Rv3596c - c.714G>C


Drug resistance types
73 Sensitive 29 RR-TB 140 HR-TB 41 MDR-TB 26 Pre-XDR-TB 1 XDR-TB 181 Other
lineage Counts
lineage Count
lineage4.1.1 2
lineage4.1.1.1 1
lineage6.3;lineage2.2.1 1
lineage3;lineage2.2.1 1
158
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage2.1 3
lineage2.2.1 43
lineage4.9;lineage3.1.1 1
lineage1.2.1.1 1
lineage4.1.2.1 17
lineage4 58
lineage4.3.4.2.1 4
lineage4.3 2
lineage4.8 10
lineage3 8
lineage4.9 84
lineage4.4.1.1 6
lineage3.1.2.1 1
lineage2.2 5
lineage3.1.3 1
lineage2.2.2 4
La1.8.1 4
lineage4.8;La3 2
lineage4.1 3
lineage4.2.2.2 1
lineage4.1.2 2
lineage4.3.3 5
lineage4;lineage1.1 1
lineage4.6.2.2 4
lineage4.7 3
lineage1.1.2 3
lineage4.9;lineage2.1 1
lineage5.2 2
lineage2.2.1.1 2
La2 1
lineage4.1.1.3 3
lineage4.2.1 3
lineage4.4.1.2 2
La1 2
lineage4.1.3 2
La1.3 1
La1.2 1
lineage2 4
lineage2.2.1.2 1
lineage4.6.1.1 1
lineage4.3.4 1
lineage4.3.2.1 2
lineage4.5 2
lineage1.1.3.1 1
lineage4.3.2 1
lineage6.1.3 2
lineage6 1
lineage6.3.1 1
La3 1
lineage4.4.1.1.1 2
lineage4.9;lineage2.2 1
lineage3.1 2
lineage4.3.4.1 1
lineage1.2.1.2 1
lineage4.4 1
La1.7.1 1
lineage7;lineage2.2.1.2 1
lineage4;lineage2.2 1
lineage2.2.1;La3 1
lineage4.9;La3 1
spoligotype Counts
spoligotype Count
None 491
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176793 Other lineage4.1.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
ERR176778 HR-TB None
ERR4815604 HR-TB None
ERR176751 HR-TB None
ERR176779 HR-TB None
SRR3675465 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3416776 Other lineage2.1 None
ERR158583 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675221 HR-TB None
SRR3675236 HR-TB None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR702405 Sensitive lineage2.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR176643 HR-TB None
SRR3675234 Other None
SRR3675232 Other lineage4.1.2.1 None
ERR181824 HR-TB lineage4 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675270 HR-TB None
ERR176568 Other lineage4.3 None
ERR4813263 MDR-TB lineage4.8 None
ERR176651 HR-TB None
SRR3675311 Other None
SRR3675502 Other None
ERR4815556 RR-TB lineage3 None
ERR181887 HR-TB None
ERR4815752 Other lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR4817060 RR-TB None
ERR4816999 Other None
ERR212033 HR-TB None
ERR212034 HR-TB None
ERR2027263 Other lineage4 None
ERR4817037 Other lineage4.9 None
SRR3675550 Other None
ERR212125 HR-TB lineage4 None
SRR3675572 Other None
ERR4817069 RR-TB None
SRR3742665 HR-TB None
SRR3675574 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4816729 Sensitive lineage4.9 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4816585 Other lineage2.2 None
ERR502912 Other lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
SRR4033549 HR-TB lineage2.2.2 None
ERR4817735 Other lineage4.8 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4818021 Other La1.8.1 None
ERR4817893 Other lineage4.8;La3 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR3275941 RR-TB lineage4.3 nl
ERR2446566 Other lineage4.1 None
ERR234659 HR-TB None
ERR2513470 Other lineage4.2.2.2 None
ERR4818347 Other lineage4.1.2 None
ERR4818394 Other lineage4.9 None
ERR4818536 Other lineage4.9 None
SRR5007204 Other lineage4.1.2.1 None
SRR5007168 RR-TB lineage4.9 None
SRR5007188 Other lineage4 None
SRR5341387 Other lineage4 None
SRR5341366 Sensitive lineage4 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5341461 Sensitive lineage4 None
ERR4818615 Other None
SRR5341373 HR-TB lineage4 None
SRR5341395 Sensitive lineage3 None
ERR4820854 Other lineage4.1.2.1 None
ERR4819280 Sensitive lineage4 None
SRR5341400 HR-TB lineage4 None
SRR5341425 Other lineage4 None
SRR5341418 Other None
ERR4819322 Other lineage4;lineage1.1 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819462 Other lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341432 HR-TB lineage4 None
ERR4819781 Other lineage2.2.1 None
SRR5341298 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341303 RR-TB lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR2514692 Other None
SRR5341455 Sensitive lineage4 None
SRR5341299 Sensitive lineage4 None
ERR4819863 RR-TB lineage4.9 None
ERR2514821 Other lineage2.2.1 None
SRR5341302 HR-TB None
ERR4819910 Other lineage4.9 None
ERR1023509 Other None
SRR5341308 Sensitive lineage4 None
ERR4819932 Other lineage4.7 None
SRR5341313 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341310 Other lineage1.1.2 None
SRR5341333 HR-TB None
SRR5341315 Sensitive None
SRR5341456 Other None
ERR2693232 Other lineage4.9 None
