TB-Profiler result

Run: SRR1173166
Summary

Run ID: SRR1173166

Sample name:

Date: 03-04-2023 03:18:03

Number of reads: 124638

Percentage reads mapped: 43.74

Strain: lineage4.9

Drug-resistance: Other

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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4.9 Euro-American (H37Rv-like) T1 None 0.93
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
rrs 1472307 n.462C>T non_coding_transcript_exon_variant 0.57 streptomycin
pncA 2289038 p.Trp68Cys missense_variant 1.0 pyrazinamide
embB 4247431 p.Met306Ile missense_variant 0.67 ethambutol
embB 4247448 p.His312Arg missense_variant 0.4 ethambutol
embB 4247708 p.Asn399Asp missense_variant 0.67 ethambutol
gid 4408095 c.107delT frameshift_variant 1.0 streptomycin
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 5812 c.573C>G synonymous_variant 0.4
gyrB 5824 c.585A>G synonymous_variant 0.4
gyrB 5827 c.588G>A synonymous_variant 0.4
gyrB 5849 c.610C>T synonymous_variant 0.5
gyrB 5863 c.624G>C synonymous_variant 0.4
gyrB 5873 c.634A>C synonymous_variant 0.67
gyrB 6115 c.876A>G synonymous_variant 0.5
gyrB 6123 p.Ala295Gly missense_variant 0.67
gyrB 6127 c.888G>C synonymous_variant 0.67
gyrB 6130 c.891T>C synonymous_variant 0.67
gyrB 6136 c.897G>A synonymous_variant 0.67
gyrB 6139 c.900G>C synonymous_variant 0.67
gyrB 6196 c.957C>T synonymous_variant 0.6
gyrA 6307 c.-995T>G upstream_gene_variant 1.0
gyrA 6319 c.-983G>C upstream_gene_variant 1.0
gyrA 6346 c.-956C>T upstream_gene_variant 1.0
gyrA 6362 c.-940T>C upstream_gene_variant 1.0
gyrA 6376 c.-926G>A upstream_gene_variant 1.0
gyrA 6379 c.-923C>G upstream_gene_variant 1.0
gyrA 6382 c.-920A>G upstream_gene_variant 1.0
gyrA 6388 c.-914T>C upstream_gene_variant 1.0
gyrA 6634 c.-668T>C upstream_gene_variant 0.5
gyrA 6637 c.-665T>G upstream_gene_variant 0.5
gyrA 6640 c.-662A>G upstream_gene_variant 0.5
gyrA 6643 c.-659A>G upstream_gene_variant 0.5
gyrA 6649 c.-653T>C upstream_gene_variant 0.5
gyrA 6655 c.-647T>C upstream_gene_variant 0.4
gyrA 6670 c.-632G>C upstream_gene_variant 0.4
gyrA 6673 c.-629A>C upstream_gene_variant 0.4
gyrA 6676 c.-626T>G upstream_gene_variant 0.4
gyrA 6700 c.-602T>C upstream_gene_variant 0.5
gyrA 6703 c.-599G>C upstream_gene_variant 0.5
gyrA 6709 c.-593A>G upstream_gene_variant 0.5
gyrA 6712 c.-590G>C upstream_gene_variant 0.5
gyrA 6793 c.-509T>C upstream_gene_variant 0.67
gyrB 6797 p.Gly520Thr missense_variant 0.67
gyrA 6811 c.-491C>T upstream_gene_variant 1.0
gyrA 6841 c.-461T>C upstream_gene_variant 1.0
gyrA 6844 c.-458T>C upstream_gene_variant 1.0
gyrA 6853 c.-449A>G upstream_gene_variant 1.0
gyrA 6856 c.-446T>C upstream_gene_variant 1.0
gyrA 6859 c.-443T>C upstream_gene_variant 1.0
gyrA 6862 c.-440C>G upstream_gene_variant 1.0
gyrA 6868 c.-434G>C upstream_gene_variant 1.0
gyrA 6949 c.-353A>G upstream_gene_variant 1.0
gyrA 6952 c.-350C>G upstream_gene_variant 1.0
gyrA 6967 c.-335T>C upstream_gene_variant 1.0
gyrA 6973 c.-329G>C upstream_gene_variant 1.0
gyrA 6982 c.-320A>C upstream_gene_variant 1.0
gyrA 7006 c.-296T>C upstream_gene_variant 0.67
gyrA 7007 c.-295C>T upstream_gene_variant 0.67
gyrA 7010 c.-292C>T upstream_gene_variant 0.67
gyrA 7015 c.-287G>A upstream_gene_variant 0.67
gyrA 7018 c.-284G>A upstream_gene_variant 0.67
gyrB 7023 p.Leu595Gln missense_variant 0.67
gyrA 7033 c.-269G>C upstream_gene_variant 0.6
gyrB 7051 p.Glu604Asp missense_variant 0.6
gyrA 7362 p.Glu21Gln missense_variant 1.0
gyrA 8965 p.Val555Asp missense_variant 0.29
gyrA 9062 c.1761C>G synonymous_variant 0.4
gyrA 9068 c.1767G>C synonymous_variant 0.4
gyrA 9071 c.1770G>C synonymous_variant 0.4
gyrA 9080 c.1779G>T synonymous_variant 0.4
gyrA 9089 c.1788G>C synonymous_variant 0.4
gyrA 9119 c.1818A>G synonymous_variant 0.6
gyrA 9122 c.1821C>G synonymous_variant 0.6
gyrA 9143 c.1842T>C synonymous_variant 0.8
gyrA 9152 c.1851C>T synonymous_variant 0.75
gyrA 9153 p.Thr618Glu missense_variant 0.75
gyrA 9158 c.1857C>T synonymous_variant 0.75
gyrA 9161 c.1860C>G synonymous_variant 0.8
gyrA 9182 c.1881T>C synonymous_variant 0.83
gyrA 9191 c.1890G>C synonymous_variant 0.83
gyrA 9200 c.1899A>G synonymous_variant 0.83
gyrA 9204 p.Ser635Thr missense_variant 0.8
gyrA 9224 c.1923C>T synonymous_variant 1.0
gyrA 9230 c.1929T>C synonymous_variant 1.0
gyrA 9233 c.1932C>G synonymous_variant 1.0
gyrA 9239 c.1938C>T synonymous_variant 1.0
gyrA 9252 p.Val651Ile missense_variant 1.0
gyrA 9284 c.1983T>C synonymous_variant 0.67
gyrA 9291 c.1990C>T synonymous_variant 0.67
gyrA 9296 c.1995T>C synonymous_variant 0.67
gyrA 9299 c.1998G>C synonymous_variant 0.67
gyrA 9300 p.Ala667Ser missense_variant 0.67
gyrA 9304 p.Gly668Asp missense_variant 1.0
gyrA 9308 p.Asp669Glu missense_variant 0.67
gyrA 9323 c.2022C>G synonymous_variant 0.6
gyrA 9335 c.2034G>C synonymous_variant 0.6
gyrA 9602 c.2301T>C synonymous_variant 0.5
gyrA 9611 p.Asp770Glu missense_variant 0.6
gyrA 9626 c.2325T>C synonymous_variant 0.5
gyrA 9629 c.2328C>G synonymous_variant 0.5
gyrA 9630 p.Val777Ile missense_variant 0.5
gyrA 9635 c.2334T>C synonymous_variant 0.5
gyrA 9638 c.2337C>G synonymous_variant 0.5
gyrA 9641 c.2340C>A synonymous_variant 0.5
gyrA 9644 c.2343T>C synonymous_variant 0.5
gyrA 9650 c.2349G>C synonymous_variant 0.5
gyrA 9656 c.2355C>G synonymous_variant 0.5
gyrA 9665 c.2364A>C synonymous_variant 0.67
gyrA 9666 p.Arg789Gly missense_variant 0.67
gyrA 9674 c.2373T>C synonymous_variant 0.67
fgd1 491181 c.399T>C synonymous_variant 0.5
fgd1 491184 c.402A>G synonymous_variant 0.5
fgd1 491191 p.Gly137Arg missense_variant 0.4
fgd1 491194 c.412_414delCTAinsTTG synonymous_variant 0.4
fgd1 491742 c.960T>C synonymous_variant 1.0
mshA 575536 c.189T>C synonymous_variant 0.5
mshA 575542 c.195C>A synonymous_variant 0.4
mshA 575561 p.Met72Val missense_variant 0.33
mshA 575569 c.222A>G synonymous_variant 0.33
mshA 575571 p.Ser75Thr missense_variant 0.33
mshA 575576 c.229C>T synonymous_variant 0.4
mshA 575581 c.234C>T synonymous_variant 0.4
mshA 575587 c.240C>G synonymous_variant 0.4
mshA 575590 c.243T>C synonymous_variant 0.4
mshA 575665 c.318G>A synonymous_variant 0.67
mshA 575674 c.327G>C synonymous_variant 0.6
mshA 575695 c.348C>G synonymous_variant 0.5
mshA 575701 c.354G>A synonymous_variant 0.5
mshA 575704 c.357T>G synonymous_variant 0.5
mshA 575705 c.358T>C synonymous_variant 0.6
mshA 575713 c.366G>A synonymous_variant 0.6
mshA 575719 c.372C>T synonymous_variant 0.6
mshA 575734 c.387T>G synonymous_variant 0.6
mshA 575737 c.390T>C synonymous_variant 0.6
mshA 575746 c.399C>G synonymous_variant 0.5
mshA 575944 c.597T>C synonymous_variant 0.4
mshA 575950 c.603C>G synonymous_variant 0.4
ccsA 620226 c.336G>A synonymous_variant 0.4
ccsA 620245 c.355T>C synonymous_variant 0.4
ccsA 620249 p.Ser120Cys missense_variant 0.5
ccsA 620254 c.364_366delCTCinsTTG synonymous_variant 0.5
ccsA 620265 c.375C>G synonymous_variant 1.0
ccsA 620412 c.522T>C synonymous_variant 0.75
ccsA 620415 c.525T>C synonymous_variant 0.75
ccsA 620421 c.531G>C synonymous_variant 0.75
ccsA 620424 c.534G>C synonymous_variant 0.75
ccsA 620433 c.543C>G synonymous_variant 1.0
ccsA 620436 c.546T>A synonymous_variant 1.0
ccsA 620439 c.549T>C synonymous_variant 1.0
ccsA 620445 c.555A>G synonymous_variant 1.0
ccsA 620460 c.570T>G synonymous_variant 1.0
ccsA 620461 p.Val191Ile missense_variant 1.0
ccsA 620481 c.591T>G synonymous_variant 1.0
ccsA 620482 p.Val198Leu missense_variant 1.0
ccsA 620490 c.600A>C synonymous_variant 1.0
rpoB 759622 c.-185C>A upstream_gene_variant 0.4
rpoB 760091 c.285G>C synonymous_variant 1.0
rpoB 760101 c.295T>C synonymous_variant 1.0
rpoB 760112 c.306T>C synonymous_variant 1.0
rpoB 760118 c.312T>G synonymous_variant 1.0
rpoB 760121 c.315T>C synonymous_variant 1.0
