Rv3596c - c.2154C>G
Drug resistance types
54 Sensitive
4 RR-TB
34 HR-TB
10 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 13 |
| 37 | |
| lineage2.1 | 1 |
| lineage4.1.1.2 | 2 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4 | 54 |
| lineage1.1.2 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1 | 8 |
| lineage4.9;lineage2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.1 | 1 |
| lineage4.8 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 136 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19295647 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR8692807 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR8692899 | Other | lineage4.9 | None | ERR1750909 | RR-TB | lineage4.1.1.2 | None | SRR8692887 | Other | None | ERR176751 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675555 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR212121 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR3675574 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4819051 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR2514821 | Other | lineage2.2.1 | None | ERR2514692 | Other | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045526 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR6045503 | HR-TB | None | SRR6045892 | Sensitive | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045327 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6896171 | RR-TB | lineage4.3.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR7496471 | Sensitive | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7496523 | Other | lineage4.7 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323107 | Other | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR1035122 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797064 | Sensitive | None | ERR4769474 | HR-TB | lineage4 | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4797184 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR6358979 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1173777 | Other | lineage4 | None | ERR9119669 | HR-TB | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None |
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