SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR23961549
|
Other
|
La1.2
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6046485
|
Other
|
lineage4.9
|
None
|
ERR736831
|
Other
|
lineage4.9
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
ERR11252558
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR11067251
|
Sensitive
|
lineage1.1.2
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
ERR11043481
|
Sensitive
|
lineage1.1.2
|
None
|
SRR28170846
|
Other
|
lineage1.1.2
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
ERR2514821
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR1167384
|
Other
|
La3;lineage4.9
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR1172242
|
Sensitive
|
lineage1.1.2
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
SRR28045990
|
Sensitive
|
lineage1.1.2
|
None
|
SRR11348159
|
Sensitive
|
lineage1.1.2
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
SRR6785267
|
Other
|
lineage2.2.1
|
None
|
ERR4817893
|
Other
|
La3;lineage4.8
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR403351
|
Other
|
lineage1.1.2
|
None
|
SRR1180279
|
Sensitive
|
lineage1.1.2
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR550636
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR5341313
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR3085514
|
HR-TB
|
lineage1.1.2
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
SAMN02599167
|
Sensitive
|
lineage1.1.2
|
in
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
SRR6046577
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
SRR2467268
|
HR-TB
|
lineage1.1.2
|
None
|
SRR6785262
|
Sensitive
|
lineage4.2.1
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4815604
|
Other
|
|
None
|
ERR4816442
|
HR-TB
|
lineage1.1.2
|
gb
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
SRR29051077
|
Other
|
lineage4.9
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
ERR4818252
|
Sensitive
|
lineage4.1.1.2
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR11050033
|
Sensitive
|
lineage1.1.2
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
ERR11050719
|
Sensitive
|
lineage1.1.2
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
ERR13290190
|
Other
|
lineage1.1.2
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR502912
|
Other
|
lineage2.2.1
|
None
|
SRR28045643
|
Sensitive
|
lineage1.1.2
|
None
|
ERR278520
|
HR-TB
|
lineage1.1.2
|
None
|
ERR349296
|
Sensitive
|
lineage4.9
|
None
|
SAMN02598957
|
Sensitive
|
lineage1.1.2
|
in
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
SRR6045233
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
ERR4817060
|
Other
|
|
None
|
ERR234659
|
Other
|
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
ERR369159
|
Sensitive
|
lineage4.9
|
None
|
ERR405209
|
Sensitive
|
La1.7;lineage4.9
|
None
|
SRR29772465
|
Pre-XDR-TB
|
lineage1.1.2
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
SRR18213791
|
HR-TB
|
lineage1.1.2
|
None
|
ERR11465714
|
Other
|
lineage1.2.2.1;lineage4.4.1.1
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR22424841
|
Sensitive
|
lineage1.1.2
|
None
|
SRR29231479
|
RR-TB
|
lineage4.9
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR1172747
|
Sensitive
|
lineage1.1.2
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR3675572
|
Other
|
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR4818347
|
Other
|
lineage4.1.2
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR2100907
|
HR-TB
|
lineage1.1.2
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR28046210
|
HR-TB
|
lineage1.1.2
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
SRR22250135
|
Sensitive
|
lineage1.1.2
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR4796577
|
HR-TB
|
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
ERR1199132
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
SRR8380936
|
Sensitive
|
lineage1.1.2
|
in
|
ERR11252599
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR1173788
|
Sensitive
|
lineage4.9
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
SRR1175074
|
Other
|
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR3675520
|
Other
|
La1.7.X-unk4;lineage4.9
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR12708384
|
Sensitive
|
lineage4.9
|
None
|
SRR5341432
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR1169194
|
Other
|
lineage4.9
|
None
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
SRR28044839
|
Sensitive
|
lineage1.1.2
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13285068
|
Sensitive
|
lineage4.9
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
SRR1180450
|
Sensitive
|
lineage1.1.2
|
None
|
ERR4820335
|
Other
|
lineage4.1.2.1
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
SRR29772837
|
HR-TB
|
lineage1.1.2
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR1173384
|
Other
|
lineage4.9
