SRR5341469
|
Other
|
lineage4
|
None
|
ERR4821811
|
RR-TB
|
lineage4.9
|
None
|
SRR5341470
|
HR-TB
|
|
None
|
ERR2693231
|
Other
|
|
None
|
ERR2693230
|
Other
|
|
None
|
ERR502511
|
Sensitive
|
lineage4.9;lineage2.1
|
None
|
ERR4821578
|
Other
|
lineage4.1.2.1
|
None
|
ERR2693254
|
Other
|
|
None
|
SRR6045503
|
HR-TB
|
|
None
|
SRR6045526
|
HR-TB
|
|
None
|
SRR6046117
|
RR-TB
|
lineage4.9
|
None
|
ERR4822101
|
Sensitive
|
lineage4.1.3;lineage1.1.2
|
None
|
ERR2693257
|
Other
|
|
None
|
ERR4821158
|
Sensitive
|
lineage4.9
|
None
|
ERR4821655
|
Sensitive
|
lineage4
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR2693227
|
Other
|
lineage4.9
|
None
|
SRR5709967
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6045664
|
Other
|
lineage4.2.1
|
None
|
SRR6045555
|
HR-TB
|
|
None
|
SRR6044790
|
HR-TB
|
|
None
|
SRR6045706
|
Sensitive
|
lineage4
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
SRR6045832
|
HR-TB
|
lineage4.9
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
SRR6044838
|
Other
|
lineage4.9
|
None
|
SRR6044855
|
Other
|
lineage4.9
|
None
|
SRR6044875
|
HR-TB
|
lineage4.9
|
None
|
SRR6044876
|
Sensitive
|
lineage4
|
None
|
SRR6044952
|
RR-TB
|
lineage4.9
|
None
|
SRR6046133
|
HR-TB
|
|
None
|
SRR6045002
|
MDR-TB
|
lineage4.9
|
None
|
SRR6045957
|
Other
|
lineage4.9
|
None
|
SRR6045050
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR6045233
|
HR-TB
|
|
None
|
SRR6045053
|
Other
|
|
None
|
SRR6046210
|
Other
|
lineage4
|
None
|
SRR6046046
|
Other
|
|
None
|
SRR6045264
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6046066
|
HR-TB
|
|
None
|
SRR6045327
|
HR-TB
|
|
None
|
SRR6045371
|
Sensitive
|
lineage4.2.1
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
SRR6046305
|
Other
|
lineage4.9
|
None
|
SRR6045399
|
Other
|
|
None
|
SRR6046225
|
HR-TB
|
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR6046259
|
Sensitive
|
lineage4.9
|
None
|
SRR6046275
|
Other
|
lineage3.1.1
|
None
|
SRR6046397
|
Other
|
|
None
|
SRR6046299
|
HR-TB
|
|
None
|
SRR6046385
|
Other
|
lineage4.9
|
None
|
SRR6046362
|
HR-TB
|
|
None
|
SRR6046497
|
Other
|
lineage4.9
|
None
|
ERR2851356
|
Sensitive
|
lineage4.9
|
None
|
SRR6046492
|
Other
|
|
None
|
ERR4829530
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR6046460
|
HR-TB
|
|
None
|
SRR6046482
|
HR-TB
|
|
None
|
SRR6046644
|
HR-TB
|
|
None
|
SRR6046540
|
HR-TB
|
|
None
|
SRR6046594
|
HR-TB
|
lineage4
|
None
|
SRR6046521
|
Other
|
lineage4.4.1.1
|
None
|
SRR6046611
|
HR-TB
|
lineage4.9
|
None
|
SRR6046824
|
HR-TB
|
|
None
|
SRR6046802
|
Other
|
lineage4
|
None
|
SRR6046863
|
Sensitive
|
lineage1.1.2
|
None
|
SRR6511621
|
HR-TB
|
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6046878
|
HR-TB
|
lineage4
|
None
|
SRR6046897
|
Sensitive
|
lineage4
|
None
|
ERR4831638
|
Sensitive
|
|
None
|
ERR4831620
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR6982196
|
Sensitive
|
|
None
|
ERR4831657
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR502510
|
Sensitive
|
lineage4
|
None
|
SRR6832178
|
HR-TB
|
lineage4.2.1.1
|
None
|
SRR6789624
|
MDR-TB
|
lineage4.1
|
None
|
SRR6789626
|
Other
|
|
None
|
SRR6982239
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR6832787