rpoB 760130 p.Asp108Glu missense_variant 0.8
rpoB 760139 c.333A>G synonymous_variant 0.8
rpoB 760142 c.336C>G synonymous_variant 0.8
rpoB 760181 c.375T>C synonymous_variant 0.6
rpoB 760184 c.378A>G synonymous_variant 0.67
rpoB 760196 c.390C>G synonymous_variant 0.5
rpoB 760223 c.417T>C synonymous_variant 0.5
rpoB 760235 c.429T>C synonymous_variant 0.44
rpoB 760283 c.477G>C synonymous_variant 0.5
rpoB 760298 c.492G>C synonymous_variant 0.67
rpoB 760307 c.501T>C synonymous_variant 0.5
rpoB 760310 c.504G>C synonymous_variant 0.6
rpoB 760328 c.522G>C synonymous_variant 0.75
rpoB 760331 c.525G>C synonymous_variant 0.75
rpoB 760340 c.534G>T synonymous_variant 0.69
rpoB 760361 c.555T>C synonymous_variant 0.69
rpoB 760370 c.564C>G synonymous_variant 0.67
rpoB 760376 p.Asp190Glu missense_variant 0.64
rpoB 760380 p.Thr192Leu missense_variant 0.6
rpoB 760406 c.600G>C synonymous_variant 0.6
rpoB 760412 c.606C>G synonymous_variant 0.67
rpoB 760484 c.678A>G synonymous_variant 0.67
rpoB 760991 c.1185G>C synonymous_variant 0.75
rpoB 761006 c.1200C>G synonymous_variant 0.8
rpoB 761015 c.1209G>C synonymous_variant 0.8
rpoB 761021 c.1215G>C synonymous_variant 0.8
rpoB 761027 c.1221A>G synonymous_variant 0.8
rpoB 761036 c.1230G>C synonymous_variant 0.8
rpoB 761037 c.1231T>C synonymous_variant 0.8
rpoB 761057 c.1251G>C synonymous_variant 1.0
rpoB 761207 c.1401C>T synonymous_variant 1.0
rpoB 761213 c.1407G>C synonymous_variant 1.0
rpoB 761219 c.1413G>C synonymous_variant 1.0
rpoB 761249 c.1443A>G synonymous_variant 1.0
rpoB 761255 c.1449T>G synonymous_variant 1.0
rpoB 761261 c.1455G>T synonymous_variant 1.0
rpoB 761306 c.1500C>G synonymous_variant 1.0
rpoB 761327 c.1521A>G synonymous_variant 1.0
rpoB 761330 c.1524G>C synonymous_variant 1.0
rpoB 761354 c.1548C>T synonymous_variant 0.75
rpoB 761360 c.1554T>C synonymous_variant 0.75
rpoB 761362 p.Ser519Thr missense_variant 0.75
rpoB 761373 p.Val523His missense_variant 0.75
rpoB 761885 c.2079T>C synonymous_variant 0.67
rpoB 761906 c.2100C>G synonymous_variant 0.5
rpoB 761909 c.2103T>C synonymous_variant 0.5
rpoB 761912 c.2106T>C synonymous_variant 0.5
rpoB 761915 p.Asp703Glu missense_variant 0.5
rpoB 761916 p.Asp704Asn missense_variant 0.5
rpoB 761948 c.2142G>C synonymous_variant 0.86
rpoB 761954 c.2148C>G synonymous_variant 1.0
rpoB 762008 c.2202C>T synonymous_variant 0.88
rpoB 762014 c.2208C>T synonymous_variant 0.88
rpoB 762017 c.2211A>G synonymous_variant 0.88
rpoB 762053 c.2247T>C synonymous_variant 0.71
rpoB 762062 c.2256T>C synonymous_variant 0.75
rpoB 762065 c.2259T>C synonymous_variant 0.75
rpoB 762083 c.2277T>C synonymous_variant 0.75
rpoB 762086 c.2280G>C synonymous_variant 0.86
rpoB 762101 c.2295C>G synonymous_variant 0.67
rpoB 762114 p.Ile770Val missense_variant 0.5
rpoB 762131 c.2325C>G synonymous_variant 0.5
rpoB 762140 c.2334G>C synonymous_variant 0.4
rpoB 762143 c.2337T>C synonymous_variant 0.4
rpoB 762149 c.2343G>C synonymous_variant 0.4
rpoB 762176 c.2370T>C synonymous_variant 0.5
rpoB 762185 c.2379G>C synonymous_variant 0.5
rpoB 762206 c.2400C>G synonymous_variant 0.67
rpoB 762233 c.2427G>C synonymous_variant 0.5
rpoB 762246 c.2440C>T synonymous_variant 0.4
rpoB 762257 c.2451C>G synonymous_variant 0.4
rpoB 762266 c.2460T>C synonymous_variant 0.33
rpoB 762284 c.2478G>C synonymous_variant 0.43
rpoB 762293 c.2487T>C synonymous_variant 0.5
rpoB 762314 c.2508C>T synonymous_variant 0.43
rpoB 762317 c.2511A>G synonymous_variant 0.5
rpoB 762329 c.2523G>C synonymous_variant 0.5
rpoB 762338 c.2532T>C synonymous_variant 0.71
rpoB 762347 c.2541T>C synonymous_variant 0.71
rpoB 762362 p.Glu852Asp missense_variant 0.8
rpoB 762369 c.2563T>C synonymous_variant 0.8
rpoC 762395 c.-975G>C upstream_gene_variant 0.6
rpoC 762398 c.-972T>C upstream_gene_variant 0.5
rpoC 762401 c.-969G>C upstream_gene_variant 0.67
rpoC 762404 c.-966T>C upstream_gene_variant 0.5
rpoC 762410 c.-960T>G upstream_gene_variant 0.5
rpoC 762413 c.-957G>A upstream_gene_variant 0.5
rpoC 762416 c.-954A>G upstream_gene_variant 0.5
rpoC 762419 c.-951C>G upstream_gene_variant 0.5
rpoC 762434 c.-936T>C upstream_gene_variant 1.0
rpoC 762782 c.-588T>C upstream_gene_variant 1.0
rpoB 762785 p.Asp993Glu missense_variant 1.0
rpoC 762788 c.-582G>C upstream_gene_variant 0.67
rpoB 762789 p.Leu995Met missense_variant 0.67
rpoC 762794 c.-576C>G upstream_gene_variant 0.67
rpoB 762799 p.Ala998Gly missense_variant 0.67
rpoB 762810 p.Ala1002Ser missense_variant 0.67
rpoB 762813 p.Met1003Val missense_variant 0.67
rpoC 762818 c.-552C>G upstream_gene_variant 0.67
rpoC 762827 c.-543G>C upstream_gene_variant 0.6
rpoC 762857 c.-513C>G upstream_gene_variant 0.67
rpoC 762860 c.-510G>C upstream_gene_variant 0.67
rpoC 762863 c.-507T>C upstream_gene_variant 0.67
rpoC 762929 c.-441G>C upstream_gene_variant 0.5
rpoC 763013 c.-357C>G upstream_gene_variant 0.67
rpoC 763028 c.-342T>C upstream_gene_variant 0.5
rpoC 763031 c.-339T>C upstream_gene_variant 1.0
rpoC 763034 c.-336C>G upstream_gene_variant 0.5
rpoC 763040 c.-330C>G upstream_gene_variant 0.5
rpoC 763067 c.-303C>G upstream_gene_variant 0.8
rpoC 763070 c.-300T>C upstream_gene_variant 0.8
rpoC 763085 c.-285C>G upstream_gene_variant 0.83
rpoC 763115 c.-255T>C upstream_gene_variant 0.8
rpoC 763136 c.-234C>T upstream_gene_variant 0.5
rpoC 763148 c.-222G>C upstream_gene_variant 0.33
rpoC 763158 c.-212C>T upstream_gene_variant 0.33
rpoC 763166 c.-204A>G upstream_gene_variant 0.33
rpoC 763402 c.33C>G synonymous_variant 0.22
rpoC 763411 c.42T>G synonymous_variant 0.25
rpoC 763414 c.45T>C synonymous_variant 0.25
rpoC 763441 c.72C>T synonymous_variant 0.33
rpoC 763444 c.75T>C synonymous_variant 0.33
rpoC 763486 c.117T>G synonymous_variant 1.0
rpoC 763492 c.123G>C synonymous_variant 1.0
rpoC 763528 c.159G>A synonymous_variant 1.0
rpoC 763546 c.177A>G synonymous_variant 1.0
rpoC 763573 c.204G>C synonymous_variant 0.67
rpoC 763594 c.225C>T synonymous_variant 0.6
rpoC 763603 c.234C>T synonymous_variant 0.6
rpoC 763606 c.237C>T synonymous_variant 0.6
rpoC 763636 c.267T>C synonymous_variant 0.67
rpoC 763657 c.288G>A synonymous_variant 0.64
rpoC 763660 c.291T>G synonymous_variant 0.64
rpoC 763675 c.306C>G synonymous_variant 0.7
rpoC 763696 c.327T>C synonymous_variant 0.67
rpoC 763702 c.333C>G synonymous_variant 0.6
rpoC 763717 c.348T>C synonymous_variant 0.4
rpoC 763723 c.354G>C synonymous_variant 0.46
rpoC 763732 c.363C>G synonymous_variant 0.4
rpoC 763741 c.372C>T synonymous_variant 0.33
rpoC 763744 c.375G>C synonymous_variant 0.4
rpoC 763765 c.396T>C synonymous_variant 0.45
rpoC 763774 c.405G>C synonymous_variant 0.45
rpoC 763807 c.438T>C synonymous_variant 0.62
rpoC 763816 c.447C>G synonymous_variant 0.62
rpoC 763835 p.Ala156Met missense_variant 0.8
rpoC 763853 p.Val162Ile missense_variant 0.75
rpoC 763858 c.489A>G synonymous_variant 0.75
rpoC 763872 p.Gly168Ala missense_variant 0.67
rpoC 763876 p.Glu169Asp missense_variant 0.67
rpoC 763879 c.510A>G synonymous_variant 0.67
rpoC 763888 c.519G>C synonymous_variant 0.67
rpoC 763891 c.522G>C synonymous_variant 0.67
rpoC 763894 c.525A>G synonymous_variant 0.67
rpoC 763900 c.531G>C synonymous_variant 0.67
rpoC 763915 c.546C>T synonymous_variant 1.0
rpoC 764236 c.867G>A synonymous_variant 0.67
rpoC 764248 c.879C>G synonymous_variant 0.67
rpoC 764257 c.888G>C synonymous_variant 0.6
rpoC 764266 c.897T>C synonymous_variant 0.5
rpoC 764269 c.900G>C synonymous_variant 0.5
rpoC 764272 c.903G>C synonymous_variant 0.5
rpoC 764278 c.909A>G synonymous_variant 0.5
rpoC 764539 c.1170C>G synonymous_variant 1.0
rpoC 764548 c.1179G>A synonymous_variant 1.0
rpoC 764551 c.1182G>C synonymous_variant 1.0
rpoC 764554 c.1185C>T synonymous_variant 1.0
rpoC 764560 c.1191T>C synonymous_variant 1.0