SRR5341467 Other lineage4 None
ERR2693238 HR-TB lineage4.9 None
SRR5341469 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2693231 Other None
ERR2693254 Other None
ERR2652925 HR-TB lineage4.9 None
ERR2693230 Other None
ERR4821550 Other lineage2.2.1 None
SRR6045526 HR-TB None
SRR5535933 HR-TB None
ERR2660539 Other lineage4.9 None
ERR2693257 Other None
ERR4821578 Other lineage4.1.2.1 None
ERR2693227 Other lineage4.9 None
SRR6044952 RR-TB lineage4.9 None
SRR6046152 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6044876 Sensitive lineage4 None
SRR6045892 Sensitive None
SRR6044855 Other lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6045327 HR-TB None
SRR6046210 Other lineage4 None
SRR6045233 HR-TB None
SRR6045053 Other None
SRR6046046 Other None
SRR6046250 Other lineage4.9 None
SRR6046066 HR-TB None
SRR6045384 Other lineage4.1.2 None
SRR6046299 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046362 HR-TB None
SRR6046815 Other lineage3 None
SRR6046482 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
ERR2851356 Sensitive lineage4.9 None
SRR6046460 HR-TB None
SRR6046492 Other None
SRR6046540 HR-TB None
SRR6046824 HR-TB None
ERR4831117 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6511621 HR-TB None
ERR485006 HR-TB lineage4.9 None
ERR323037 HR-TB lineage4 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR502478 RR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR502510 Sensitive lineage4 None
SRR6896383 RR-TB lineage4.4.1.1 None
SRR6789624 MDR-TB lineage4.1 None
SRR6832249 Other lineage2.2.1 None
SRR6832787 RR-TB lineage2.2.1 None
SRR6789626 Other None
ERR502524 HR-TB La2 None
ERR502889 Other None
ERR502532 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR8217918 HR-TB None
SRR7496517 Other None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR7535086 Other None
SRR7496509 Other None
SRR7496523 Other lineage4.7 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR7585435 Other lineage4.9 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7645971 Other lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7645927 Other lineage4.8 None
SRR7645928 RR-TB lineage4.7 None
SRR7755655 Other lineage4.1.2.1 None
ERR323043 HR-TB None
SRR9971122 MDR-TB lineage4.8 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323045 HR-TB None
ERR323066 Sensitive lineage4 None
ERR11465025 Other lineage4.1.1.3 None
ERR323085 Sensitive lineage4 None
ERR1035157 Other lineage4.9 None
ERR067681 HR-TB None
ERR1063858 HR-TB None
ERR1063862 HR-TB None
ERR11465024 Other lineage4.1.1.3 None
ERR1063855 Other lineage4 None
ERR1063896 Sensitive None
ERR11049020 Other lineage4.8 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3273109 MDR-TB lineage4 None
ERR133986 HR-TB None
ERR137286 Sensitive lineage4 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR3283008 Other lineage4.9 None
ERR3283010 Other La1 None
ERR3283006 RR-TB lineage4.9 None
ERR3283027 HR-TB None
ERR3283014 HR-TB None
ERR3283028 Other None
ERR3283024 Other None
ERR3283032 HR-TB None
ERR3283047 HR-TB None
ERR3283031 HR-TB None
ERR3283036 HR-TB None
ERR3445504 HR-TB None
ERR3283055 HR-TB None
ERR3439432 Other None
ERR3283058 Other lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR3797014 Other None
ERR3468488 RR-TB La1.8.1 None
ERR3797044 Other None
ERR3797043 HR-TB None
ERR3797017 Other None
ERR3797046 HR-TB None
ERR3797069 Other None
ERR3797062 RR-TB lineage4.9 None
ERR3797048 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR3797061 Other None
ERR3797063 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR3797073 HR-TB La1.8.1 None
ERR3797064 Sensitive None
ERR4407463 HR-TB None
ERR3797087 Sensitive lineage4 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR3797081 Sensitive lineage4 None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4024991 Other None
ERR403298 HR-TB lineage4 None
ERR4188247 HR-TB None
ERR4769436 Other La1.3 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769450 HR-TB None
ERR4769452 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769497 HR-TB La1.2 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4796254 Sensitive lineage4 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4798099 Other None
ERR4797474 Other None
ERR4797588 MDR-TB lineage3 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798262 HR-TB La1 None
ERR4798406 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR5917985 MDR-TB lineage2.2.1 None
ERR4799378 Sensitive lineage4 None
ERR12015083 Other lineage4.8;La3 None