|
RR-TB
|
lineage2.2.1
|
None
|
ERR502532
|
HR-TB
|
|
None
|
ERR502524
|
HR-TB
|
La2
|
None
|
ERR502889
|
Other
|
|
None
|
ERR502943
|
HR-TB
|
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
SRR9970980
|
Other
|
lineage4.1.2
|
None
|
SRR8217918
|
HR-TB
|
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
SRR7496509
|
Other
|
|
None
|
SRR7496517
|
Other
|
|
None
|
SRR9613550
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR7535082
|
Sensitive
|
lineage4
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR9970978
|
Sensitive
|
lineage4.1.2
|
None
|
SRR7535086
|
Other
|
|
None
|
SRR9970979
|
Sensitive
|
lineage4.8
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR9971113
|
Other
|
lineage2.2.1
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR9971080
|
RR-TB
|
lineage2.2.1
|
None
|
SRR9971122
|
MDR-TB
|
lineage4.8
|
None
|
ERR323039
|
HR-TB
|
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
ERR017781
|
Other
|
lineage3
|
None
|
ERR323041
|
HR-TB
|
|
None
|
ERR323053
|
HR-TB
|
|
None
|
ERR323066
|
Sensitive
|
lineage4
|
None
|
ERR323043
|
HR-TB
|
|
None
|
ERR323107
|
Other
|
lineage4
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR067699
|
HR-TB
|
lineage4
|
None
|
ERR019855
|
Other
|
lineage3
|
None
|
ERR067681
|
HR-TB
|
|
None
|
ERR323085
|
Sensitive
|
lineage4
|
None
|
ERR1023502
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1035163
|
Sensitive
|
lineage4.3.3
|
sa
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
|
None
|
ERR1035158
|
Sensitive
|
lineage4.3.3
|
sa
|
ERR1063839
|
HR-TB
|
lineage2.2
|
None
|
ERR1063857
|
HR-TB
|
|
None
|
ERR1063855
|
Other
|
lineage4
|
None
|
ERR1063883
|
Sensitive
|
lineage4
|
None
|
ERR1063862
|
HR-TB
|
|
None
|
ERR1063858
|
HR-TB
|
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR137286
|
Sensitive
|
lineage4
|
None
|
ERR108471
|
HR-TB
|
lineage4
|
None
|
ERR133825
|
Sensitive
|
lineage4
|
None
|
ERR133986
|
HR-TB
|
|
None
|
ERR1213932
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR3273109
|
MDR-TB
|
lineage4
|
None
|
ERR323115
|
Sensitive
|
lineage4
|
None
|
ERR3283027
|
HR-TB
|
|
None
|
ERR3283014
|
HR-TB
|
|
None
|
ERR3283021
|
HR-TB
|
|
None
|
ERR3283028
|
Other
|
|
None
|
ERR3283024
|
Other
|
|
None
|
ERR349296
|
Sensitive
|
lineage4
|
None
|
ERR3283032
|
HR-TB
|
|
None
|
ERR3283031
|
HR-TB
|
|
None
|
ERR3283043
|
Other
|
lineage4.9
|
None
|
ERR3283036
|
HR-TB
|
|
None
|
ERR3283047
|
HR-TB
|
|
None
|
ERR3439432
|
Other
|
|
None
|
ERR3445504
|
HR-TB
|
|
None
|
ERR349264
|
Sensitive
|
lineage4
|
None
|
ERR349265
|
Sensitive
|
lineage4
|
None
|
ERR349298
|
Sensitive
|
lineage4
|
None
|
ERR3283051
|
Other
|
lineage4.9
|
None
|
ERR3283057
|
HR-TB
|
lineage4
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR349299
|
Sensitive
|
lineage4
|
None
|
ERR363445
|
Sensitive
|
lineage4
|
None
|
ERR363426
|
Sensitive
|
lineage4
|
None
|
ERR363437
|
Sensitive
|
lineage4
|
None
|
ERR349330
|
Sensitive
|
lineage4
|
None
|
ERR363421
|
Sensitive
|
lineage4
|
None
|
ERR363446
|
Sensitive
|
lineage4
|
None
|
ERR363453
|
Sensitive
|
lineage4
|
None
|
ERR363449
|
Sensitive
|
lineage4
|
None
|
ERR363447
|
Sensitive
|
lineage4
|
None
|
ERR363479
|
Sensitive