rpoC 764566 c.1197C>G synonymous_variant 1.0
rpoC 764575 c.1206T>G synonymous_variant 0.67
rpoC 764593 c.1224C>T synonymous_variant 0.67
rpoC 764611 c.1242G>T synonymous_variant 0.67
rpoC 764752 c.1383G>C synonymous_variant 0.43
rpoC 764764 c.1395T>C synonymous_variant 0.4
rpoC 764827 c.1458G>C synonymous_variant 0.33
rpoC 764858 c.1489T>C synonymous_variant 0.33
rpoC 764872 c.1503A>G synonymous_variant 0.5
rpoC 764888 c.1519T>C synonymous_variant 0.5
rpoC 764911 c.1542A>G synonymous_variant 0.57
rpoC 764932 c.1563C>A synonymous_variant 0.43
rpoC 764948 c.1579T>C synonymous_variant 0.4
rpoC 765034 c.1665T>C synonymous_variant 0.67
rpoC 765040 c.1671T>C synonymous_variant 0.67
rpoC 765041 c.1672T>C synonymous_variant 0.67
rpoC 765047 c.1678T>C synonymous_variant 0.75
rpoC 765055 c.1686C>G synonymous_variant 0.75
rpoC 765073 c.1704G>C synonymous_variant 0.67
rpoC 765076 c.1707A>G synonymous_variant 0.67
rpoC 765079 c.1710T>G synonymous_variant 0.67
rpoC 765082 c.1713G>C synonymous_variant 1.0
rpoC 765089 c.1720T>C synonymous_variant 1.0
rpoC 765103 c.1734G>T synonymous_variant 1.0
rpoC 765292 c.1923G>C synonymous_variant 0.4
rpoC 765298 c.1929G>C synonymous_variant 0.4
rpoC 765300 p.Val644Ala missense_variant 0.4
rpoC 765529 c.2160C>T synonymous_variant 0.5
rpoC 765541 c.2172C>G synonymous_variant 0.6
rpoC 765553 c.2184C>T synonymous_variant 1.0
rpoC 765556 c.2187G>C synonymous_variant 1.0
rpoC 765559 c.2190G>C synonymous_variant 1.0
rpoC 765580 c.2211G>C synonymous_variant 0.75
rpoC 765613 p.His748Gln missense_variant 0.5
rpoC 765734 c.2365T>C synonymous_variant 0.5
rpoC 765739 c.2370G>T synonymous_variant 0.5
rpoC 765814 c.2445A>G synonymous_variant 0.67
rpoC 765826 c.2457T>C synonymous_variant 0.67
rpoC 765835 c.2466C>T synonymous_variant 0.67
rpoC 765850 c.2481G>C synonymous_variant 1.0
rpoC 765883 c.2514C>G synonymous_variant 0.5
rpoC 765886 c.2517C>G synonymous_variant 0.5
rpoC 765892 c.2523T>C synonymous_variant 0.5
rpoC 765937 c.2568T>C synonymous_variant 0.5
rpoC 765967 c.2598C>T synonymous_variant 0.6
rpoC 765982 c.2613C>G synonymous_variant 0.6
rpoC 765994 c.2625A>T synonymous_variant 0.67
rpoC 766010 c.2641_2642delTCinsAG synonymous_variant 0.5
rpoC 766021 c.2652G>C synonymous_variant 0.6
rpoC 766027 c.2658G>C synonymous_variant 0.6
rpoC 766043 p.Gln892Glu missense_variant 0.5
rpoC 766054 c.2685C>G synonymous_variant 0.43
rpoC 766082 p.Ala905Gln missense_variant 0.43
rpoC 766096 c.2727G>C synonymous_variant 0.44
rpoC 766129 c.2760C>G synonymous_variant 0.5
rpoC 766381 c.3012C>T synonymous_variant 0.67
rpoC 766384 c.3015A>G synonymous_variant 0.67
rpoC 766390 c.3021C>T synonymous_variant 0.67
rpoC 766393 c.3024C>G synonymous_variant 0.67
rpoC 766408 c.3039C>G synonymous_variant 0.4
rpoC 766411 c.3042C>G synonymous_variant 0.33
rpoC 766426 c.3057C>T synonymous_variant 0.67
rpoC 766447 c.3078T>C synonymous_variant 0.71
rpoC 766462 c.3093G>C synonymous_variant 0.6
rpoC 766483 c.3114G>C synonymous_variant 0.5
rpoC 766484 p.Val1039Ile missense_variant 0.5
rpoC 766492 c.3123T>C synonymous_variant 0.5
rpoC 766549 c.3180G>C synonymous_variant 0.5
rpoC 766573 c.3204T>C synonymous_variant 0.75
rpoC 766582 c.3213C>G synonymous_variant 0.6
rpoC 766583 p.Gly1072Ser missense_variant 0.6
rpoC 766591 c.3222A>G synonymous_variant 0.5
rpoC 766594 c.3225G>C synonymous_variant 0.5
rpoC 766597 c.3228C>G synonymous_variant 0.5
rpoC 766607 p.Ile1080Leu missense_variant 0.5
rpoC 766630 c.3261G>C synonymous_variant 0.67
rpoC 766657 c.3288A>G synonymous_variant 0.75
rpoC 766672 c.3303T>C synonymous_variant 0.8
rpoC 766673 p.Gly1102Asn missense_variant 0.8
rpoC 766726 c.3357T>C synonymous_variant 1.0
rpoC 766738 c.3369G>C synonymous_variant 1.0
rpoC 766765 c.3396A>C synonymous_variant 1.0
rpoC 766774 c.3405T>C synonymous_variant 1.0
rpoC 766795 c.3426C>T synonymous_variant 1.0
rpoC 766801 c.3432C>G synonymous_variant 1.0
rpoC 766804 c.3435A>G synonymous_variant 1.0
rpoC 766900 c.3531T>C synonymous_variant 0.67
rpoC 766933 c.3564A>G synonymous_variant 1.0
rpoC 766945 c.3576A>G synonymous_variant 1.0
rpoC 766963 c.3594T>C synonymous_variant 1.0
rpoC 766972 c.3603G>C synonymous_variant 1.0
rpoC 766996 c.3627C>T synonymous_variant 1.0
rpoC 767009 p.Ser1214Thr missense_variant 1.0
rpoC 767059 c.3690T>G synonymous_variant 1.0
rpoC 767062 c.3693C>A synonymous_variant 1.0
rpoC 767098 c.3729T>C synonymous_variant 0.67
rpoC 767119 c.3750A>G synonymous_variant 0.67
mmpL5 777170 c.1311T>C synonymous_variant 0.67
mmpL5 777176 p.Glu435Asp missense_variant 0.67
mmpL5 777191 c.1290C>G synonymous_variant 0.67
mmpL5 777194 c.1287A>G synonymous_variant 0.67
mmpL5 777206 c.1275A>G synonymous_variant 0.5
mmpL5 777212 p.Ala423Thr missense_variant 0.5
mmpL5 777215 c.1266C>G synonymous_variant 0.5
mmpL5 777218 c.1263G>A synonymous_variant 0.5
mmpL5 777584 c.897C>T synonymous_variant 1.0
rpsL 781595 c.36T>C synonymous_variant 1.0
rpsL 781605 p.Ile16Val missense_variant 1.0
rpsL 781608 p.Ser17Ala missense_variant 1.0
rpsL 781628 c.69T>C synonymous_variant 0.67
rpsL 781631 c.72G>C synonymous_variant 0.67
rpsL 781649 c.90T>C synonymous_variant 0.67
rpsL 781655 c.96T>C synonymous_variant 0.67
rpsL 781728 c.169T>C synonymous_variant 0.5
rpsL 781736 c.177T>C synonymous_variant 0.6
rpsL 781742 c.183C>T synonymous_variant 0.6
rpsL 781748 c.189C>G synonymous_variant 0.6
rpsL 781754 c.195G>C synonymous_variant 0.67
rpsL 781760 c.201T>C synonymous_variant 0.67
rpsL 781772 c.213C>A synonymous_variant 0.8
rpsL 781808 c.249C>T synonymous_variant 1.0
rpsL 781811 c.252C>T synonymous_variant 1.0
rpsL 781832 c.273T>C synonymous_variant 1.0
rpsL 781838 c.279G>C synonymous_variant 1.0
rpsL 781841 c.282C>G synonymous_variant 1.0
rpsL 781865 c.306G>C synonymous_variant 1.0
rpsL 781868 c.309T>C synonymous_variant 1.0
rpsL 781871 c.312G>C synonymous_variant 1.0
rpsL 781877 c.318T>C synonymous_variant 1.0
rplC 800648 c.-161A>T upstream_gene_variant 0.5
rplC 800654 c.-155T>C upstream_gene_variant 0.5
rplC 800693 c.-116A>G upstream_gene_variant 0.4
rplC 800771 c.-38C>T upstream_gene_variant 0.5
rplC 800794 c.-15A>G upstream_gene_variant 0.4
rplC 800796 c.-13A>G upstream_gene_variant 0.4
rplC 800798 c.-10_-9delGG upstream_gene_variant 0.4
rplC 800814 c.6A>G synonymous_variant 0.6
rplC 800817 c.9A>T synonymous_variant 0.6
rplC 800844 c.36T>C synonymous_variant 0.6
rplC 800858 p.Phe17Ser missense_variant 0.4
rplC 800865 c.57A>G synonymous_variant 0.4
rplC 800867 p.Ser20Asn missense_variant 0.4
rplC 800874 c.66A>G synonymous_variant 0.4
rplC 800875 p.Val23Ile missense_variant 0.4
rplC 800880 c.72A>G synonymous_variant 0.33
rplC 800889 c.81C>G synonymous_variant 0.43
rplC 800892 c.84G>C synonymous_variant 0.43
rplC 800907 c.99C>G synonymous_variant 0.43
rplC 800916 c.108A>G synonymous_variant 0.43
rplC 800934 c.126C>G synonymous_variant 0.4
rplC 800937 c.129A>G synonymous_variant 0.4
rplC 800939 p.Arg44Gln missense_variant 0.4
rplC 800946 c.138T>C synonymous_variant 0.33
rplC 800949 c.141T>C synonymous_variant 0.33
rplC 800967 c.159C>G synonymous_variant 0.29
rplC 800970 c.162T>C synonymous_variant 0.29
rplC 801147 c.339T>C synonymous_variant 0.4
rplC 801150 c.342G>C synonymous_variant 0.4
rplC 801153 c.345G>C synonymous_variant 0.5
rplC 801156 c.348T>A synonymous_variant 0.5
rplC 801168 c.360C>G synonymous_variant 0.5
rplC 801171 c.363A>G synonymous_variant 0.5
rplC 801174 c.366T>C synonymous_variant 0.5
rplC 801180 c.372C>G synonymous_variant 0.5
rplC 801195 c.387G>C synonymous_variant 0.67
rplC 801207 c.399C>T synonymous_variant 0.75
rplC 801246 c.438C>T synonymous_variant 0.6
rplC 801249 c.441T>C synonymous_variant 0.6
rplC 801255 c.447C>T synonymous_variant 0.6
rplC 801264 c.456C>T synonymous_variant 0.5