ERR4810741 HR-TB None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4800341 Other lineage3 None
ERR4811022 HR-TB None
ERR4811493 HR-TB None
ERR5336148 Other None
ERR6358755 Other lineage4.6.1.1 None
ERR6359066 HR-TB lineage4 None
ERR6866410 Sensitive None
ERR6866022 Other None
ERR702406 HR-TB None
ERR6866639 Other None
ERR702404 HR-TB None
ERR736817 HR-TB lineage4.3.4 None
ERR736831 HR-TB lineage4.9 None
ERR736834 Sensitive lineage4 None
ERR736837 Other lineage4.9 None
ERR736839 Other None
ERR736835 HR-TB None
ERR736872 Sensitive lineage4 None
ERR736867 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736874 HR-TB None
ERR736875 HR-TB lineage4 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR751326 Sensitive lineage4 None
SRR21733183 RR-TB lineage1.1.2 None
ERR752229 Other lineage4.5 None
ERR7821163 Other lineage2.2.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117709 HR-TB None
ERR9786076 Sensitive lineage3 None
ERR9117805 Other lineage4.3.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9634265 Sensitive None
ERR9786569 Other lineage4.8 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786440 Other lineage4.1 None
ERR9786604 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786617 Other lineage4.1.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786694 Other lineage4.1.2.1 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787153 Other lineage6.1.3 None
ERR9787165 Other lineage6 None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None
ERR9787256 Other lineage6.1.3 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
SRR1169249 Other La3 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1158918 Sensitive lineage4 None
SRR1167384 Other lineage4 None
SRR1169194 Other None
SRR1169306 Other None
SRR1172717 Other lineage4.9 None
SRR1172234 Other None
SRR1172807 Sensitive lineage4.9 None
SRR1172728 MDR-TB None
SRR1173384 Other lineage4 None
SRR1172817 HR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173363 HR-TB None
SRR1172857 MDR-TB None
SRR1172951 Other None
SRR1172987 HR-TB lineage4.9 None
SRR1173166 Other lineage4.9 None
SRR1173484 Other lineage4 None
SRR1173400 Other None
SRR1173568 Other lineage4.9 None
SRR1173562 HR-TB lineage4 None
SRR1173706 Other lineage4.9 None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1173777 Other lineage4 None
SRR1173719 HR-TB lineage3 None
SRR1173788 Other None
SRR1173778 Other None
SRR1175074 MDR-TB None
SRR1175049 RR-TB None
SRR1175513 Other lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1181214 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181390 Sensitive lineage2 None
SRR1181368 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183054 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR1183145 Other lineage2.2.1 None
SRR1184294 HR-TB None
SRR1184021 Sensitive lineage4.9 None
SRR1184381 MDR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184329 MDR-TB lineage4.9 None
SRR1184372 MDR-TB None
SRR1184380 HR-TB None
SRR1196566 HR-TB None
SRR1196494 MDR-TB None
SRR1184388 Other None
SRR1196474 HR-TB lineage3.1 None
SRR1196546 HR-TB None
SRR1196768 MDR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR14782405 HR-TB None
SRR12142339 HR-TB lineage2.2.1 None
SRR12142341 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR12416824 HR-TB None
SRR16156804 RR-TB lineage4.9 None
SRR14801749 Sensitive None
SRR15368973 Other None
SRR16156697 MDR-TB lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
SRR1710057 Other lineage2.1 None
SRR16156832 RR-TB None
SRR16157123 Other lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18002981 Other lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003019 Other lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR18213713 HR-TB lineage4.5 None
SRR18910194 HR-TB lineage2.2 None
SRR19303884 HR-TB None
SRR20969708 HR-TB lineage2.2 None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR20969731 Other lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SRR25827682 Other None
SRR2101471 RR-TB lineage4.4.1.1 None
SRR21675425 HR-TB lineage4.8 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR11081258 Other lineage4.8 None
SRR21732980 Other lineage4.3.3 None
SRR8692800 Other lineage4 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692887 Other None
SRR8692790 RR-TB lineage4 None
SRR8692905 HR-TB None
SRR8692825 Other lineage4.9 None
SRR8692791 Other lineage4.9 None
SRR8692899 Other lineage4.9 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR26159043 Other lineage4.9 None
SRR26399973 Other lineage4.9;La3 None