|
lineage4
|
None
|
ERR363456
|
Sensitive
|
lineage4
|
None
|
ERR363474
|
Sensitive
|
lineage4
|
None
|
ERR363490
|
Sensitive
|
lineage4
|
None
|
ERR363499
|
Sensitive
|
lineage4
|
None
|
ERR363498
|
Sensitive
|
lineage4
|
None
|
ERR363506
|
Sensitive
|
lineage4
|
None
|
ERR363500
|
Sensitive
|
lineage4
|
None
|
ERR363502
|
Sensitive
|
lineage4
|
None
|
ERR369159
|
Sensitive
|
lineage4
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
ERR363509
|
Sensitive
|
lineage4
|
None
|
ERR369151
|
Sensitive
|
lineage4.9
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR369158
|
Sensitive
|
lineage4
|
None
|
ERR369162
|
Sensitive
|
lineage4
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR369163
|
Sensitive
|
lineage4
|
None
|
ERR3797036
|
HR-TB
|
|
None
|
ERR373947
|
Sensitive
|
lineage4
|
None
|
ERR373945
|
HR-TB
|
lineage4
|
None
|
ERR373946
|
Sensitive
|
lineage4
|
None
|
ERR3797014
|
Other
|
|
None
|
ERR3797017
|
Other
|
|
None
|
ERR3797069
|
Other
|
|
None
|
ERR3797047
|
HR-TB
|
lineage4
|
None
|
ERR3797048
|
HR-TB
|
|
None
|
ERR3797058
|
Other
|
lineage4.9
|
None
|
ERR3797061
|
Other
|
|
None
|
ERR3797044
|
Other
|
|
None
|
ERR3797065
|
MDR-TB
|
lineage4
|
None
|
ERR3797063
|
HR-TB
|
|
None
|
ERR3797073
|
HR-TB
|
La1.8.1
|
None
|
ERR3797064
|
Sensitive
|
|
None
|
ERR3797079
|
Sensitive
|
lineage4
|
None
|
ERR3797087
|
Sensitive
|
lineage4
|
None
|
ERR3797081
|
Sensitive
|
lineage4
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
ERR3799304
|
Other
|
lineage6.1.1
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR3806850
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR400320
|
Sensitive
|
lineage4
|
None
|
ERR405219
|
HR-TB
|
lineage4;lineage3.1
|
None
|
ERR400326
|
Sensitive
|
lineage4
|
None
|
ERR400336
|
Sensitive
|
lineage4
|
None
|
ERR400345
|
Other
|
lineage4
|
None
|
ERR400538
|
RR-TB
|
lineage5.1.2
|
None
|
ERR4024991
|
Other
|
|
None
|
ERR405209
|
Sensitive
|
lineage4
|
None
|
ERR403298
|
HR-TB
|
lineage4
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
ERR4188247
|
HR-TB
|
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
ERR473303
|
Sensitive
|
lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
ERR4769493
|
Pre-XDR-TB
|
lineage4.9;La1.3
|
None
|
ERR4769433
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR4769446
|
Sensitive
|
lineage4.9;La1.3
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
ERR4769474
|
HR-TB
|
lineage4
|
None
|
ERR4769408
|
Other
|
La1.3
|
None
|
ERR4769442
|
HR-TB
|
lineage4
|
None
|
ERR4769516
|
Other
|
La1.3
|
None
|
ERR4797184
|
Sensitive
|
lineage4
|
None
|
ERR4769521
|
HR-TB
|
|
None
|
ERR4769550
|
Other
|
lineage4.9;La1.3
|
None
|
ERR4796254
|
Sensitive
|
lineage4
|
None
|
ERR4796577
|
MDR-TB
|
|
None
|
ERR4769552
|
Other
|
La1.3
|
None
|
ERR4769554
|
RR-TB
|
lineage4.9
|
None
|
ERR4796472
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4796929
|
Sensitive
|
lineage4
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2
|
None
|
ERR4797350
|
Sensitive
|
lineage4.9
|
None
|
ERR4797193
|
HR-TB
|
lineage1.1.2
|
None
|
ERR4797264
|
Sensitive
|
|
None
|
ERR4797313
|
HR-TB
|
|
None
|
ERR4798262
|
HR-TB
|
La1
|
None
|
ERR4797474
|
Other
|
