Rv0006 - c.820T>C


Drug resistance types
26 Sensitive 3 RR-TB 104 HR-TB 16 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 102 Other
lineage Counts
lineage Count
lineage4.2;La1.7 1
lineage4.9;La3 1
La1.2 1
lineage6.3;lineage2.2.1 1
125
lineage4.9 17
lineage4.1.1 1
lineage4.3.4.2.1 1
lineage2.2.1 20
lineage2.1 2
lineage4.3 1
lineage4 38
lineage4.8 2
lineage4.8;La3 1
lineage4.4.1.1 2
lineage2.2 4
La1.8.1 1
lineage4.1.2 1
lineage4.1.1.2 1
lineage3 3
lineage4.7 2
lineage4.1.2.1 6
lineage5.2 2
lineage4.4.1.2 1
lineage4.1.1.3 1
lineage2 3
lineage4.6.1.1 1
lineage4.8;lineage4.1 1
lineage1.1.2 1
lineage6.3.1 1
La3 1
lineage4.3.3 4
lineage2.2.1.1 4
lineage3.1 2
lineage4.3.4.1 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 256
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR23961559 Other lineage4.2;La1.7 None
SRR26399973 Other lineage4.9;La3 None
SRR23961549 Other La1.2 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR3675502 Other None
ERR4815604 HR-TB None
SRR3675473 Sensitive lineage4.9 None
ERR176793 Other lineage4.1.1 None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675465 HR-TB None
ERR158583 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SAMN02585910 Other lineage2.2.1 None
SRR3675488 HR-TB None
SRR3675501 HR-TB None
SRR3416776 Other lineage2.1 None
SRR3675221 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675222 Other None
SRR3675236 HR-TB None
ERR181824 HR-TB lineage4 None
SRR3675279 Other None
ERR176651 HR-TB None
SRR3675311 Other None
ERR176643 HR-TB None
ERR176751 HR-TB None
SRR3675312 HR-TB lineage4 None
SRR3675387 Sensitive None
SRR3675510 Other None
ERR2229542 Other lineage4.8 None
ERR4816999 Other None
ERR4817037 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR3675541 Sensitive lineage4.9 None
ERR212033 HR-TB None
SRR3675550 Other None
ERR212001 HR-TB None
ERR212138 HR-TB lineage4 None
ERR4817060 RR-TB None
SRR3675572 Other None
ERR212125 HR-TB lineage4 None
SRR3675574 HR-TB None
ERR4817893 Other lineage4.8;La3 None
ERR4816466 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3742665 HR-TB None
ERR4816656 HR-TB None
ERR4816585 Other lineage2.2 None
ERR4817735 Other lineage4.8 None
ERR4817896 HR-TB lineage2.2.1 None
ERR1035162 Other None
SRR7496472 Other None
ERR4818021 Other La1.8.1 None
SRR5341437 Sensitive lineage4.9 None
ERR234659 HR-TB None
ERR4818347 Other lineage4.1.2 None
ERR4818929 HR-TB None
SRR5341432 HR-TB lineage4 None
ERR4818252 Other lineage4.1.1.2 None
ERR4818394 Other lineage4.9 None
ERR4818615 Other None
SRR5341373 HR-TB lineage4 None
SRR5341400 HR-TB lineage4 None
SRR5341418 Other None
SRR5341293 HR-TB lineage4 None
ERR2514552 Sensitive lineage3 None
ERR4819781 Other lineage2.2.1 None
SRR5341303 RR-TB lineage4 None
SRR5341300 Other lineage4 None
SRR5341296 Sensitive lineage4.9 None
ERR2514692 Other None
SRR5341308 Sensitive lineage4 None
SRR5341302 HR-TB None
ERR2514821 Other lineage2.2.1 None
SRR5341333 HR-TB None
SRR5341313 HR-TB None
SRR5341315 Sensitive None
SRR5341323 Sensitive lineage4 None
ERR4819932 Other lineage4.7 None
SRR5341461 Sensitive lineage4 None
SRR6045327 HR-TB None
SRR6045503 HR-TB None
SRR6045526 HR-TB None
SRR5535933 HR-TB None
SRR6044790 HR-TB None
SRR6044855 Other lineage4.9 None
SRR6046046 Other None
SRR6046066 HR-TB None
SRR5341345 Sensitive lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR4821578 Other lineage4.1.2.1 None
ERR4821655 Sensitive lineage4 None
SRR6045892 Sensitive None
SRR6044838 Other lineage4.9 None
SRR6045399 Other None
SRR6046245 Other lineage4.9 None
SRR6046225 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046362 HR-TB None
ERR4872094 MDR-TB lineage5.2 None
ERR4830353 Other None
SRR6046460 HR-TB None
SRR6046824 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046482 HR-TB None
SRR6046540 HR-TB None
SRR6511621 HR-TB None
SRR6789626 Other None
