Rv0668 - c.207C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
51 Sensitive
5 RR-TB
14 HR-TB
11 MDR-TB
0 Pre-XDR-TB
3 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 56 |
| La3;lineage4.9 | 5 |
| lineage2.2.1 | 7 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.1.1.3 | 4 |
| lineage2.2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| La1.8.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage5.2 | 2 |
| lineage2.2.2 | 1 |
| La1;lineage4.9 | 2 |
| lineage4 | 2 |
| lineage4.1.1.1 | 1 |
| 3 | |
| M.canetti;lineage2.2 | 2 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage4.6.5 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.8 | 3 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| lineage3 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 121 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180312 | Sensitive | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR550637 | MDR-TB | lineage4.1.1.3 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR212001 | HR-TB | None | ERR212033 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR13285068 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR10809074 | Sensitive | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR9786526 | Other | lineage4.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR12420587 | MDR-TB | lineage2.2.1 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR176751 | Other | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR9786843 | Other | None | ERR2514692 | Other | None | ERR2514821 | Sensitive | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181214 | Other | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR12015084 | Other | lineage4.8 | None | ERR2199988 | MDR-TB | lineage4.1.1.3 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR6044780 | Sensitive | lineage4.9 | None | ERR12015086 | RR-TB | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR1169249 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR12015085 | Other | lineage4.8 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR9786525 | Other | lineage4 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR990545 | Other | lineage3 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None |
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