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
ERR4798099
|
Other
|
|
None
|
ERR4798406
|
HR-TB
|
|
None
|
ERR4798431
|
HR-TB
|
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR4798504
|
Other
|
lineage3
|
None
|
ERR4798648
|
HR-TB
|
lineage3.1.2
|
None
|
ERR4799378
|
Sensitive
|
lineage4
|
None
|
ERR4799547
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4811105
|
HR-TB
|
|
None
|
ERR4810624
|
HR-TB
|
lineage2.2
|
None
|
ERR4811022
|
HR-TB
|
|
None
|
ERR4811030
|
Sensitive
|
|
None
|
ERR4810741
|
HR-TB
|
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
ERR4811142
|
MDR-TB
|
|
None
|
ERR5336148
|
Other
|
|
None
|
ERR6358979
|
Other
|
|
None
|
ERR6358951
|
HR-TB
|
lineage4
|
None
|
ERR6359069
|
Other
|
lineage4.9
|
None
|
ERR6359045
|
HR-TB
|
|
None
|
ERR6359066
|
HR-TB
|
lineage4
|
None
|
ERR6359070
|
Other
|
lineage4.9
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
ERR6866022
|
Other
|
|
None
|
ERR6866639
|
Other
|
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR6866410
|
Sensitive
|
|
None
|
ERR736872
|
Sensitive
|
lineage4
|
None
|
ERR702406
|
HR-TB
|
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
ERR736834
|
Sensitive
|
lineage4
|
None
|
ERR736837
|
Other
|
lineage4.9
|
None
|
ERR736839
|
Other
|
|
None
|
ERR736848
|
HR-TB
|
|
None
|
ERR736865
|
HR-TB
|
|
None
|
ERR736867
|
HR-TB
|
|
None
|
ERR6866807
|
HR-TB
|
lineage4
|
None
|
ERR702404
|
HR-TB
|
|
None
|
ERR736835
|
HR-TB
|
|
None
|
ERR736856
|
HR-TB
|
lineage4
|
None
|
ERR751326
|
Sensitive
|
lineage4
|
None
|
ERR736875
|
HR-TB
|
lineage4
|
None
|
ERR736874
|
HR-TB
|
|
None
|
ERR7801175
|
RR-TB
|
lineage4.6.5
|
None
|
ERR7821123
|
Other
|
lineage1.1.3.2
|
None
|
ERR7801176
|
RR-TB
|
lineage4.6.5
|
None
|
ERR9117709
|
HR-TB
|
|
None
|
ERR9786440
|
Other
|
lineage4.1
|
None
|
ERR9117721
|
HR-TB
|
lineage1.1.2
|
None
|
ERR9117805
|
Other
|
lineage4.3.2
|
None
|
ERR9119669
|
HR-TB
|
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR9786076
|
Sensitive
|
lineage3
|
None
|
ERR9786384
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR9786592
|
Sensitive
|
lineage4.3.4.2
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786604
|
Other
|
|
None
|
ERR9786617
|
Other
|
lineage4.1.1
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
ERR9786597
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786671
|
Other
|
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786911
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR9786986
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR9787030
|
Sensitive
|
lineage6
|
None
|
ERR9787153
|
Other
|
lineage6.1.3
|
None
|
ERR9787014
|
Other
|
lineage6.1.1
|
None
|
ERR9787165
|
Other
|
lineage6
|
None
|
SRR10315567
|
Other
|
lineage2.2.1
|
None
|
ERR9787197
|
Other
|
|
None
|
ERR987722
|
HR-TB
|
|
None
|
ERR987729
|
HR-TB
|
lineage3.1.2.2;lineage3.1.2.1
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
ERR987707
|
MDR-TB
|
lineage4.7
|
None
|
SRR10808399
|
Sensitive
|
lineage4
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR1049675
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1062919
|
HR-TB
|
lineage2.2.1
|
None
|
SRR11462861
|
Other
|
La1.8.1
|
None
|
SRR10809074
|
Sensitive
|
lineage4