rplC 801267 c.459A>T synonymous_variant 0.5
rplC 801270 c.462T>C synonymous_variant 0.5
rplC 801276 c.468G>C synonymous_variant 0.5
rplC 801279 c.471G>C synonymous_variant 0.5
rplC 801282 c.474G>C synonymous_variant 0.5
rplC 801285 c.477G>C synonymous_variant 0.5
rplC 801300 c.492C>G synonymous_variant 0.6
fbiC 1303530 c.600G>A synonymous_variant 0.4
fbiC 1303534 p.Ser202Ala missense_variant 0.5
fbiC 1303539 c.609G>C synonymous_variant 0.5
fbiC 1303545 c.615A>G synonymous_variant 0.5
fbiC 1303575 c.645G>C synonymous_variant 0.5
fbiC 1303590 c.660A>G synonymous_variant 0.33
fbiC 1303602 c.672A>G synonymous_variant 0.33
fbiC 1303605 c.675C>G synonymous_variant 0.4
fbiC 1303608 c.678G>A synonymous_variant 0.4
fbiC 1303614 c.684C>T synonymous_variant 0.4
fbiC 1303617 c.687C>G synonymous_variant 0.4
fbiC 1303728 c.798G>A synonymous_variant 0.29
fbiC 1303731 c.801A>C synonymous_variant 0.33
fbiC 1303732 p.Ser268Ala missense_variant 0.33
fbiC 1303737 c.807G>A synonymous_variant 0.5
fbiC 1303746 c.816T>C synonymous_variant 0.5
fbiC 1303749 c.819G>C synonymous_variant 0.4
fbiC 1303752 c.822A>G synonymous_variant 0.4
fbiC 1303755 c.825T>C synonymous_variant 0.4
fbiC 1303761 c.831T>C synonymous_variant 0.5
fbiC 1303785 c.855G>C synonymous_variant 0.5
fbiC 1304691 c.1761G>C synonymous_variant 1.0
fbiC 1304694 c.1764A>C synonymous_variant 1.0
fbiC 1304778 c.1848T>C synonymous_variant 0.5
fbiC 1304958 c.2028T>G synonymous_variant 0.67
fbiC 1304983 c.2053C>T synonymous_variant 0.67
fbiC 1305231 c.2301C>A synonymous_variant 0.5
fbiC 1305234 c.2304G>C synonymous_variant 0.4
fbiC 1305240 c.2310T>C synonymous_variant 0.4
fbiC 1305243 c.2313T>G synonymous_variant 0.4
fbiC 1305244 c.2314T>C synonymous_variant 0.4
fbiC 1305252 c.2322G>A synonymous_variant 0.33
atpE 1461132 p.Val30Ile missense_variant 0.67
atpE 1461149 c.105T>G synonymous_variant 0.67
atpE 1461150 p.Ile36Val missense_variant 0.67
atpE 1461158 c.114T>G synonymous_variant 1.0
atpE 1461159 p.Val39Ile missense_variant 1.0
atpE 1461170 c.126A>G synonymous_variant 1.0
atpE 1461185 c.141G>T synonymous_variant 1.0
atpE 1461197 c.153A>G synonymous_variant 1.0
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471923 n.78T>C non_coding_transcript_exon_variant 0.83
rrs 1471925 n.80T>C non_coding_transcript_exon_variant 0.83
rrs 1471932 n.87A>G non_coding_transcript_exon_variant 0.83
rrs 1471934 n.89A>G non_coding_transcript_exon_variant 0.83
rrs 1471969 n.124T>C non_coding_transcript_exon_variant 1.0
rrs 1471970 n.125G>A non_coding_transcript_exon_variant 1.0
rrs 1472061 n.216A>T non_coding_transcript_exon_variant 0.67
rrs 1472075 n.230A>G non_coding_transcript_exon_variant 0.67
rrs 1472969 n.1124A>G non_coding_transcript_exon_variant 1.0
rrs 1472970 n.1125C>G non_coding_transcript_exon_variant 1.0
rrs 1472977 n.1132G>C non_coding_transcript_exon_variant 1.0
rrs 1472978 n.1133T>C non_coding_transcript_exon_variant 1.0
rrs 1473105 n.1260G>A non_coding_transcript_exon_variant 0.67
rrs 1473145 n.1300C>T non_coding_transcript_exon_variant 0.6
rrs 1473166 n.1321G>A non_coding_transcript_exon_variant 0.75
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 0.67
rrl 1473756 n.99G>A non_coding_transcript_exon_variant 0.62
rrl 1473758 n.101G>T non_coding_transcript_exon_variant 0.75
rrl 1473806 n.149C>T non_coding_transcript_exon_variant 0.64
rrl 1473877 n.220G>A non_coding_transcript_exon_variant 0.62
rrl 1473898 n.241C>T non_coding_transcript_exon_variant 0.69
rrl 1473943 n.286G>T non_coding_transcript_exon_variant 0.75
rrl 1473945 n.288T>A non_coding_transcript_exon_variant 0.75
rrl 1473946 n.289A>T non_coding_transcript_exon_variant 0.75
rrl 1473986 n.329T>C non_coding_transcript_exon_variant 1.0
rrl 1473987 n.330G>A non_coding_transcript_exon_variant 1.0
rrl 1473995 n.338G>T non_coding_transcript_exon_variant 1.0
rrl 1474001 n.344C>T non_coding_transcript_exon_variant 1.0
rrl 1474009 n.352A>G non_coding_transcript_exon_variant 1.0
rrl 1474012 n.355C>T non_coding_transcript_exon_variant 1.0
rrl 1474093 n.436G>T non_coding_transcript_exon_variant 0.67
rrl 1474099 n.442G>A non_coding_transcript_exon_variant 0.71
rrl 1474103 n.446A>T non_coding_transcript_exon_variant 0.71
rrl 1474140 n.483C>T non_coding_transcript_exon_variant 0.67
rrl 1474151 n.494C>T non_coding_transcript_exon_variant 0.8
rrl 1474181 n.524C>T non_coding_transcript_exon_variant 1.0
rrl 1474249 n.592G>T non_coding_transcript_exon_variant 0.78
rrl 1474291 n.635_649delTTCCTCTCCGGAGGA non_coding_transcript_exon_variant 0.5
rrl 1474308 n.651G>T non_coding_transcript_exon_variant 0.5
rrl 1474310 n.653T>G non_coding_transcript_exon_variant 0.5
rrl 1474639 n.982G>A non_coding_transcript_exon_variant 0.75
rrl 1474812 n.1155G>A non_coding_transcript_exon_variant 0.5
rrl 1474823 n.1166C>T non_coding_transcript_exon_variant 0.5
rrl 1474831 n.1174A>G non_coding_transcript_exon_variant 0.5
rrl 1474904 n.1247G>A non_coding_transcript_exon_variant 0.67
rrl 1475006 n.1349A>T non_coding_transcript_exon_variant 0.5
rrl 1475199 n.1542G>A non_coding_transcript_exon_variant 0.71
rrl 1475206 n.1549C>T non_coding_transcript_exon_variant 0.71
rrl 1475209 n.1552G>C non_coding_transcript_exon_variant 0.62
rrl 1475213 n.1556C>T non_coding_transcript_exon_variant 0.62
rrl 1475249 n.1592T>C non_coding_transcript_exon_variant 0.6
rrl 1475252 n.1595C>T non_coding_transcript_exon_variant 0.6
rrl 1475266 n.1609T>C non_coding_transcript_exon_variant 0.62
rrl 1475267 n.1610G>A non_coding_transcript_exon_variant 0.62
rrl 1475275 n.1618C>T non_coding_transcript_exon_variant 0.56
rrl 1475276 n.1619T>C non_coding_transcript_exon_variant 0.56
rrl 1475291 n.1634A>C non_coding_transcript_exon_variant 0.67
rrl 1475313 n.1656G>A non_coding_transcript_exon_variant 0.5
rrl 1475315 n.1658A>T non_coding_transcript_exon_variant 0.5
rrl 1475355 n.1698C>T non_coding_transcript_exon_variant 0.67
rrl 1475369 n.1712G>T non_coding_transcript_exon_variant 0.83
rrl 1475402 n.1745C>T non_coding_transcript_exon_variant 0.75
rrl 1475419 n.1762C>T non_coding_transcript_exon_variant 0.62
rrl 1475429 n.1772G>A non_coding_transcript_exon_variant 0.64
rrl 1475436 n.1779C>T non_coding_transcript_exon_variant 0.6
rrl 1475483 n.1826C>T non_coding_transcript_exon_variant 0.7
rrl 1475505 n.1848G>A non_coding_transcript_exon_variant 0.78
rrl 1475526 n.1869C>A non_coding_transcript_exon_variant 0.8
rrl 1475599 n.1942A>G non_coding_transcript_exon_variant 1.0
rrl 1475608 n.1951T>C non_coding_transcript_exon_variant 1.0
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 0.5
rrl 1475765 n.2111delG non_coding_transcript_exon_variant 0.75
rrl 1475881 n.2224T>C non_coding_transcript_exon_variant 0.6
rrl 1475988 n.2331A>G non_coding_transcript_exon_variant 0.6
rrl 1476031 n.2374C>T non_coding_transcript_exon_variant 0.44
rrl 1476032 n.2375C>A non_coding_transcript_exon_variant 0.44
rrl 1476033 n.2376T>C non_coding_transcript_exon_variant 0.44
rrl 1476034 n.2377C>A non_coding_transcript_exon_variant 0.44
rrl 1476045 n.2388G>T non_coding_transcript_exon_variant 0.5
rrl 1476047 n.2390G>T non_coding_transcript_exon_variant 0.5
rrl 1476048 n.2391G>A non_coding_transcript_exon_variant 0.5
rrl 1476049 n.2392C>T non_coding_transcript_exon_variant 0.5
rrl 1476086 n.2429G>A non_coding_transcript_exon_variant 0.67
rrl 1476089 n.2432T>C non_coding_transcript_exon_variant 0.5
rrl 1476095 n.2438C>G non_coding_transcript_exon_variant 0.5
rrl 1476115 n.2458T>C non_coding_transcript_exon_variant 1.0
rrl 1476117 n.2460G>C non_coding_transcript_exon_variant 1.0
rrl 1476214 n.2557G>A non_coding_transcript_exon_variant 0.62
rrl 1476224 n.2567A>G non_coding_transcript_exon_variant 0.56
rrl 1476281 n.2624T>C non_coding_transcript_exon_variant 0.67
