Rv3245c - c.-688_-686delTTGinsCTA
Drug resistance types
4 Sensitive
1 RR-TB
12 HR-TB
11 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
96 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4.9 | 28 |
| lineage1.1.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| 17 | |
| lineage3.1.1 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage2.1;lineage4.9 | 10 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1 | 8 |
| lineage4.9;lineage6.3 | 8 |
| lineage4.8 | 3 |
| lineage2.1;lineage6.3 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage3.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2.1 | 5 |
| La3;lineage4.9 | 3 |
| lineage4.1.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage3 | 2 |
| lineage4 | 2 |
| lineage4.1.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.1 | 2 |
| lineage4.4.1.1 | 2 |
| lineage1.1.1 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.3.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage5.2 | 2 |
| La3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 125 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20969677 | HR-TB | La3;lineage2 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675214 | Other | lineage4.9 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR4815604 | Other | None | SRR6789626 | Other | None | ERR4816999 | Other | None | SRR28119753 | Other | lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR11049020 | Other | lineage4.8 | None | SRR28119777 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR1173400 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR7496509 | Other | None | ERR176751 | Other | lineage4.9 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | SRR28119752 | Other | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR1184294 | Other | lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR1173363 | Other | None | SRR3675572 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR29096541 | Other | lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1169249 | Other | lineage4.9 | None | SRR29051077 | Other | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR9786515 | Other | lineage4.1.2.1 | None | SRR29051093 | Other | lineage4.9 | None | SRR3675236 | Other | None | ERR3283044 | Other | lineage4 | None | SRR7535086 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR9117709 | Other | None | SRR3675549 | Other | lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR11068570 | Other | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR234659 | Other | None | ERR4814352 | Other | lineage2.2.1 | None | ERR12268496 | Sensitive | lineage4.4.1.1 | None | ERR2514821 | Sensitive | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR21690362 | Other | lineage1.1.1 | None | ERR4818615 | Sensitive | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | SRR18213713 | HR-TB | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR29772570 | Other | lineage4.9 | None | SRR1175074 | Other | None | ERR4817735 | Other | lineage4.8 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196494 | MDR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR1035157 | Other | lineage4.9 | None | ERR11081257 | Other | lineage4.8 | None | SRR3675248 | Other | lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4800341 | Other | lineage3 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR1172817 | Other | La3 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR1196566 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None |
|---|
