Rv0001 - c.1218C>G


Drug resistance types
3 Sensitive 0 RR-TB 11 HR-TB 1 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 60 Other
lineage Counts
lineage Count
lineage4 2
lineage4.9 17
lineage2.1;lineage4.3.2;lineage4.9 1
11
lineage3 1
lineage2.1;lineage4.9 9
La3;lineage2.1;lineage4.9 2
La1.7;lineage4.2 1
lineage4.1.2.1 2
lineage2.2.1 4
lineage4.9;lineage6.3 3
lineage2.1;lineage4.9;lineage6.3 5
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1;lineage4.9 1
lineage4.1.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.2 1
lineage4.7 1
lineage4.8 2
lineage2.1;lineage6.3 2
lineage2.1 1
lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage6.3.1 1
spoligotype Counts
spoligotype Count
None 76
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2027263 Other lineage4 None
SRR6046133 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR3675236 Other None
ERR4800341 Other lineage3 None
SRR6046594 Sensitive lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675311 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR9787197 Other None
ERR4819781 Other lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
SRR23961542 Other La1;lineage4.9 None
ERR9117709 Other None
ERR9786611 HR-TB lineage4.1.3 None
SRR7496509 Other None
SRR12416840 MDR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR23961549 Other La1.2 None
ERR4814352 Other lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR3675572 Other None
SRR3675457 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9786569 Other lineage4.8 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4816999 Other None
SRR6789626 Other None
SRR3675248 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR7535086 Other None
ERR4816466 HR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR2514821 Sensitive lineage2.2.1 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR18213713 HR-TB None
ERR9787139 Other lineage6.3.1 None
ERR4817896 HR-TB lineage2.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR7496517 Other None