SRR6785267 Other lineage2.2.1 None
ERR502908 HR-TB lineage2.2.1 None
SRR6832787 RR-TB lineage2.2.1 None
ERR502532 HR-TB None
ERR502889 Other None
ERR502510 Sensitive lineage4 None
SRR7496509 Other None
ERR502943 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR7496523 Other lineage4.7 None
SRR7535082 Sensitive lineage4 None
ERR323066 Sensitive lineage4 None
SRR7535086 Other None
ERR323045 HR-TB None
SRR7585435 Other lineage4.9 None
ERR323043 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR1034652 Other None
ERR323085 Sensitive lineage4 None
ERR323107 Other lineage4 None
ERR067699 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR323108 HR-TB lineage4 None
ERR067681 HR-TB None
ERR1063857 HR-TB None
ERR1035122 Sensitive None
ERR1063839 HR-TB lineage2.2 None
ERR11466044 Other lineage4.1.1.3 None
ERR1035157 Other lineage4.9 None
ERR1063859 HR-TB None
ERR1063862 HR-TB None
ERR133986 HR-TB None
ERR133825 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR3283036 HR-TB None
ERR137286 Sensitive lineage4 None
ERR5336148 Other None
ERR3283021 HR-TB None
ERR3283027 HR-TB None
ERR369159 Sensitive lineage4 None
ERR3439432 Other None
ERR3797046 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4407463 HR-TB None
ERR473332 Other lineage4 None
ERR3797069 Other None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR403298 HR-TB lineage4 None
ERR4769450 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4769521 HR-TB None
ERR4810741 HR-TB None
ERR4800341 Other lineage3 None
ERR4798406 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR4811022 HR-TB None
ERR736834 Sensitive lineage4 None
ERR6866807 HR-TB lineage4 None
ERR702406 HR-TB None
ERR702404 HR-TB None
ERR736848 HR-TB None
ERR736839 Other None
ERR736872 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR751326 Sensitive lineage4 None
ERR7821163 Other lineage2.2.1 None
ERR9117709 HR-TB None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9786604 Other None
ERR9786671 Other None
ERR9786843 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR990545 Other lineage3 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787139 Other lineage6.3.1 None
SRR1167384 Other lineage4 None
SRR1169306 Other None
SRR1169194 Other None
SRR1169249 Other La3 None
SRR1172728 MDR-TB None
SRR1172234 Other None
SRR1172858 MDR-TB lineage4.3.3 None
SRR1172817 HR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1173153 HR-TB None
SRR1172857 MDR-TB None
SRR1173118 Other None
SRR1172951 Other None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173363 HR-TB None
SRR1173484 Other lineage4 None
SRR1173400 Other None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173788 Other None
SRR1173778 Other None
SRR1175500 MDR-TB lineage4 None
SRR1175074 MDR-TB None
SRR1175508 Other lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180137 Other lineage2.2.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183145 Other lineage2.2.1 None
SRR1180270 Other lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR1181237 Sensitive lineage2.2 None
SRR1181289 Other lineage2.2.1 None
SRR1181328 Other lineage2.2.1 None
SRR1184294 HR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184346 HR-TB lineage3.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184381 MDR-TB None
SRR1184372 MDR-TB None
SRR1184380 HR-TB None
SRR1196494 MDR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1184388 Other None
SRR1196677 HR-TB lineage2 None
SRR1196546 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196566 HR-TB None
SRR1196768 MDR-TB None
SRR12416824 HR-TB None
SRR12142341 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR15368973 Other None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR1710057 Other lineage2.1 None
SRR19303884 HR-TB None
SRR18213713 HR-TB lineage4.5 None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None