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SRA data
Rv0001
- c.1218C>G
Drug resistance types
3 Sensitive
0 RR-TB
11 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
61 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
17
11
lineage2.1;lineage4.9
9
lineage2.1;lineage4.9;lineage6.3
5
lineage2.2.1
4
lineage4.9;lineage6.3
3
lineage4
2
lineage4.1.3
2
lineage2.1;lineage6.3
2
lineage4.1.2.1
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
77
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR2027263
Other
lineage4
None
ERR2229542
Other
lineage4.8
None
ERR2514821
Sensitive
lineage2.2.1
None
ERR323043
Other
lineage2.1;lineage4.9
None
ERR3283019
Other
lineage2.1;lineage4.9
None
ERR3283027
Other
lineage2.1;lineage4.9;lineage6.3
None
ERR3283036
Other
lineage2.1;lineage4.9
None
ERR3283044
Other
lineage4
None
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
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