Rv3596c - c.1011G>C
Drug resistance types
195 Sensitive
25 RR-TB
174 HR-TB
42 MDR-TB
18 Pre-XDR-TB
0 XDR-TB
220 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 125 |
| lineage4.9 | 150 |
| 173 | |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1.2.1 | 23 |
| lineage4.1.3;lineage1.1.2 | 2 |
| lineage2.2.1 | 47 |
| lineage4.2.1 | 4 |
| lineage4.3.2.1 | 3 |
| lineage3.1.1 | 2 |
| lineage4.8 | 15 |
| lineage4.4.1.1 | 3 |
| lineage1.1.2 | 6 |
| lineage5.2 | 2 |
| lineage2.2.1.1 | 6 |
| lineage4.2.1.1 | 1 |
| lineage4.1 | 3 |
| lineage4.1.1.3 | 2 |
| La2 | 1 |
| lineage4.1.2 | 3 |
| lineage4.3.3 | 8 |
| lineage4.8.1 | 1 |
| lineage3 | 12 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 5 |
| La1.8.1 | 4 |
| lineage6.1.1 | 2 |
| lineage4.1.3 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage5.1.2 | 1 |
| lineage4.9;La1.3 | 3 |
| La1.3 | 3 |
| lineage2 | 4 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.5 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6.5 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1 | 3 |
| lineage4.6.2.2 | 3 |
| lineage6.3.1 | 1 |
| lineage6 | 2 |
| lineage6.1.3 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.7 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1 | 3 |
| lineage4.3.4.1 | 1 |
| La1.4 | 1 |
| lineage1.1.1 | 2 |
| lineage2.1 | 3 |
| lineage2.2.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 2 |
| lineage4;lineage2 | 1 |
| lineage4.1;lineage1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.9;lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 674 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341469 | Other | lineage4 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4821578 | Other | lineage4.1.2.1 | None | ERR2693254 | Other | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4822101 | Sensitive | lineage4.1.3;lineage1.1.2 | None | ERR2693257 | Other | None | ERR4821158 | Sensitive | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR2693227 | Other | lineage4.9 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045555 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045233 | HR-TB | None | SRR6045053 | Other | None | SRR6046210 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046397 | Other | None | SRR6046299 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046497 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046492 | Other | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046824 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6511621 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831638 | Sensitive | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6982196 | Sensitive | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6789626 | Other | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | ERR502943 | HR-TB | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR8217918 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | SRR7496517 | Other | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535086 | Other | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR323039 | HR-TB | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR017781 | Other | lineage3 | None | ERR323041 | HR-TB | None | ERR323053 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323043 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR067699 | HR-TB | lineage4 | None | ERR019855 | Other | lineage3 | None | ERR067681 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1035163 | Sensitive | lineage4.3.3 | sa | ERR1035157 | Other | lineage4.9 | None | ERR1035122 | Sensitive | None | ERR1035158 | Sensitive | lineage4.3.3 | sa | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR1213932 | Sensitive | lineage4.1.2.1 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283027 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR349296 | Sensitive | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR373947 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797069 | Other | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797064 | Sensitive | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769408 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769516 | Other | La1.3 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4769552 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4797313 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4797474 | Other | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798099 | Other | None | ERR4798406 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4811105 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811022 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4810741 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR6358979 | Other | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359045 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | Sensitive | None | ERR736872 | Sensitive | lineage4 | None | ERR702406 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9117709 | HR-TB | None | ERR9786440 | Other | lineage4.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119669 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787165 | Other | lineage6 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9787197 | Other | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1169194 | Other | None | ERR11050385 | Sensitive | lineage4.3.3 | None | SRR1172310 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172717 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173118 | Other | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173484 | Other | lineage4 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1173788 | Other | None | SRR1173778 | Other | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13837614 | Sensitive | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13837580 | HR-TB | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861168 | RR-TB | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861288 | Other | lineage4.9 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861324 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861636 | Sensitive | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861575 | Other | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR15368973 | Other | None | SRR14801749 | Sensitive | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR17658565 | Other | lineage3 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303884 | HR-TB | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR8692905 | HR-TB | None | SRR8692893 | Other | lineage4.9 | None | SRR8692907 | Other | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692871 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675465 | HR-TB | None | ERR4815604 | HR-TB | None | ERR4815797 | HR-TB | lineage1.1.2 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675477 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR158583 | HR-TB | None | ERR4815310 | Other | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675221 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675229 | Other | lineage4 | None | SRR3675236 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675234 | Other | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4815489 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675265 | Other | lineage4 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR4815515 | Sensitive | lineage4.1.3;lineage1.1.2 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR3675279 | Other | None | ERR3275201 | Sensitive | lineage4.8 | nl | ERR4815550 | Other | lineage4 | None | SRR3675311 | Other | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815556 | RR-TB | lineage3 | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | ERR176740 | HR-TB | None | SRR3675387 | Sensitive | None | ERR4816982 | Other | lineage4 | None | SRR3675502 | Other | None | ERR2228965 | Other | lineage4.8 | None | ERR2229542 | Other | lineage4.8 | None | ERR4815752 | Other | lineage4.9 | None | SRR3675503 | Sensitive | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675510 | Other | None | ERR4816151 | Other | lineage4.8 | None | SRR3675522 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR3675542 | Other | lineage4.9 | None | ERR4816999 | Other | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675574 | HR-TB | None | ERR2229084 | Sensitive | lineage4.8 | dk | SRR3675553 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | ERR4817060 | RR-TB | None | SRR3675572 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4817114 | Sensitive | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816656 | HR-TB | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817735 | Other | lineage4.8 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818086 | Sensitive | lineage4.8 | None | ERR234659 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR245716 | Sensitive | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818615 | Other | None | ERR4818394 | Other | lineage4.9 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818929 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | ERR2446570 | Sensitive | lineage4.8 | nl | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007188 | Other | lineage4 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341396 | Other | lineage4 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341418 | Other | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341302 | HR-TB | None | ERR2514692 | Other | None | SRR5341303 | RR-TB | lineage4 | None | ERR2446382 | Other | lineage4 | None | ERR2514821 | Other | lineage2.2.1 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR4819932 | Other | lineage4.7 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341333 | HR-TB | None | SRR5341319 | Other | lineage3 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR5341456 | Other | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None |
|---|