|
None
|
SRR11349186
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1140724
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1158918
|
Sensitive
|
lineage4
|
None
|
SRR1169194
|
Other
|
|
None
|
ERR11050385
|
Sensitive
|
lineage4.3.3
|
None
|
SRR1172310
|
HR-TB
|
|
None
|
SRR1172146
|
Sensitive
|
lineage4.9
|
None
|
SRR1172214
|
HR-TB
|
lineage4.9
|
None
|
SRR1172234
|
Other
|
|
None
|
SRR1172728
|
MDR-TB
|
|
None
|
SRR1172717
|
Other
|
lineage4.9
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
SRR1172844
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
SRR1172817
|
HR-TB
|
|
None
|
SRR1172857
|
MDR-TB
|
|
None
|
SRR1173118
|
Other
|
|
None
|
SRR1172951
|
Other
|
|
None
|
SRR1173153
|
HR-TB
|
|
None
|
SRR1173166
|
Other
|
lineage4.9
|
None
|
SRR1173218
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1173385
|
Sensitive
|
lineage4.9
|
None
|
SRR1173330
|
Pre-XDR-TB
|
lineage4
|
None
|
SRR1173363
|
HR-TB
|
|
None
|
SRR1173400
|
Other
|
|
None
|
SRR1173384
|
Other
|
lineage4
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
SRR1173484
|
Other
|
lineage4
|
None
|
SRR1173515
|
HR-TB
|
lineage4.9
|
None
|
SRR1173568
|
Other
|
lineage4.9
|
None
|
SRR1173629
|
Other
|
|
None
|
SRR1173562
|
HR-TB
|
lineage4
|
None
|
SRR1173633
|
HR-TB
|
lineage4.9
|
None
|
SRR1173777
|
Other
|
lineage4
|
None
|
SRR1173788
|
Other
|
|
None
|
SRR1173778
|
Other
|
|
None
|
SRR1175496
|
HR-TB
|
lineage4.9
|
None
|
SRR1174897
|
HR-TB
|
|
None
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
SRR1175049
|
RR-TB
|
|
None
|
SRR1175074
|
MDR-TB
|
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
SRR1180172
|
Other
|
lineage2.2.1
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR1175508
|
Other
|
lineage4.9
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
SRR1180148
|
Sensitive
|
lineage4.9
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
SRR1175500
|
MDR-TB
|
lineage4
|
None
|
SRR1175507
|
MDR-TB
|
lineage4
|
None
|
SRR1175513
|
Other
|
lineage4.9
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
SRR1180270
|
Other
|
lineage2.2.1
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR1180446
|
Other
|
lineage4.9
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9;lineage2.2
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
SRR1180440
|
Other
|
lineage4.9
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
SRR1180996
|
HR-TB
|
lineage4
|
None
|
SRR1181091
|
Other
|
lineage2.2.1.1
|
None
|
SRR1181214
|
Other
|
lineage4.9
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR1181368
|
Other
|
lineage4.9
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
SRR1181390
|
Sensitive
|
lineage2
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
SRR1183106
|
Other
|
lineage2.2.1.1
|
None
|
SRR1183965
|
Sensitive
|
lineage4.9
|
None
|
SRR1183145
|
Other
|
lineage2.2.1
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1184024
|
Other
|
lineage2.2.1.1
|
None
|
SRR1184294
|
HR-TB
|
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
SRR1184308
|
Sensitive
|
lineage4.9
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
SRR1184312
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR1184380
|
HR-TB
|
|
None
|
