
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1184329
|
MDR-TB
|
lineage4.9
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR1184380
|
HR-TB
|
|
None
|
SRR1196474
|
HR-TB
|
lineage3.1
|
None
|
SRR1184388
|
Other
|
|
None
|
SRR1196478
|
MDR-TB
|
lineage4.9
|
None
|
SRR1196494
|
MDR-TB
|
|
None
|
SRR1196545
|
HR-TB
|
lineage4.9
|
None
|
SRR1196566
|
HR-TB
|
|
None
|
SRR1196546
|
HR-TB
|
|
None
|
SRR1196571
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1196677
|
HR-TB
|
lineage2
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
SRR12634609
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR12142341
|
HR-TB
|
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
|
None
|
SRR13423544
|
Other
|
lineage4.5
|
None
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR13423649
|
Sensitive
|
lineage2.2.1
|
None
|
SRR13837642
|
RR-TB
|
lineage4.9
|
None
|
SRR13837544
|
Sensitive
|
lineage4.9
|
None
|
SRR13837796
|
Sensitive
|
lineage4.9
|
None
|
SRR13861168
|
RR-TB
|
lineage4.9
|
None
|
SRR13861288
|
Other
|
lineage4.9
|
None
|
SRR13861324
|
Other
|
lineage4.9
|
None
|
SRR13861305
|
Other
|
lineage4.9
|
None
|
SRR13861399
|
Other
|
lineage4.9
|
None
|
SRR13861322
|
Other
|
lineage4.9
|
None
|
SRR13861386
|
HR-TB
|
lineage4.9
|
None
|
SRR13861381
|
MDR-TB
|
lineage4.9
|
None
|
SRR14782405
|
HR-TB
|
|
None
|
SRR13861447
|
RR-TB
|
lineage4.9
|
None
|
SRR13861500
|
RR-TB
|
lineage4.9
|
None
|
SRR13861566
|
Other
|
lineage4.9
|
None
|
SRR14066533
|
Sensitive
|
lineage1.1.1
|
None
|
SRR14334194
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1510066
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR16156188
|
HR-TB
|
lineage4.9
|
None
|
SRR15368973
|
Other
|
|
None
|
SRR16156697
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16156804
|
RR-TB
|
lineage4.9
|
None
|
SRR16156832
|
RR-TB
|
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
SRR1640750
|
HR-TB
|
|
None
|
SRR16627752
|
RR-TB
|
lineage4.4
|
None
|
SRR1791696
|
Other
|
La1.8.1
|
None
|
SRR17658565
|
Other
|
lineage3
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
SRR18213713
|
HR-TB
|
lineage4.5
|
None
|
SRR18549032
|
HR-TB
|
lineage7;lineage2.2.1.2
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
SRR2010299
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR19304036
|
HR-TB
|
|
None
|
SRR19303884
|
HR-TB
|
|
None
|
SRR20969542
|
Other
|
lineage4.4.2
|
None
|
SRR20969677
|
HR-TB
|
lineage2
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
SRR22175249
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5709967
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827682
|
Other
|
|
None
|
SRR25827687
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR11081257
|
Other
|
lineage4.8
|
None
|
SRR26937071
|
MDR-TB
|
lineage2.2.1;La3
|
None
|
ERR11081258
|
Other
|
lineage4.8
|
None
|
SRR8692887
|
Other
|
|
None
|
SRR21732980
|
Other
|
lineage4.3.3
|
None
|
SRR26159063
|
Sensitive
|
lineage4.9
|
None
|
SRR26937107
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26399973
|
Other
|
lineage4.9;La3
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
SRR23961559
|
Other
|
lineage4.2;La1.7
|
None
|
SRR23961558
|
Other
|
lineage6.3;lineage4.9;lineage2.1
|
None
|
ERR4815604
|
HR-TB
|
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR28119811
|
Other
|
lineage6.3;lineage2.2.1
|
None
|
SRR25827497
|
Pre-XDR-TB
|
lineage3;lineage2.2.1
|
None
|
SRR25827605
|
Pre-XDR-TB
|
lineage4;lineage3;lineage2.2.1
|
None
|
SRR3675464
|
HR-TB
|
lineage4.1
|
None
|
SRR3675472
|
Sensitive
|
lineage4.9
|
None
|
SRR3675465
|
HR-TB
|
|
None
|
ERR176793
|
Other
|
lineage4.1.1
|
None
|
SRR6325445
|
HR-TB
|
|
None
|
SRR3601585
|
Pre-XDR-TB
|
lineage2.2
|
None
|
ERR1035239
|
HR-TB
|
|
None
|
SRR3675482
|
HR-TB
|
|
None
|
ERR4814352
|
HR-TB
|
lineage2.2.1
|
None
|
ERR161033
|
HR-TB
|
|
None
|
SRR3675488
|
HR-TB
|
|
None
|
ERR161034
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR161039
|
Sensitive
|
lineage4.3.4
|
None
|
SRR3675486
|
HR-TB
|
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
ERR4814536
|
MDR-TB
|
lineage3;lineage2.1
|
None
|
SRR3619841
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3619764
|
Pre-XDR-TB
|
lineage2.2
|
None
|
ERR181744
|
HR-TB
|
|
None
|
