Rv0001 - c.1218C>G


Drug resistance types
0 Sensitive 1 RR-TB 12 HR-TB 2 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 60 Other
lineage Counts
lineage Count
11
lineage4.9 17
lineage3 1
La1.2 1
lineage6.3.1 1
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage6.3 2
lineage2.2.1 4
lineage4.8 2
lineage4 2
lineage4.9;lineage6.3 3
lineage2.1;lineage4.9 9
lineage4.1.3 2
lineage2.1;lineage4.9;lineage6.3 5
lineage4.1.2.1 2
lineage4.7 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
La1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.2;lineage4.9 1
lineage2.1 1
La1.7;lineage4.2 1
spoligotype Counts
spoligotype Count
None 76
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675572 Other None
ERR9117709 Other None
SRR6789626 Other None
SRR3675236 Other None
SRR3675275 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR23961549 Other La1.2 None
ERR9787139 Other lineage6.3.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4817896 HR-TB lineage2.2.1 None
ERR9786569 Other lineage4.8 None
SRR3675214 Other lineage4.9 None
ERR3283044 Other lineage4 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR3675248 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
SRR7496523 Other lineage4.7 None
SRR7535086 Other None
SRR18213713 HR-TB None
ERR4407463 HR-TB None
ERR4816999 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR2514821 Other lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045555 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR6046133 HR-TB lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6046485 Other lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR7496509 Other None
SRR7496517 Other None
ERR9787197 Other None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR6045219 HR-TB lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675457 Other lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675311 Other lineage4.9 None
SRR6046594 Other lineage4.9 None