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 0.5
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 0.5
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 0.5
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 0.67
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 0.67
rrl 1476608 n.2951C>G non_coding_transcript_exon_variant 0.67
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 0.67
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 0.38
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 0.38
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 0.38
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 0.38
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 0.44
rrl 1476726 n.3069A>G non_coding_transcript_exon_variant 0.5
rrl 1476732 n.3075T>C non_coding_transcript_exon_variant 0.43
rrl 1476733 n.3076C>T non_coding_transcript_exon_variant 0.43
rrl 1476750 n.3093T>C non_coding_transcript_exon_variant 0.33
rrl 1476755 n.3098G>A non_coding_transcript_exon_variant 0.33
rrl 1476759 n.3102T>C non_coding_transcript_exon_variant 0.4
inhA 1673523 c.-679G>T upstream_gene_variant 0.33
inhA 1673535 c.-667A>G upstream_gene_variant 0.4
inhA 1673547 c.-655T>C upstream_gene_variant 0.5
fabG1 1673548 p.Ala37Thr missense_variant 0.5
inhA 1673568 c.-634C>G upstream_gene_variant 0.5
inhA 1673574 c.-628C>G upstream_gene_variant 0.5
inhA 1673580 c.-622T>G upstream_gene_variant 0.5
inhA 1674486 c.285T>C synonymous_variant 0.33
inhA 1674504 c.303C>G synonymous_variant 0.4
inhA 1674537 c.336C>G synonymous_variant 0.5
inhA 1674542 p.Ala114Glu missense_variant 0.5
inhA 1674546 c.345T>C synonymous_variant 0.5
inhA 1674549 c.348G>C synonymous_variant 0.5
inhA 1674552 c.351C>G synonymous_variant 0.5
inhA 1674555 c.354G>A synonymous_variant 0.5
inhA 1674561 c.360C>T synonymous_variant 0.6
inhA 1674582 c.381T>C synonymous_variant 0.5
inhA 1674585 c.384T>C synonymous_variant 0.5
inhA 1674589 p.Met130Leu missense_variant 0.5
inhA 1674597 c.396G>A synonymous_variant 0.5
inhA 1674601 p.Leu134Thr missense_variant 0.5
inhA 1674624 c.423A>C synonymous_variant 0.6
inhA 1674630 c.429C>G synonymous_variant 0.5
inhA 1674660 c.459G>C synonymous_variant 0.5
inhA 1674672 c.471C>G synonymous_variant 1.0
inhA 1674822 c.621C>G synonymous_variant 0.67
inhA 1674828 c.627G>A synonymous_variant 1.0
inhA 1674846 p.Ile215Met missense_variant 1.0
inhA 1674864 c.663C>T synonymous_variant 1.0
inhA 1674870 c.669T>C synonymous_variant 1.0
inhA 1674879 c.678T>C synonymous_variant 1.0
rpsA 1833661 c.120A>G synonymous_variant 0.8
rpsA 1833667 c.126C>G synonymous_variant 0.8
rpsA 1833742 c.201A>G synonymous_variant 0.67
rpsA 1833745 c.204G>C synonymous_variant 0.67
rpsA 1833748 c.207C>G synonymous_variant 0.75
rpsA 1833787 c.246C>G synonymous_variant 0.57
rpsA 1833790 c.249T>C synonymous_variant 0.67
rpsA 1833802 c.261A>G synonymous_variant 0.71
rpsA 1833811 c.270G>T synonymous_variant 0.71
rpsA 1833838 c.297G>C synonymous_variant 0.6
rpsA 1833841 c.300C>G synonymous_variant 0.6
rpsA 1833847 c.306C>G synonymous_variant 0.5
rpsA 1833856 c.315A>G synonymous_variant 0.5
rpsA 1833874 c.333T>C synonymous_variant 1.0
rpsA 1833928 c.387G>C synonymous_variant 1.0
rpsA 1833940 c.399C>G synonymous_variant 1.0
rpsA 1833971 c.430C>T synonymous_variant 1.0
rpsA 1833979 c.438T>C synonymous_variant 1.0
rpsA 1834000 c.459G>C synonymous_variant 0.83
rpsA 1834021 c.480C>T synonymous_variant 0.75
rpsA 1834030 c.489C>G synonymous_variant 0.75
rpsA 1834096 c.555G>C synonymous_variant 0.75
rpsA 1834099 c.558C>G synonymous_variant 0.75
rpsA 1834102 c.561T>C synonymous_variant 0.75
rpsA 1834105 c.564C>G synonymous_variant 0.75
rpsA 1834108 c.567C>G synonymous_variant 0.8
rpsA 1834222 c.681T>C synonymous_variant 0.57
rpsA 1834249 c.708T>C synonymous_variant 0.75
rpsA 1834261 c.720A>G synonymous_variant 1.0
rpsA 1834264 c.723G>C synonymous_variant 1.0
rpsA 1834303 c.762T>C synonymous_variant 1.0
rpsA 1834306 c.765T>C synonymous_variant 1.0
rpsA 1834348 c.807T>C synonymous_variant 0.5
rpsA 1834366 c.825A>G synonymous_variant 0.38
rpsA 1834378 c.837T>C synonymous_variant 0.3
rpsA 1834396 c.855G>C synonymous_variant 0.3
rpsA 1834411 c.870T>C synonymous_variant 0.33
rpsA 1834417 c.876G>C synonymous_variant 0.38
rpsA 1834423 c.882G>C synonymous_variant 0.5
rpsA 1834435 c.894G>C synonymous_variant 0.4
rpsA 1834451 c.910T>C synonymous_variant 0.44
rpsA 1834465 c.924T>C synonymous_variant 0.43
rpsA 1834468 c.927A>G synonymous_variant 0.5
rpsA 1834489 c.948T>C synonymous_variant 0.67
rpsA 1834510 c.969C>T synonymous_variant 0.75
rpsA 1834513 c.972C>G synonymous_variant 0.75
rpsA 1834684 c.1143C>T synonymous_variant 0.33
rpsA 1834690 c.1149T>C synonymous_variant 0.4
rpsA 1834732 c.1191T>C synonymous_variant 0.5
rpsA 1834733 p.Ala398Ser missense_variant 0.5
rpsA 1834738 c.1197A>G synonymous_variant 0.5
rpsA 1834753 c.1212T>C synonymous_variant 0.5
rpsA 1834765 p.Glu408Asp missense_variant 0.4
rpsA 1834775 p.Ala412Thr missense_variant 0.4
tlyA 1917945 c.6A>T synonymous_variant 0.5
tlyA 1917951 c.12T>C synonymous_variant 0.6
tlyA 1917972 c.33A>G synonymous_variant 1.0
tlyA 1917975 c.36C>G synonymous_variant 0.5
tlyA 1917981 c.42G>C synonymous_variant 0.5
tlyA 1917990 c.51G>C synonymous_variant 0.67
tlyA 1917993 c.54A>G synonymous_variant 0.67
tlyA 1917996 c.57A>G synonymous_variant 1.0
tlyA 1918002 c.63A>G synonymous_variant 1.0
tlyA 1918036 p.Arg33Ser missense_variant 1.0
katG 2154724 p.Arg463Leu missense_variant 1.0
katG 2155704 c.408C>G synonymous_variant 1.0
katG 2155716 c.396T>G synonymous_variant 0.67
katG 2155722 c.390G>C synonymous_variant 0.67
katG 2155728 c.384G>C synonymous_variant 0.67
PPE35 2167926 p.Leu896Ser missense_variant 1.0
PPE35 2170461 p.Gly51Glu missense_variant 1.0
pncA 2289047 c.195C>T synonymous_variant 1.0
pncA 2289365 c.-125delC upstream_gene_variant 1.0
pncA 2289925 c.-684T>C upstream_gene_variant 0.5
pncA 2289930 c.-689A>G upstream_gene_variant 0.5
pncA 2289943 c.-702T>G upstream_gene_variant 0.5
pncA 2289948 c.-707C>T upstream_gene_variant 0.5
pncA 2289949 c.-708A>G upstream_gene_variant 0.5
pncA 2289987 c.-746C>T upstream_gene_variant 0.4
pncA 2289991 c.-750G>C upstream_gene_variant 0.4
pncA 2289994 c.-753A>G upstream_gene_variant 0.4
pncA 2289997 c.-756G>C upstream_gene_variant 0.4
pncA 2290009 c.-768A>G upstream_gene_variant 0.5
pncA 2290015 c.-774A>C upstream_gene_variant 0.4
kasA 2518768 c.654C>T synonymous_variant 0.67
kasA 2518777 c.663C>T synonymous_variant 0.67
kasA 2518783 c.669T>C synonymous_variant 0.67
kasA 2518789 c.675G>C synonymous_variant 0.5
kasA 2518792 c.678C>A synonymous_variant 0.5
kasA 2518795 c.681C>G synonymous_variant 0.5
kasA 2518825 c.711T>C synonymous_variant 0.5
kasA 2519062 c.948T>G synonymous_variant 0.4
kasA 2519068 c.954C>T synonymous_variant 0.4
kasA 2519072 p.Ala320Thr missense_variant 0.33
ahpC 2726105 c.-88G>A upstream_gene_variant 1.0
ahpC 2726204 c.12A>G synonymous_variant 0.5
ahpC 2726210 c.18T>C synonymous_variant 0.5
ahpC 2726216 c.24T>C synonymous_variant 0.5
ahpC 2726219 c.27A>G synonymous_variant 0.5
ahpC 2726232 p.Gln14Glu missense_variant 0.67
ahpC 2726243 c.51T>G synonymous_variant 0.67
ahpC 2726244 c.52_54delCTCinsTTG synonymous_variant 0.67
ahpC 2726251 p.Gly20Ala missense_variant 0.67
ahpC 2726255 c.63T>C synonymous_variant 0.67
ahpC 2726258 c.66C>T synonymous_variant 0.67
ahpC 2726303 c.111T>C synonymous_variant 1.0
ahpC 2726311 p.Ser40Asn missense_variant 1.0
ahpC 2726315 p.Asp41Glu missense_variant 1.0
ahpC 2726318 p.Glu42Asp missense_variant 1.0
ahpC 2726322 p.Pro44Ala missense_variant 1.0
ahpC 2726330 c.138G>A synonymous_variant 1.0
ahpC 2726336 c.144G>C synonymous_variant 1.0