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
SRR5818613
|
HR-TB
|
lineage1.1.2
|
dj
|
ERR400345
|
Other
|
lineage4.9
|
None
|
SRR1173027
|
Sensitive
|
lineage1.1.2
|
None
|
SRR13423649
|
Sensitive
|
lineage2.2.1
|
None
|
ERR266545
|
Other
|
lineage1.1.2
|
None
|
SRR3675461
|
RR-TB
|
lineage4.9
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
SRR29440896
|
Sensitive
|
lineage1.1.2
|
None
|
ERR216938
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR1196474
|
Other
|
lineage3.1.1
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
SRR3675236
|
Other
|
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
ERR11465025
|
Other
|
lineage4.1.1.3
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
SRR7535086
|
Other
|
|
None
|
SRR25827605
|
Pre-XDR-TB
|
lineage2.2.1;lineage3;lineage4
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
SRR1181091
|
Other
|
lineage2.2.1.1
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
ERR4816100
|
Sensitive
|
lineage1.1.2;lineage4.1.2.1;lineage4.1.3
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
ERR4818022
|
Sensitive
|
lineage1.1.2
|
gb
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR1180172
|
Other
|
lineage2.2.1
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR7496509
|
Other
|
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
ERR4818970
|
Sensitive
|
lineage1.1.2
|
None
|
ERR502532
|
Other
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR386879
|
HR-TB
|
lineage1.1.2
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
ERR11465510
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR28351342
|
HR-TB
|
lineage2.2.1;lineage4
|
None
|
SRR29772506
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR28045743
|
Sensitive
|
lineage1.1.2
|
None
|
ERR11252664
|
Other
|
lineage2.2.1
|
None
|
SRR28044307
|
Other
|
lineage1.1.2
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
SRR30182382
|
Sensitive
|
lineage1.1.2
|
None
|
SRR25827682
|
Other
|
|
None
|
ERR212001
|
HR-TB
|
|
None
|
SRR1172857
|
Other
|
|
None
|
ERR212033
|
Other
|
lineage4.9
|
None
|
ERR9787197
|
Other
|
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
SRR25340867
|
Sensitive
|
lineage1.1.2
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
ERR3445502
|
Sensitive
|
lineage4.9;lineage7
|
None
|
ERR736875
|
HR-TB
|
lineage4.9
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR1173363
|
Other
|
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR28046307
|
Sensitive
|
lineage1.1.2
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
SRR6045795
|
Sensitive
|
lineage2.2.1
|
None
|
SAMN03648080
|
HR-TB
|
lineage1.1.2
|
None
|
SRR1169544
|
Sensitive
|
lineage1.1.2
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
SRR1196566
|
Other
|
lineage4.9
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR12882699
|
Sensitive
|
lineage1.1.2
|
None
|
SRR6046739
|
Other
|
lineage1.1.2
|
None
|
SRR29050928
|
Other
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
SRR29016780
|
Other
|
lineage4.9
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR369151
|
Other
|
lineage4.9
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR2100172
|
Sensitive
|
lineage1.1.2
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
SRR1173355
|
Other
|
lineage4.9
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR13267017
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
ERR987765
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR29096420
|
Sensitive
|
lineage4.9
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
ERR117646
|
HR-TB
|
lineage1.1.2
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
ERR4816999
|
Other
|
|
None
|
ERR4800358
|
HR-TB
|
lineage3
|
in
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR123935
|
Sensitive
|
lineage1.1.2
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
ERR4821106
|
Other
|
lineage1.1.2
|
gb
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
ERR4814693
|
Sensitive
|
lineage1.1.2
|
None
|
SRR2100762
|
Other
|
lineage1.1.2
|
None
|
SRR28046165
|
Sensitive
|
lineage1.1.2
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
ERR4797308
|
Sensitive
|
lineage1.1.2
|
in
|
ERR9657193
|
Sensitive
|
lineage1.1.2
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
SRR8217918
|
HR-TB
|
lineage4.9
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
ERR9117709
|
Other
|
|
None
|
SRR3675449
|
Other
|
M.canetti;lineage4.9
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4797193
|
HR-TB
|
lineage1.1.2
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR11465352
|
Sensitive
|
lineage4.3.4.1
|
None
|
SRR26937071
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
SRR28351442
|
HR-TB
|
lineage3.1
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
ERR11465711
|
Other
|
lineage1.2.2.1;lineage4.4.1.1
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|