SRR1196474
|
HR-TB
|
lineage3.1
|
None
|
SRR1184388
|
Other
|
|
None
|
SRR1196494
|
MDR-TB
|
|
None
|
SRR1196677
|
HR-TB
|
lineage2
|
None
|
SRR1196566
|
HR-TB
|
|
None
|
SRR1196571
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1196545
|
HR-TB
|
lineage4.9
|
None
|
SRR1196546
|
HR-TB
|
|
None
|
SRR12416824
|
HR-TB
|
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
SRR12142341
|
HR-TB
|
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
SRR13837614
|
Sensitive
|
lineage4.9
|
None
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR13837580
|
HR-TB
|
lineage4.9
|
None
|
SRR13861305
|
Other
|
lineage4.9
|
None
|
SRR13861168
|
RR-TB
|
lineage4.9
|
None
|
SRR13861261
|
Sensitive
|
lineage4.9
|
None
|
SRR13861288
|
Other
|
lineage4.9
|
None
|
SRR13861400
|
Other
|
lineage4.9
|
None
|
SRR13861324
|
Other
|
lineage4.9
|
None
|
SRR13861372
|
Other
|
lineage4.9
|
None
|
SRR13861386
|
HR-TB
|
lineage4.9
|
None
|
SRR13861396
|
HR-TB
|
lineage4.9
|
None
|
SRR13861519
|
Other
|
lineage4.9
|
None
|
SRR13861424
|
RR-TB
|
lineage4.9
|
None
|
SRR13861636
|
Sensitive
|
lineage4.9
|
None
|
SRR13861510
|
Other
|
lineage4.9
|
None
|
SRR13861571
|
RR-TB
|
lineage4.9
|
None
|
SRR13861556
|
Other
|
lineage4.9
|
None
|
SRR13861575
|
Other
|
lineage4.9
|
None
|
SRR13861629
|
RR-TB
|
lineage4.9
|
None
|
SRR13861646
|
Other
|
lineage4.9
|
None
|
SRR16278274
|
Other
|
La1.4
|
None
|
SRR14066533
|
Sensitive
|
lineage1.1.1
|
None
|
SRR15368973
|
Other
|
|
None
|
SRR14801749
|
Sensitive
|
|
None
|
SRR14802079
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR16157123
|
Other
|
lineage4.9
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR17658565
|
Other
|
lineage3
|
None
|
SRR18002874
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18002974
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18002881
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2
|
None
|
SRR18003030
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18003049
|
Other
|
lineage2.2.1
|
None
|
SRR18213713
|
HR-TB
|
lineage4.5
|
None
|
SRR18909918
|
Other
|
lineage2.2.1.1
|
None
|
SRR18002984
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR18003012
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR18003046
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR19304036
|
HR-TB
|
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
SRR19303820
|
RR-TB
|
lineage4.8
|
None
|
SRR19303884
|
HR-TB
|
|
None
|
SRR12708416
|
Sensitive
|
lineage4.1
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22424765
|
MDR-TB
|
lineage4
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
SRR2010299
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20969677
|
HR-TB
|
lineage2
|
None
|
SRR8692905
|
HR-TB
|
|
None
|
SRR8692893
|
Other
|
lineage4.9
|
None
|
SRR8692907
|
Other
|
lineage4.9
|
None
|
SRR8692782
|
Other
|
lineage4.9
|
None
|
SRR8692871
|
Other
|
lineage4.9
|
None
|
SRR3675472
|
Sensitive
|
lineage4.9
|
None
|
SRR3675455
|
Sensitive
|
lineage4
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
SRR3675465
|
HR-TB
|
|
None
|
ERR4815604
|
HR-TB
|
|
None
|
ERR4815797
|
HR-TB
|
lineage1.1.2
|
None
|
ERR176793
|
Other
|
lineage4.1.1
|
None
|
SRR3675477
|
Other
|