ahpC 2726348 c.156T>C synonymous_variant 1.0
ahpC 2726357 c.165A>G synonymous_variant 1.0
ahpC 2726366 c.174G>C synonymous_variant 0.67
ahpC 2726591 c.399C>G synonymous_variant 0.33
ahpC 2726593 p.Val134Ala missense_variant 0.33
ahpC 2726600 c.408T>C synonymous_variant 0.29
ahpC 2726601 p.Ile137Leu missense_variant 0.29
ahpC 2726638 p.Ala149Val missense_variant 0.4
ahpC 2726645 c.453C>G synonymous_variant 0.4
ahpC 2726657 c.465A>C synonymous_variant 0.5
folC 2746375 c.1224G>C synonymous_variant 0.33
Rv2752c 3064838 c.1354T>C synonymous_variant 0.4
Rv2752c 3064860 c.1332G>C synonymous_variant 0.5
Rv2752c 3064863 c.1329G>C synonymous_variant 0.5
Rv2752c 3064914 c.1278T>G synonymous_variant 0.67
Rv2752c 3064962 c.1230C>G synonymous_variant 0.5
Rv2752c 3064973 p.Ala407Ser missense_variant 0.4
Rv2752c 3064974 c.1218T>C synonymous_variant 0.4
Rv2752c 3064995 c.1197C>G synonymous_variant 0.33
Rv2752c 3064998 c.1194A>G synonymous_variant 0.4
Rv2752c 3065007 c.1185G>C synonymous_variant 0.4
Rv2752c 3065901 c.291A>C synonymous_variant 0.5
Rv2752c 3065916 c.276T>C synonymous_variant 0.5
Rv2752c 3065925 p.Ala89Gly missense_variant 0.5
Rv2752c 3065928 c.264G>C synonymous_variant 0.5
Rv2752c 3065946 p.Gly82Ala missense_variant 0.6
Rv2752c 3065955 c.235_237delTTGinsCTC synonymous_variant 0.6
Rv2752c 3065979 c.213T>C synonymous_variant 0.5
Rv2752c 3066118 p.Asn25Ser missense_variant 1.0
Rv2752c 3066150 c.42C>A synonymous_variant 1.0
Rv2752c 3066153 p.Ser13Thr missense_variant 1.0
Rv2752c 3066158 p.Thr12Ala missense_variant 1.0
Rv2752c 3066161 c.31C>T synonymous_variant 1.0
Rv2752c 3066162 c.30C>A synonymous_variant 1.0
Rv2752c 3066165 c.27T>C synonymous_variant 1.0
Rv2752c 3066176 p.Pro6Ala missense_variant 1.0
Rv2752c 3066177 c.15T>C synonymous_variant 1.0
thyX 3067510 c.436C>T synonymous_variant 1.0
thyX 3067515 p.Ser144Thr missense_variant 1.0
thyX 3067781 c.165C>G synonymous_variant 1.0
thyX 3067793 c.153T>C synonymous_variant 1.0
thyX 3067799 c.147G>A synonymous_variant 1.0
thyX 3067802 c.144C>G synonymous_variant 1.0
thyX 3067814 c.132T>C synonymous_variant 1.0
thyX 3067850 c.96A>C synonymous_variant 0.67
thyA 3073812 c.660C>G synonymous_variant 0.67
thyA 3073815 c.657G>A synonymous_variant 0.67
thyA 3073824 c.648A>G synonymous_variant 0.67
thyA 3073827 c.645A>G synonymous_variant 0.67
thyA 3073839 c.633T>C synonymous_variant 0.8
thyA 3073860 c.612C>G synonymous_variant 0.8
thyA 3073863 c.609T>C synonymous_variant 0.8
thyA 3073866 c.606C>G synonymous_variant 0.8
thyA 3073872 p.Ile200Val missense_variant 0.8
thyA 3073892 c.580T>C synonymous_variant 0.8
thyA 3073898 p.Ala192Ser missense_variant 0.8
thyA 3073917 c.555C>G synonymous_variant 0.75
thyA 3073920 c.552C>G synonymous_variant 0.75
thyA 3073925 c.547T>C synonymous_variant 0.67
thyA 3073929 c.543T>C synonymous_variant 0.5
fbiD 3339462 c.345C>T synonymous_variant 0.67
fbiD 3339474 c.357A>G synonymous_variant 1.0
fbiD 3339475 c.358_360delTTAinsCTG synonymous_variant 1.0
fbiD 3339483 c.366A>C synonymous_variant 1.0
fbiD 3339489 c.372A>G synonymous_variant 1.0
fbiD 3339492 c.375C>G synonymous_variant 1.0
fbiD 3339501 c.384A>C synonymous_variant 1.0
fbiD 3339502 p.Ile129Val missense_variant 1.0
fbiD 3339505 p.Ser130Ala missense_variant 1.0
fbiD 3339513 c.396A>C synonymous_variant 1.0
fbiD 3339519 p.His134Gln missense_variant 1.0
fbiD 3339522 c.405T>C synonymous_variant 1.0
fbiD 3339549 c.432T>G synonymous_variant 1.0
fbiD 3339551 p.Gly145Ala missense_variant 1.0
fprA 3473996 c.-11_-10insA upstream_gene_variant 1.0
fprA 3474114 c.108C>T synonymous_variant 0.4
fprA 3474130 c.124_126delTTGinsCTC synonymous_variant 0.5
fprA 3474135 c.129G>C synonymous_variant 0.5
fprA 3474138 c.132T>C synonymous_variant 0.5
fprA 3474141 c.135C>G synonymous_variant 0.5
fprA 3474162 c.156G>C synonymous_variant 0.8
fprA 3474171 c.165G>C synonymous_variant 0.8
fprA 3474177 c.171C>T synonymous_variant 0.8
fprA 3474180 c.174C>G synonymous_variant 0.8
fprA 3474210 c.204A>G synonymous_variant 0.67
fprA 3474321 c.315C>T synonymous_variant 0.5
fprA 3474324 c.318G>C synonymous_variant 0.5
fprA 3474333 c.327T>C synonymous_variant 0.5
fprA 3474337 p.Met111Ala missense_variant 0.5
fprA 3474340 c.334T>C synonymous_variant 0.5
fprA 3474354 c.348T>C synonymous_variant 0.4
fprA 3474360 p.Asp118Glu missense_variant 0.4
fprA 3474361 c.355C>T synonymous_variant 0.4
fprA 3474372 c.366T>C synonymous_variant 0.5
fprA 3474393 c.387C>G synonymous_variant 0.5
fbiB 3642560 c.1026T>C synonymous_variant 0.75
fbiB 3642566 c.1032A>G synonymous_variant 0.75
fbiB 3642581 c.1047A>C synonymous_variant 0.75
fbiB 3642587 p.Met351Ile missense_variant 0.75
fbiB 3642593 c.1059G>T synonymous_variant 0.75
fbiB 3642602 c.1068A>C synonymous_variant 0.75
fbiB 3642605 c.1071A>C synonymous_variant 0.75
fbiB 3642609 c.1075_1076delAGinsTC synonymous_variant 0.75
fbiB 3642614 c.1080C>T synonymous_variant 0.75
fbiB 3642617 c.1083C>G synonymous_variant 0.75
fbiB 3642620 c.1086T>C synonymous_variant 0.8
fbiB 3642656 c.1122G>C synonymous_variant 0.67
fbiB 3642677 c.1143A>G synonymous_variant 0.67
fbiB 3642680 c.1146A>G synonymous_variant 0.67
fbiB 3642684 c.1150T>C synonymous_variant 0.67
fbiB 3642701 c.1167C>G synonymous_variant 0.67
fbiB 3642719 c.1185T>C synonymous_variant 0.75
fbiB 3642731 c.1197C>G synonymous_variant 0.67
rpoA 3877553 p.Glu319Gln missense_variant 0.5
rpoA 3877571 p.Pro313Ala missense_variant 0.67
rpoA 3877587 c.921A>G synonymous_variant 0.67
rpoA 3877613 p.Ile299Val missense_variant 0.8
rpoA 3877656 c.852T>G synonymous_variant 0.75
rpoA 3877668 c.840A>G synonymous_variant 1.0
rpoA 3877679 p.Ala277Ser missense_variant 1.0
rpoA 3877686 c.822A>G synonymous_variant 1.0
rpoA 3877692 c.816G>C synonymous_variant 1.0
rpoA 3877704 c.804G>C synonymous_variant 0.75
rpoA 3877737 c.771G>C synonymous_variant 0.67
rpoA 3877743 c.765T>C synonymous_variant 0.75
rpoA 3877764 c.744C>G synonymous_variant 0.6
rpoA 3877770 c.738A>G synonymous_variant 0.6
rpoA 3877776 c.732T>C synonymous_variant 0.6
rpoA 3877782 c.726T>C synonymous_variant 0.56
rpoA 3877791 c.717C>G synonymous_variant 0.71
rpoA 3877818 c.690A>G synonymous_variant 0.83
rpoA 3877839 c.669G>C synonymous_variant 0.8
rpoA 3877848 c.660C>T synonymous_variant 0.8
rpoA 3877857 c.651G>A synonymous_variant 1.0
rpoA 3877866 c.642G>C synonymous_variant 1.0
rpoA 3877875 c.633T>G synonymous_variant 0.75
rpoA 3877878 c.630G>C synonymous_variant 0.8
rpoA 3877890 c.618C>T synonymous_variant 0.8
rpoA 3877896 c.612G>C synonymous_variant 0.8
rpoA 3877900 p.Ser203Asn missense_variant 0.67
rpoA 3877905 c.603A>G synonymous_variant 0.6
rpoA 3877909 p.Asn200Ser missense_variant 0.6
rpoA 3877920 c.588G>C synonymous_variant 0.6
rpoA 3877923 c.585C>T synonymous_variant 0.5
rpoA 3877926 c.582G>C synonymous_variant 0.43
rpoA 3877962 c.546G>T synonymous_variant 0.33
rpoA 3878040 c.468T>C synonymous_variant 0.5
rpoA 3878055 c.453A>G synonymous_variant 0.6
rpoA 3878058 c.450G>T synonymous_variant 0.6
rpoA 3878061 c.447G>C synonymous_variant 0.6
rpoA 3878067 c.441C>G synonymous_variant 0.6
rpoA 3878070 c.438T>C synonymous_variant 0.6
rpoA 3878076 c.432C>T synonymous_variant 0.6
rpoA 3878094 c.414C>G synonymous_variant 0.67
rpoA 3878217 c.291A>G synonymous_variant 1.0
rpoA 3878226 c.282C>G synonymous_variant 0.8
rpoA 3878232 c.276G>C synonymous_variant 0.75
rpoA 3878247 c.261G>C synonymous_variant 0.8
rpoA 3878271 c.237T>C synonymous_variant 0.83
rpoA 3878284 p.Glu75Ala missense_variant 0.83
rpoA 3878292 c.216T>C synonymous_variant 0.75
rpoA 3878298 c.210A>G synonymous_variant 0.75
rpoA 3878304 c.204G>C synonymous_variant 0.71
rpoA 3878313 c.195G>C synonymous_variant 0.6
rpoA 3878322 c.186A>G synonymous_variant 0.8
rpoA 3878331 c.177A>G synonymous_variant 0.83
