Rv3245c - c.-688_-686delTTGinsCTA


Drug resistance types
4 Sensitive 1 RR-TB 12 HR-TB 11 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 96 Other
lineage Counts
lineage Count
La3;lineage2 1
lineage2.1;lineage4.9;lineage6.3 5
lineage4.9 28
lineage1.1.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 2
17
lineage3.1.1 1
lineage2.2.2;lineage4 1
lineage2.1;lineage4.9 10
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.2.1 8
lineage4.9;lineage6.3 8
lineage4.8 3
lineage2.1;lineage6.3 1
La3;lineage2.2.1 1
lineage3.1 1
lineage4.6.2.2 1
lineage4.1.2.1 5
La3;lineage4.9 3
lineage4.1.1.1 1
lineage4.6.1.1 1
lineage1.1.3.2 1
lineage3 2
lineage4 2
lineage4.1.3 1
lineage1.2.2.2 1
lineage2.1 2
lineage4.4.1.1 2
lineage1.1.1 1
La1.2.BCG;La1.8.1 1
lineage4.3.3 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage5.2 2
La3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.6.3;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 125
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR20969677 HR-TB La3;lineage2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675214 Other lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4815604 Other None
SRR6789626 Other None
ERR4816999 Other None
SRR28119753 Other lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR11049020 Other lineage4.8 None
SRR28119777 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR176751 Other lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR28119752 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR1184294 Other lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR212033 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
SRR1167384 Other La3;lineage4.9 None
SRR1173363 Other None
SRR3675572 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675457 Other lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR29096541 Other lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR7821126 Sensitive lineage1.1.3.2 None
ERR4817896 HR-TB lineage2.2.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1169249 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR9786515 Other lineage4.1.2.1 None
SRR29051093 Other lineage4.9 None
SRR3675236 Other None
ERR3283044 Other lineage4 None
SRR7535086 Other None
ERR3804169 HR-TB lineage4.1.3 None
ERR4797201 Other lineage1.2.2.2 None
ERR176643 Other La3;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR9117709 Other None
SRR3675549 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR11068570 Other lineage4 None
ERR3804155 Other lineage4.1.2.1 None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
ERR12268496 Sensitive lineage4.4.1.1 None
ERR2514821 Sensitive lineage2.2.1 None
SRR1184372 MDR-TB None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR21690362 Other lineage1.1.1 None
ERR4818615 Sensitive None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR1172951 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR11252736 Other lineage4.9 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR29772570 Other lineage4.9 None
SRR1175074 Other None
ERR4817735 Other lineage4.8 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1196494 MDR-TB None
ERR4816585 Other lineage2.2 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR1035157 Other lineage4.9 None
ERR11081257 Other lineage4.8 None
SRR3675248 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4800341 Other lineage3 None
ERR4816466 HR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
SRR12416840 MDR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR29097037 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR502908 HR-TB lineage2.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR4819781 Other lineage2.2.1 None
SRR1196566 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None