lineage | Count |
---|---|
lineage4.9 | 51 |
La1.7.1 | 1 |
37 | |
lineage4 | 25 |
lineage4.3.4 | 2 |
lineage3 | 1 |
lineage1.1.1 | 1 |
lineage2.1 | 1 |
lineage4.5 | 2 |
lineage4.8 | 2 |
lineage2.2.1 | 5 |
lineage4.2.1 | 1 |
lineage4.4.1.1;lineage1.2.2.1 | 2 |
lineage4.8.1 | 1 |
lineage4.7 | 1 |
La1.2 | 1 |
lineage2.2 | 2 |
lineage4.1.2.1 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
spoligotype | Count |
---|---|
None | 140 |
ID | Drug resistance | Lineage | Country iso2 | SRR12416840 | MDR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR14782405 | HR-TB | None | SRR20632814 | Sensitive | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR181744 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675456 | HR-TB | None | SRR5341330 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4816470 | Other | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341456 | Other | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212123 | Other | None | SRR3675574 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046492 | Other | None | ERR323037 | HR-TB | lineage4 | None | ERR11465711 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR4831117 | HR-TB | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR1063859 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3445503 | HR-TB | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR387051 | HR-TB | None | ERR4188247 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796577 | MDR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4811493 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR736856 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR752229 | Other | lineage4.5 | None | ERR9119669 | HR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None |
---|