lineage4.9
|
None
|
ERR702405
|
Sensitive
|
lineage2.1
|
None
|
ERR779852
|
Sensitive
|
lineage4.9;lineage4.8.1;lineage4.1.1
|
None
|
ERR158583
|
HR-TB
|
|
None
|
ERR4815310
|
Other
|
|
None
|
ERR4814396
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR161034
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
SRR3675221
|
HR-TB
|
|
None
|
ERR4815471
|
Other
|
lineage4.9
|
None
|
ERR4814352
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675209
|
Sensitive
|
lineage4.9
|
None
|
ERR4814639
|
HR-TB
|
lineage4
|
None
|
SRR3675210
|
Sensitive
|
lineage4.9
|
None
|
ERR4814683
|
Sensitive
|
lineage4.1.3;lineage4.1.2.1;lineage1.1.2
|
None
|
SRR3675229
|
Other
|
lineage4
|
None
|
SRR3675236
|
HR-TB
|
|
None
|
SRR3675246
|
Sensitive
|
lineage4
|
None
|
SRR3675234
|
Other
|
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
ERR4815489
|
Sensitive
|
lineage4.9
|
None
|
SRR3675266
|
Sensitive
|
lineage4.9
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
SRR3675249
|
Sensitive
|
lineage4.9
|
None
|
ERR181824
|
HR-TB
|
lineage4
|
None
|
ERR176518
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR4815515
|
Sensitive
|
lineage4.1.3;lineage1.1.2
|
None
|
SRR3675283
|
Sensitive
|
lineage4.9
|
None
|
SRR3675270
|
HR-TB
|
|
None
|
SRR3675279
|
Other
|
|
None
|
ERR3275201
|
Sensitive
|
lineage4.8
|
nl
|
ERR4815550
|
Other
|
lineage4
|
None
|
SRR3675311
|
Other
|
|
None
|
SRR3675292
|
Sensitive
|
lineage4
|
None
|
ERR4815556
|
RR-TB
|
lineage3
|
None
|
ERR176675
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR3675312
|
HR-TB
|
lineage4
|
None
|
SRR3675318
|
Other
|
lineage4.9
|
None
|
ERR176740
|
HR-TB
|
|
None
|
SRR3675387
|
Sensitive
|
|
None
|
ERR4816982
|
Other
|
lineage4
|
None
|
SRR3675502
|
Other
|
|
None
|
ERR2228965
|
Other
|
lineage4.8
|
None
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR3675503
|
Sensitive
|
lineage4.9
|
None
|
ERR4816964
|
Other
|
lineage4.9
|
None
|
SRR3675510
|
Other
|
|
None
|
ERR4816151
|
Other
|
lineage4.8
|
None
|
SRR3675522
|
Other
|
|
None
|
SRR3675527
|
RR-TB
|
lineage4.9
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
ERR4816113
|
Sensitive
|
lineage4.1.1
|
None
|
SRR3675548
|
Sensitive
|
lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
SRR3675542
|
Other
|
lineage4.9
|
None
|
ERR4816999
|
Other
|
|
None
|
ERR4816100
|
Sensitive
|
lineage4.1.3;lineage4.1.2.1;lineage1.1.2
|
None
|
SRR3675547
|
Other
|
lineage4.9
|
None
|
ERR2027290
|
RR-TB
|
lineage3.1
|
None
|
SRR3675574
|
HR-TB
|
|
None
|
ERR2229084
|
Sensitive
|
lineage4.8
|
dk
|
SRR3675553
|
Sensitive
|
lineage4.9
|
None
|
ERR212001
|
HR-TB
|
|
None
|
SRR3675550
|
Other
|
|
None
|
ERR4817060
|
RR-TB
|
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR3675577
|
Sensitive
|
lineage4.9
|
None
|
ERR4817114
|
Sensitive
|
|
None
|
ERR216965
|
HR-TB
|
lineage4.9
|
None
|
ERR4816466
|
HR-TB
|
|
None
|
SRR3675571
|
HR-TB
|
|
None
|
ERR502912
|
Other
|
lineage2.2.1
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR3742665
|
HR-TB
|
|
None
|
ERR4816585
|
Other
|
lineage2.2
|
None
|
ERR4816762
|
Other
|
lineage4;lineage2
|
None
|
ERR4816656
|
HR-TB
|
|
None
|
ERR4815815
|
Sensitive
|
lineage4
|
None
|
ERR4816904