rpoA 3878334 c.174T>C synonymous_variant 0.83
rpoA 3878337 c.171T>C synonymous_variant 0.83
rpoA 3878346 c.162T>C synonymous_variant 0.67
rpoA 3878364 c.144A>T synonymous_variant 0.6
rpoA 3878367 c.141C>G synonymous_variant 0.67
rpoA 3878376 c.132G>C synonymous_variant 0.67
rpoA 3878385 c.123C>G synonymous_variant 0.6
rpoA 3878388 c.120C>G synonymous_variant 0.6
rpoA 3878391 c.117T>C synonymous_variant 0.75
rpoA 3878415 c.93C>T synonymous_variant 0.6
clpC1 4038255 p.Val817Lys missense_variant 0.5
clpC1 4038271 p.Pro812Ala missense_variant 0.33
clpC1 4038272 p.Gly811Ser missense_variant 0.33
clpC1 4038275 c.2430A>G synonymous_variant 0.33
clpC1 4038278 c.2427T>C synonymous_variant 0.29
clpC1 4038293 c.2412G>C synonymous_variant 0.29
clpC1 4038302 c.2403C>G synonymous_variant 0.25
clpC1 4038308 c.2397G>T synonymous_variant 0.22
clpC1 4038314 c.2391T>C synonymous_variant 0.22
clpC1 4038317 c.2388G>C synonymous_variant 0.22
clpC1 4038320 c.2385G>T synonymous_variant 0.22
clpC1 4038486 p.Gly740Asn missense_variant 0.4
clpC1 4038489 p.Ala739Gly missense_variant 0.33
clpC1 4038494 c.2211G>C synonymous_variant 0.33
clpC1 4038497 p.Ser736Gln missense_variant 0.33
clpC1 4038509 c.2196C>T synonymous_variant 0.33
clpC1 4038530 p.Glu725Asp missense_variant 0.5
clpC1 4038541 c.2164C>T synonymous_variant 0.44
clpC1 4038596 c.2109A>G synonymous_variant 0.33
clpC1 4038749 c.1956C>G synonymous_variant 0.5
clpC1 4038755 c.1950G>T synonymous_variant 0.5
clpC1 4038770 c.1935C>T synonymous_variant 0.4
clpC1 4038773 c.1932T>C synonymous_variant 0.4
clpC1 4038782 c.1923G>C synonymous_variant 0.5
clpC1 4038905 c.1800A>G synonymous_variant 0.57
clpC1 4038908 c.1797C>G synonymous_variant 0.57
clpC1 4038914 c.1791G>C synonymous_variant 0.67
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 0.6
clpC1 4038953 c.1752A>G synonymous_variant 0.67
clpC1 4038956 c.1749T>C synonymous_variant 0.67
clpC1 4038965 c.1740T>C synonymous_variant 0.62
clpC1 4038971 c.1734T>C synonymous_variant 0.71
clpC1 4038974 c.1731T>C synonymous_variant 0.71
clpC1 4038989 c.1716T>C synonymous_variant 0.8
clpC1 4038997 c.1708T>C synonymous_variant 0.75
clpC1 4039004 c.1701C>G synonymous_variant 0.6
clpC1 4039022 c.1683A>G synonymous_variant 0.6
clpC1 4039097 c.1608G>C synonymous_variant 0.71
clpC1 4039103 c.1602T>C synonymous_variant 0.83
clpC1 4039106 c.1599G>C synonymous_variant 0.83
clpC1 4039112 c.1593C>G synonymous_variant 0.83
clpC1 4039121 c.1584T>C synonymous_variant 0.83
clpC1 4039142 c.1563A>G synonymous_variant 0.8
clpC1 4039145 c.1560G>C synonymous_variant 0.8
clpC1 4039169 p.Glu512Asp missense_variant 1.0
clpC1 4039172 c.1533A>G synonymous_variant 1.0
clpC1 4039178 c.1527G>C synonymous_variant 1.0
clpC1 4039183 c.1522T>C synonymous_variant 1.0
clpC1 4039186 c.1519C>T synonymous_variant 1.0
clpC1 4039226 c.1479T>C synonymous_variant 0.6
clpC1 4039229 c.1476C>G synonymous_variant 0.6
clpC1 4039274 c.1431G>C synonymous_variant 0.5
clpC1 4039286 c.1419T>C synonymous_variant 0.5
clpC1 4039295 c.1410A>C synonymous_variant 0.6
clpC1 4039298 c.1407T>C synonymous_variant 0.6
clpC1 4039319 c.1386T>C synonymous_variant 1.0
clpC1 4039322 c.1383T>C synonymous_variant 0.75
clpC1 4039328 c.1377A>C synonymous_variant 0.75
clpC1 4039331 c.1374C>G synonymous_variant 0.75
clpC1 4039337 p.Thr456Gln missense_variant 0.75
clpC1 4039349 c.1356C>T synonymous_variant 0.8
clpC1 4039352 c.1353C>G synonymous_variant 0.83
clpC1 4039364 c.1341C>G synonymous_variant 1.0
clpC1 4039391 c.1314T>G synonymous_variant 0.8
clpC1 4039409 c.1296T>C synonymous_variant 0.5
clpC1 4039412 c.1293T>G synonymous_variant 0.5
clpC1 4039415 p.Glu430Asp missense_variant 0.5
clpC1 4039430 c.1275T>C synonymous_variant 0.75
clpC1 4039442 c.1263A>G synonymous_variant 0.5
clpC1 4039589 c.1116G>C synonymous_variant 0.6
clpC1 4039610 c.1095G>C synonymous_variant 0.6
clpC1 4039616 c.1089G>C synonymous_variant 0.6
clpC1 4039661 c.1044T>G synonymous_variant 0.5
clpC1 4039664 c.1041G>C synonymous_variant 0.6
clpC1 4039694 c.1011G>C synonymous_variant 0.4
clpC1 4039724 c.981A>G synonymous_variant 0.8
clpC1 4039751 c.954A>G synonymous_variant 1.0
clpC1 4039757 c.948A>G synonymous_variant 1.0
clpC1 4039760 c.945T>C synonymous_variant 1.0
clpC1 4039766 c.939T>C synonymous_variant 1.0
clpC1 4039769 c.936C>G synonymous_variant 1.0
clpC1 4039775 c.930G>C synonymous_variant 1.0
clpC1 4039778 c.927A>G synonymous_variant 1.0
clpC1 4039781 c.924G>C synonymous_variant 1.0
clpC1 4039865 c.840T>C synonymous_variant 0.4
clpC1 4039979 c.726C>G synonymous_variant 0.8
clpC1 4039988 c.717C>G synonymous_variant 0.83
clpC1 4039991 c.714G>C synonymous_variant 0.83
clpC1 4040021 c.684A>C synonymous_variant 1.0
clpC1 4040024 c.681A>G synonymous_variant 1.0
clpC1 4040033 c.672G>C synonymous_variant 1.0
clpC1 4040036 c.669C>G synonymous_variant 1.0
clpC1 4040105 c.600C>G synonymous_variant 0.75
clpC1 4040147 c.558A>G synonymous_variant 0.75
clpC1 4040162 c.543G>C synonymous_variant 1.0
clpC1 4040165 c.540G>C synonymous_variant 1.0
clpC1 4040171 c.534C>G synonymous_variant 1.0
clpC1 4040246 c.459C>G synonymous_variant 0.5
clpC1 4040249 c.456A>G synonymous_variant 0.4
clpC1 4040267 c.438A>G synonymous_variant 0.4
clpC1 4040270 c.435C>T synonymous_variant 0.4
clpC1 4040318 c.387C>G synonymous_variant 0.4
clpC1 4040330 c.375C>G synonymous_variant 0.4
clpC1 4040342 c.363C>G synonymous_variant 0.29
clpC1 4040354 c.351A>G synonymous_variant 0.33
clpC1 4040363 c.342A>T synonymous_variant 0.33
clpC1 4040369 c.336C>G synonymous_variant 0.33
clpC1 4040380 c.325T>C synonymous_variant 0.33
clpC1 4040381 c.324T>C synonymous_variant 0.33
clpC1 4040387 c.318A>G synonymous_variant 0.33
clpC1 4040393 c.312G>C synonymous_variant 0.33
clpC1 4040411 c.294T>C synonymous_variant 0.4
clpC1 4040423 c.282A>G synonymous_variant 0.33
clpC1 4040426 c.279T>C synonymous_variant 0.33
clpC1 4040431 c.274T>C synonymous_variant 0.33
clpC1 4040644 c.61A>C synonymous_variant 0.67
clpC1 4040654 c.51G>A synonymous_variant 0.67
clpC1 4040657 c.48T>G synonymous_variant 0.67
clpC1 4040695 c.10C>A synonymous_variant 0.67
clpC1 4040699 c.6C>T synonymous_variant 0.5
clpC1 4040706 c.-4_-3delAC upstream_gene_variant 0.5
clpC1 4040711 c.-7G>A upstream_gene_variant 0.5
clpC1 4040728 c.-24G>T upstream_gene_variant 0.5
embC 4240726 c.864G>C synonymous_variant 0.29
embC 4240780 c.918T>C synonymous_variant 0.33
embC 4240783 c.921G>C synonymous_variant 0.33
embC 4240789 c.927T>C synonymous_variant 0.33
embC 4240819 c.957A>G synonymous_variant 0.4
embC 4241089 c.1227C>G synonymous_variant 1.0
embC 4241095 c.1233C>T synonymous_variant 1.0
embC 4241107 c.1245G>C synonymous_variant 1.0
embC 4241140 c.1278A>G synonymous_variant 1.0
embC 4241146 c.1284C>G synonymous_variant 1.0
embC 4241158 c.1296T>C synonymous_variant 1.0
embC 4241161 c.1299C>G synonymous_variant 1.0
embC 4241162 c.1300T>C synonymous_variant 1.0
embC 4241170 c.1308G>C synonymous_variant 1.0
embC 4241173 c.1311C>T synonymous_variant 1.0
embC 4241203 c.1341T>C synonymous_variant 1.0
embC 4241206 c.1344G>C synonymous_variant 1.0
embC 4241218 c.1356G>C synonymous_variant 0.67
embC 4241449 c.1587C>G synonymous_variant 0.75
embC 4241453 p.Ile531Val missense_variant 0.75
embC 4241479 c.1617C>G synonymous_variant 0.67
embC 4241480 c.1618T>C synonymous_variant 0.67
embC 4241488 c.1626G>C synonymous_variant 0.67
embC 4241496 p.Ala545Gly missense_variant 0.67
embC 4241500 c.1638A>C synonymous_variant 0.67
embC 4241501 p.Ser547Thr missense_variant 1.0
embC 4241506 c.1644G>C synonymous_variant 1.0
embC 4241518 c.1656A>G synonymous_variant 1.0
embC 4241521 c.1659T>C synonymous_variant 1.0
embC 4241530 c.1668C>G synonymous_variant 1.0
