ERR9786444
|
Sensitive
|
lineage4.8
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
SRR1174897
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
SRR6046066
|
Other
|
lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
SRR6046521
|
Other
|
lineage4.4.1.1
|
None
|
ERR4816999
|
Other
|
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR9786617
|
Other
|
lineage4.1.1.1
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR5341470
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6785268
|
Sensitive
|
lineage4.2.1
|
None
|
ERR323053
|
MDR-TB
|
La2;lineage4.9;lineage9
|
None
|
ERR990545
|
Other
|
lineage3
|
None
|
ERR11081258
|
Other
|
lineage4.8
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
SRR7535086
|
Other
|
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
SRR1181091
|
Other
|
lineage2.2.1.1
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR1180172
|
Other
|
lineage2.2.1
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR12015083
|
Other
|
La3;lineage4.8
|
None
|
SRR26937107
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR12708389
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1183111
|
HR-TB
|
lineage4.9
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
ERR6358991
|
HR-TB
|
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR6046485
|
Other
|
lineage4.9
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
ERR11252558
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
SRR28044634
|
Other
|
lineage3
|
None
|
ERR2514692
|
Other
|
|
None
|
SRR25827682
|
Other
|
|
None
|
ERR212033
|
Other
|
lineage4.9
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR6045555
|
Other
|
lineage4.9
|
None
|
ERR9786440
|
Other
|
lineage4.1
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR3675457
|
Other
|
lineage4.9
|
None
|
SRR3675510
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4818615
|
Sensitive
|
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR21732980
|
Other
|
lineage4.3.3
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
SRR29050928
|
Other
|
lineage4.9
|
None
|
SRR29096541
|
Other
|
lineage4.9
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
ERR11252599
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9787014
|
Other
|
lineage6.1.1
|
None
|
ERR2026698
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
ERR11252736
|
Other
|
lineage4.9
|
None
|
SRR6785267
|
Other
|
lineage2.2.1
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1175074
|
Other
|
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR550636
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
ERR245758
|
Other
|
lineage4.9.1
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
SRR1169194
|
Other
|
lineage4.9
|
None
|
SRR7496517
|
Other
|
|
None
|
ERR9896144
|
Other
|
lineage3
|
None
|
ERR2026697
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1173218
|
Other
|
lineage4.3.3
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
ERR2513470
|
Other
|
lineage4.2.2.2
|
None
|
SRR29051077
|
Other
|
lineage4.9
|
None
|
SRR6045219
|
HR-TB
|
lineage4.9
|
None
|
ERR11489020
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29016901
|
Other
|
La3;lineage4.9
|
None
|
ERR4798648
|
MDR-TB
|
lineage3.1.2.2
|
None
|
ERR4798504
|
RR-TB
|
lineage3
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4815441
|
HR-TB
|
lineage4.9
|
None
|
SRR6785263
|
Sensitive
|
lineage2.2.1
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR11465025
|
Other
|
lineage4.1.1.3
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR7496509
|
Other
|
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR9786656
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
ERR9786843
|
Other
|
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
ERR987722
|
MDR-TB
|
|
None
|
SRR1172857
|
Other
|
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
SRR21690574
|
Other
|
lineage4.1.2.1
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR1180226
|
HR-TB
|
lineage4.9
|
None
|
ERR2514821
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1167384
|
Other
|
La3;lineage4.9
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR502524
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR29051093
|
Other
|
lineage4.9
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR4828872
|
Sensitive
|
lineage4.2;lineage4.9
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
ERR9787061
|
Sensitive
|
lineage6.2.3
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SRR1172310
|
HR-TB
|
lineage4.9
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR4817893
|
Other
|
La3;lineage4.8
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1183049
|
RR-TB
|
lineage2.2
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2026695
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
|
None
|
SRR1173355
|
Other
|
lineage4.9
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR15368973
|
Other
|
lineage4.9
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
ERR4815604
|
Other
|
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
SAMEA2533358
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
SRR1196474
|
Other
|
lineage3.1.1
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
SRR3675236
|
Other
|
|
None
|
ERR7821123
|
Other
|
lineage1.1.3.2
|
None
|
ERR212121
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR9117805
|
Other
|
lineage4.3.2
|
None
|
ERR3283044
|
Other
|
lineage4
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
SRR25827605
|
Pre-XDR-TB
|
lineage2.2.1;lineage3;lineage4
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
SRR6046594
|
Sensitive
|
lineage4.9
|
None
|
ERR7821193
|
Other
|
lineage2.2.1
|
None
|
ERR9117709
|
Other
|
|
None
|
ERR2026696
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR3675549
|
Other
|
lineage4.9
|
None
|
ERR11466499
|
Other
|
lineage4.3.4.1
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
SRR26937071
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
ERR502532
|
Other
|
M.canetti;lineage2.1;lineage6.3
|
None
|
SRR29050859
|
Other
|
lineage4.9
|
None
|
ERR3799304
|
Other
|
lineage6.1.1
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
ERR502912
|
Other
|
lineage2.2.1
|
None
|
SRR6046026
|
RR-TB
|
lineage4.2;lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
ERR212001
|
HR-TB
|
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
ERR4817060
|
Other
|
|
None
|
ERR234659
|
Other
|
|
None
|
SRR1173166
|
Sensitive
|
lineage4.9
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
ERR736865
|
HR-TB
|
lineage4.3.2;lineage4.9
|
None
|
SRR1181289
|
Other
|
lineage2.2.1
|
None
|
SRR12006550
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1196566
|
Other
|
lineage4.9
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR23961558
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
ERR4819241
|
Other
|
lineage4.9
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR29016780
|
Other
|
lineage4.9
|
None
|
ERR2514327
|
HR-TB
|
lineage4.8
|
None
|
ERR987729
|
HR-TB
|
lineage3.1.2.1;lineage3.1.2.2
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
SRR3675214
|
Other
|
lineage4.9
|
None
|
SRR25827687
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
ERR323039
|
HR-TB
|
La2;lineage4.9
|
None
|
ERR13267017
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1196677
|
Other
|
lineage2.2
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
SRR17658565
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR13245558
|
MDR-TB
|
La3;lineage2.2.2
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6785262
|
Sensitive
|
lineage4.2.1
|
None
|