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4817998
|
Other
|
lineage3
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
ERR4817735
|
Other
|
lineage4.8
|
None
|
ERR4818710
|
Sensitive
|
lineage4.9
|
None
|
ERR4819068
|
Sensitive
|
lineage4.1;lineage1
|
None
|
ERR4817893
|
Other
|
lineage4.8;La3
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4817915
|
RR-TB
|
lineage4.9
|
None
|
ERR4818021
|
Other
|
La1.8.1
|
None
|
ERR4818086
|
Sensitive
|
lineage4.8
|
None
|
ERR234659
|
HR-TB
|
|
None
|
ERR4818252
|
Other
|
lineage4.1.1.2
|
None
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR245716
|
Sensitive
|
lineage2.2.1
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4818615
|
Other
|
|
None
|
ERR4818394
|
Other
|
lineage4.9
|
None
|
ERR2512770
|
Other
|
lineage4.2.1
|
None
|
ERR2513283
|
Other
|
lineage5.1.4
|
None
|
ERR4818607
|
Sensitive
|
lineage4.9
|
None
|
ERR4818347
|
Other
|
lineage4.1.2
|
None
|
ERR4818929
|
HR-TB
|
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR2446570
|
Sensitive
|
lineage4.8
|
nl
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
SRR5007188
|
Other
|
lineage4
|
None
|
SRR5007204
|
Other
|
lineage4.1.2.1
|
None
|
SRR5341366
|
Sensitive
|
lineage4
|
None
|
ERR4818624
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR5341373
|
HR-TB
|
lineage4
|
None
|
ERR2513724
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR5341461
|
Sensitive
|
lineage4
|
None
|
SRR5341387
|
Other
|
lineage4
|
None
|
ERR4819357
|
Other
|
lineage4.9
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
SRR5341396
|
Other
|
lineage4
|
None
|
ERR4819322
|
Other
|
lineage4;lineage1.1
|
None
|
SRR5341400
|
HR-TB
|
lineage4
|
None
|
SRR5341418
|
Other
|
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR5341425
|
Other
|
lineage4
|
None
|
ERR4819462
|
Other
|
lineage4
|
None
|
ERR4820410
|
Pre-XDR-TB
|
lineage3.1.1
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR2514552
|
Sensitive
|
lineage3
|
None
|
ERR2514390
|
Sensitive
|
lineage4.9;lineage3.1.2.1
|
None
|
SRR5341432
|
HR-TB
|
lineage4
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
SRR5341293
|
HR-TB
|
lineage4
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
SRR5341300
|
Other
|
lineage4
|
None
|
SRR5341298
|
Sensitive
|
lineage4
|
None
|
ERR4819809
|
HR-TB
|
lineage4.6.2.2
|
None
|
SRR5341455
|
Sensitive
|
lineage4
|
None
|
SRR5341299
|
Sensitive
|
lineage4
|
None
|
SRR5341302
|
HR-TB
|
|
None
|
ERR2514692
|
Other
|
|
None
|
SRR5341303
|
RR-TB
|
lineage4
|
None
|
ERR2446382
|
Other
|
lineage4
|
None
|
ERR2514821
|
Other
|
lineage2.2.1
|
None
|
ERR4819933
|
Other
|
lineage4.9
|
None
|
SRR5341308
|
Sensitive
|
lineage4
|
None
|
SRR5341313
|
HR-TB
|
|
None
|
SRR5341315
|
Sensitive
|
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
SRR5341323
|
Sensitive
|
lineage4
|
None
|
SRR5341310
|
Other
|
lineage1.1.2
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5341333
|
HR-TB
|
|
None
|
SRR5341319
|
Other
|
lineage3
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
ERR2693232
|
Other
|
lineage4.9
|
None
|
SRR5341456
|
Other
|
|
None
|
SRR5341465
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5341467
|
Other
|
lineage4
|
None
|