embC 4241536 c.1674A>G synonymous_variant 0.67
embC 4241562 p.Arg567His missense_variant 0.75
embC 4241620 p.Trp586* stop_gained 0.4
embC 4241719 c.1857G>C synonymous_variant 0.5
embC 4241727 p.Phe622Tyr missense_variant 0.5
embC 4241741 p.Val627Leu missense_variant 0.5
embC 4241747 p.Val629Leu missense_variant 0.5
embC 4241750 p.Leu630Val missense_variant 0.5
embC 4241755 c.1893C>G synonymous_variant 0.5
embC 4241770 c.1908T>C synonymous_variant 0.5
embC 4241791 c.1929G>C synonymous_variant 0.5
embC 4241794 c.1932C>G synonymous_variant 0.5
embC 4241797 c.1935C>T synonymous_variant 0.5
embC 4241809 c.1947A>C synonymous_variant 0.5
embC 4242075 p.Arg738Gln missense_variant 1.0
embC 4242208 c.2346T>G synonymous_variant 1.0
embC 4242220 c.2358A>G synonymous_variant 0.6
embC 4242229 c.2367C>A synonymous_variant 0.6
embC 4242245 p.Thr795Arg missense_variant 0.6
embA 4242268 c.-965T>G upstream_gene_variant 0.75
embA 4242271 c.-962A>G upstream_gene_variant 0.75
embA 4242274 c.-959G>T upstream_gene_variant 0.75
embA 4242277 c.-956T>C upstream_gene_variant 0.6
embA 4242283 c.-950T>C upstream_gene_variant 0.6
embC 4242287 p.Leu809Val missense_variant 0.6
embA 4242643 c.-590C>T upstream_gene_variant 1.0
embC 4242689 p.Val943Ile missense_variant 1.0
embC 4242710 p.Gln950Glu missense_variant 0.67
embA 4242715 c.-518T>C upstream_gene_variant 0.67
embA 4242742 c.-491C>G upstream_gene_variant 0.67
embA 4242748 c.-485A>G upstream_gene_variant 0.67
embA 4242754 c.-479G>C upstream_gene_variant 0.67
embC 4242764 p.Val968Leu missense_variant 0.67
embA 4242772 c.-461G>C upstream_gene_variant 0.5
embA 4244547 p.Ile439Val missense_variant 1.0
embA 4244557 p.Arg442Thr missense_variant 1.0
embA 4244582 c.1350T>C synonymous_variant 0.5
embA 4244585 c.1353A>G synonymous_variant 0.5
embA 4244611 p.Ala460Gly missense_variant 0.5
embA 4245101 c.1869G>C synonymous_variant 1.0
embA 4245137 c.1905T>C synonymous_variant 1.0
embA 4245146 c.1914G>A synonymous_variant 1.0
embA 4245149 c.1917C>G synonymous_variant 1.0
embA 4245153 p.Ile641Val missense_variant 1.0
embA 4245182 c.1950T>C synonymous_variant 1.0
embA 4245189 c.1957C>T synonymous_variant 0.83
embA 4245198 p.Leu656Ile missense_variant 0.8
embA 4245207 c.1975T>C synonymous_variant 0.8
embA 4245215 c.1983A>C synonymous_variant 0.75
embA 4245222 p.Tyr664Gln missense_variant 0.8
embA 4245248 c.2016G>C synonymous_variant 0.67
embA 4245257 c.2025A>G synonymous_variant 0.67
embA 4245263 c.2031A>G synonymous_variant 0.67
embA 4245282 p.Ile684Val missense_variant 1.0
embA 4245285 c.2053T>C synonymous_variant 1.0
embA 4245290 c.2058C>G synonymous_variant 1.0
embA 4245293 c.2061T>G synonymous_variant 1.0
embA 4245296 c.2064G>C synonymous_variant 1.0
embA 4245299 c.2067A>G synonymous_variant 1.0
embB 4245842 c.-672G>C upstream_gene_variant 0.5
embB 4245845 c.-669T>C upstream_gene_variant 0.5
embB 4245851 c.-663G>C upstream_gene_variant 0.5
embB 4245860 c.-654C>G upstream_gene_variant 0.5
embB 4246157 c.-357A>G upstream_gene_variant 1.0
embB 4246164 c.-350T>C upstream_gene_variant 1.0
embB 4246184 c.-330A>C upstream_gene_variant 1.0
embB 4246196 c.-318C>G upstream_gene_variant 1.0
embB 4246205 c.-309A>G upstream_gene_variant 1.0
embB 4246211 c.-303T>C upstream_gene_variant 1.0
embB 4246217 c.-297G>A upstream_gene_variant 1.0
embB 4246220 c.-294T>C upstream_gene_variant 1.0
embB 4246223 c.-291C>T upstream_gene_variant 1.0
embA 4246227 p.Ile999Val missense_variant 1.0
embB 4246235 c.-279G>A upstream_gene_variant 1.0
embA 4246242 p.Gln1004Gly missense_variant 0.75
embB 4246250 c.-264G>C upstream_gene_variant 0.75
embB 4246256 c.-258G>T upstream_gene_variant 0.67
embB 4246259 c.-255G>C upstream_gene_variant 0.67
embA 4246264 p.His1011Arg missense_variant 0.67
embB 4246292 c.-222A>G upstream_gene_variant 0.67
embA 4246305 p.Ser1025Glu missense_variant 0.67
embA 4246308 p.Thr1026Ala missense_variant 0.67
embB 4246316 c.-198T>G upstream_gene_variant 0.5
embB 4246319 c.-195G>C upstream_gene_variant 0.5
embA 4246329 p.Thr1033Ala missense_variant 0.5
embB 4246349 c.-165C>G upstream_gene_variant 0.67
embA 4246359 p.Ala1043Ser missense_variant 0.67
embB 4246367 c.-147C>T upstream_gene_variant 0.67
embB 4247401 c.888T>C synonymous_variant 0.4
embB 4247407 c.894G>C synonymous_variant 0.33
embB 4247425 c.912G>C synonymous_variant 0.33
embB 4247434 c.921C>G synonymous_variant 0.33
embB 4247437 c.924A>G synonymous_variant 0.33
embB 4247440 c.927C>G synonymous_variant 0.33
embB 4247446 c.933C>T synonymous_variant 0.4
embB 4247464 c.951C>G synonymous_variant 0.62
embB 4247470 c.957T>C synonymous_variant 0.67
embB 4247491 c.978G>C synonymous_variant 0.7
embB 4247497 c.984T>C synonymous_variant 0.7
embB 4247512 c.999T>C synonymous_variant 0.62
embB 4247539 c.1026T>C synonymous_variant 0.71
embB 4247554 c.1041T>C synonymous_variant 0.67
embB 4247566 c.1053C>A synonymous_variant 0.5
embB 4247692 c.1179C>G synonymous_variant 0.67
embB 4247716 c.1203C>T synonymous_variant 0.67
embB 4247722 c.1209G>C synonymous_variant 0.67
embB 4247725 c.1212G>C synonymous_variant 0.5
embB 4247729 p.Gly406Pro missense_variant 0.67
embB 4247746 c.1233C>T synonymous_variant 0.6
embB 4247761 c.1248T>C synonymous_variant 0.6
embB 4247797 c.1284C>G synonymous_variant 0.4
embB 4247800 c.1287A>T synonymous_variant 0.4
embB 4247803 c.1290G>C synonymous_variant 0.4
embB 4247815 c.1302C>G synonymous_variant 0.4
embB 4247819 p.Val436Ile missense_variant 0.33
embB 4247830 c.1317A>G synonymous_variant 0.5
embB 4247836 c.1323A>G synonymous_variant 0.5
embB 4247839 c.1326G>C synonymous_variant 0.33
embB 4247866 c.1353G>C synonymous_variant 0.33
embB 4247875 c.1362G>C synonymous_variant 0.33
embB 4247876 c.1363C>T synonymous_variant 0.33
embB 4247881 c.1368G>C synonymous_variant 0.33
embB 4247887 c.1374C>T synonymous_variant 0.33
embB 4248070 c.1557T>C synonymous_variant 0.75
embB 4248085 c.1572T>C synonymous_variant 0.75
embB 4248097 c.1584C>G synonymous_variant 0.6
embB 4248130 c.1617G>C synonymous_variant 0.75
embB 4248142 c.1629T>C synonymous_variant 0.67
embB 4248143 c.1630T>C synonymous_variant 0.67
embB 4248157 c.1644A>G synonymous_variant 0.75
embB 4248172 c.1659G>C synonymous_variant 0.67
embB 4248199 c.1686A>G synonymous_variant 0.75
embB 4248200 p.Ile563Val missense_variant 0.75
embB 4248205 c.1692C>G synonymous_variant 0.75
embB 4248206 p.Ser565Gly missense_variant 0.75
embB 4248220 c.1707A>C synonymous_variant 0.75
embB 4248304 c.1791G>C synonymous_variant 0.67
embB 4248316 c.1803C>G synonymous_variant 0.5
embB 4248319 c.1806A>G synonymous_variant 0.5
embB 4248343 c.1830G>C synonymous_variant 0.67
embB 4248350 c.1837T>C synonymous_variant 0.67
embB 4248355 c.1842A>G synonymous_variant 0.67
embB 4248358 c.1845C>G synonymous_variant 0.67
embB 4248361 c.1848A>C synonymous_variant 0.67
embB 4248362 p.Ser617Ala missense_variant 0.67
embB 4248373 c.1860C>G synonymous_variant 0.5
embB 4249486 c.2973T>G synonymous_variant 0.5
embB 4249498 c.2985G>C synonymous_variant 0.5
aftB 4269159 c.-323G>C upstream_gene_variant 0.67
ubiA 4269164 p.Leu224Met missense_variant 0.67
aftB 4269165 c.-329G>C upstream_gene_variant 0.67
aftB 4269179 c.-343C>A upstream_gene_variant 0.75
aftB 4269183 c.-347T>C upstream_gene_variant 0.75
aftB 4269186 c.-350C>G upstream_gene_variant 0.75
aftB 4269201 c.-365A>G upstream_gene_variant 0.75
aftB 4269206 c.-370C>T upstream_gene_variant 0.6
ubiA 4269220 p.Ala205Lys missense_variant 0.75
aftB 4269222 c.-386T>C upstream_gene_variant 0.75
aftB 4269242 c.-406C>T upstream_gene_variant 0.5
ubiA 4269243 p.His197Gln missense_variant 0.5
aftB 4269249 c.-413G>A upstream_gene_variant 0.43
whiB6 4338595 c.-75delG upstream_gene_variant 1.0
gid 4407588 c.615A>G synonymous_variant 1.0