SRR3618864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4814639
|
HR-TB
|
lineage4
|
None
|
SRR3675501
|
HR-TB
|
|
None
|
SRR3675221
|
HR-TB
|
|
None
|
ERR4814683
|
Sensitive
|
lineage4.1.3;lineage4.1.2.1;lineage1.1.2
|
None
|
SRR3675222
|
Other
|
|
None
|
ERR4817060
|
RR-TB
|
|
None
|
ERR176580
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR3675284
|
HR-TB
|
lineage4.9
|
None
|
ERR4815550
|
Other
|
lineage4
|
None
|
SRR3675383
|
HR-TB
|
|
None
|
SRR3675387
|
Sensitive
|
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR3675456
|
HR-TB
|
|
None
|
ERR4815079
|
RR-TB
|
lineage3
|
None
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
SRR3675545
|
HR-TB
|
|
None
|
ERR4817037
|
Other
|
lineage4.9
|
None
|
ERR212034
|
HR-TB
|
|
None
|
SRR3675236
|
HR-TB
|
|
None
|
ERR1750907
|
RR-TB
|
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675270
|
HR-TB
|
|
None
|
SRR3675280
|
HR-TB
|
lineage4.9
|
None
|
SRR3675311
|
Other
|
|
None
|
SRR3675312
|
HR-TB
|
lineage4
|
None
|
ERR4815556
|
RR-TB
|
lineage3
|
None
|
SRR3675542
|
Other
|
lineage4.9
|
None
|
ERR4816999
|
Other
|
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
ERR4816151
|
Other
|
lineage4.8
|
None
|
ERR212001
|
HR-TB
|
|
None
|
SRR5341422
|
HR-TB
|
lineage2.1
|
None
|
SRR3675555
|
HR-TB
|
|
None
|
ERR4816466
|
HR-TB
|
|
None
|
ERR212123
|
Other
|
|
None
|
ERR4817069
|
RR-TB
|
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR3675577
|
Sensitive
|
lineage4.9
|
None
|
SRR3675574
|
HR-TB
|
|
None
|
ERR212121
|
HR-TB
|
|
None
|
SRR3675558
|
HR-TB
|
|
None
|
SRR3675571
|
HR-TB
|
|
None
|
ERR4816548
|
MDR-TB
|
lineage4.5
|
None
|
ERR2229198
|
MDR-TB
|
lineage4.8
|
None
|
ERR4816550
|
Sensitive
|
lineage4.9
|
None
|
ERR4816551
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR3742665
|
HR-TB
|
|
None
|
ERR4816585
|
Other
|
lineage2.2
|
None
|
ERR4817204
|
RR-TB
|
lineage4.9
|
None
|
ERR4816656
|
HR-TB
|
|
None
|
ERR502912
|
Other
|
lineage2.2.1
|
None
|
ERR3275215
|
Other
|
lineage4.1.2.1
|
nl
|
ERR4816762
|
Other
|
lineage4;lineage2
|
None
|
SRR7898221
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4815815
|
Sensitive
|
lineage4
|
None
|
ERR4817735
|
Other
|
lineage4.8
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
ERR4817692
|
HR-TB
|
lineage4;lineage1.1.2
|
None
|
ERR234659
|
HR-TB
|
|
None
|
ERR4817893
|
Other
|
lineage4.8;La3
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
SRR7496472
|
Other
|
|
None
|
ERR4818021
|
Other
|
La1.8.1
|
None
|
ERR3275196
|
Other
|
lineage2.2.1
|
nl
|
ERR3275941
|
RR-TB
|
lineage4.3
|
nl
|
ERR2229143
|
Other
|
lineage4.1.1
|
None
|
ERR4818607
|
Sensitive
|
lineage4.9
|
None
|
ERR4818347
|
Other
|
lineage4.1.2
|
None
|
ERR2513470
|
Other
|
lineage4.2.2.2
|
None
|
ERR4818929
|
HR-TB
|
|
None
|
ERR3275220
|
Other
|
lineage3
|
nl
|
ERR2509673
|
Other
|
lineage2.2.1
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR4818615
|
Other
|
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
ERR4819280
|
Sensitive
|
lineage4
|
None
|
SRR5007188
|
Other
|
lineage4
|
None
|
ERR4818646
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR5341373
|
HR-TB
|
lineage4
|
None
|
SRR5341400
|
HR-TB
|
lineage4
|
None
|
ERR4819322
|
Other
|
lineage4;lineage1.1
|
None
|
ERR4820335
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819383
|
RR-TB
|
lineage4.9
|
None
|
ERR2514327
|
HR-TB
|
lineage4.8
|
None
|
ERR4819462
|
Other
|
lineage4
|
None
|
SRR5341432
|
HR-TB
|
lineage4
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
ERR2514390
|
Sensitive
|
lineage4.9;lineage3.1.2.1
|
None
|
ERR1035138
|
MDR-TB
|
|
None
|
SAMN02414850
|
Other
|
lineage4.1.2.1
|
None
|
ERR2514552
|
Sensitive
|
lineage3
|
None
|
ERR4819759
|
Sensitive
|
lineage4.9
|
None
|
SRR5341293
|
HR-TB
|
lineage4
|
None
|
ERR2514692
|
Other
|
|
None
|
ERR4819910
|
Other
|
lineage4.9
|
None
|
ERR4819863
|
RR-TB
|
lineage4.9
|
None
|
ERR2514771
|
RR-TB
|
lineage4.8.2
|
None
|
SRR5341302
|
HR-TB
|
|
None
|
ERR2514821
|
Other
|
lineage2.2.1
|
None
|
SRR5341313
|
HR-TB
|
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
ERR2515026
|
Sensitive
|
lineage4.3.2
|
None
|
SRR5341315
|
Sensitive
|
|
None
|
SRR5341332
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR5341333
|
HR-TB
|
|
None
|
SRR5341330
|
HR-TB
|
|
None
|