EBG00000313339 - n.1772G>A
Drug resistance types
146 Sensitive
11 RR-TB
102 HR-TB
53 MDR-TB
11 Pre-XDR-TB
2 XDR-TB
183 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 7 |
| lineage4.1.1.3 | 9 |
| lineage4.9.1 | 2 |
| lineage4.9 | 213 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage2.2.1 | 30 |
| La1.7.1 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.7;lineage4.9 | 9 |
| La2;lineage4.9 | 2 |
| lineage2.2 | 4 |
| La1.6;La3;lineage4.9 | 1 |
| lineage4.1.2.1 | 16 |
| La3;lineage3 | 1 |
| lineage3 | 6 |
| La3;lineage4.9 | 8 |
| lineage4.1;lineage4.8 | 2 |
| lineage4.1;lineage4.9 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.8.1 | 3 |
| lineage4.8 | 7 |
| lineage4.6.2.2 | 2 |
| lineage4.3.3;lineage4.3.4.2 | 1 |
| lineage2.2.1.1 | 5 |
| lineage4 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.3.4.1 | 5 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 6 |
| M.canetti;lineage4.2 | 1 |
| La1.2.BCG | 2 |
| 15 | |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La1;lineage4.9 | 2 |
| lineage2.1 | 1 |
| lineage4.9;lineage6.3 | 8 |
| M.canetti;lineage2.2 | 2 |
| M.canetti;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.1;lineage4 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2.1;lineage4.9 | 5 |
| lineage4.8.1 | 1 |
| lineage4.3.2.1 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.9;lineage9 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| La3;lineage2.2.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.2.2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage3.1.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 2 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.8;lineage4.9 | 1 |
| La3;lineage4.8 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage6.1.1 | 2 |
| lineage3.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.9;lineage7 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1.2 | 4 |
| lineage4.3.4 | 1 |
| La1.6;lineage4 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;lineage2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage1;lineage4.9 | 1 |
| La3;lineage2.2.2 | 2 |
| lineage1.1.2 | 2 |
| lineage2.2.2;lineage4 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.4.1.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.5 | 2 |
| La1.7 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage6.3.1 | 1 |
| La2;lineage2.2 | 1 |
| lineage2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 508 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | ERR550637 | MDR-TB | lineage4.1.1.3 | None | ERR245758 | Other | lineage4.9.1 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR1172844 | Sensitive | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1173355 | Other | lineage4.9 | None | SRR28119741 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR1169194 | Other | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR1196677 | Other | lineage2.2 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1173218 | Other | lineage4.3.3 | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | SRR1181020 | Other | lineage2.2.1 | None | ERR176741 | Other | lineage4.9 | None | ERR1023302 | MDR-TB | La3;lineage3 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | SRR6046492 | Other | lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR11138607 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR1173384 | Other | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3797019 | Other | La1.8.1 | None | ERR12015085 | Other | lineage4.8 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR1034911 | MDR-TB | lineage4.3.3;lineage4.3.4.2 | pt | ERR970441 | RR-TB | lineage2.2.1.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR13285191 | Sensitive | lineage4.9 | None | ERR11465025 | Other | lineage4.1.1.3 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR926164 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1172234 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR28119843 | Sensitive | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR9786843 | Other | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | SRR1173166 | Sensitive | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR369159 | Sensitive | lineage4.9 | None | SRR1173153 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR3675502 | Sensitive | lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1173633 | Other | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR9896144 | Other | lineage3 | None | ERR11465351 | Sensitive | lineage4.1.2.1 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181251 | Other | lineage2.2.1 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR400345 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR8692887 | Other | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR29093909 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR11466174 | Other | lineage4.8 | None | SRR6046802 | Other | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR7535086 | Other | None | ERR926159 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR990545 | Other | lineage3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR4812155 | Other | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | SRR1175049 | Other | lineage4.8;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR12015083 | Other | La3;lineage4.8 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR11465360 | MDR-TB | lineage4.3.4.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR29016780 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR1180270 | Other | lineage2.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR4811493 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR8692905 | Sensitive | None | SRR1184381 | MDR-TB | None | SRR28351341 | Other | lineage4.1.1.1 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR1173118 | Other | lineage2.2.1 | None | SRR1181368 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1184372 | MDR-TB | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR6866807 | Other | lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR1173562 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR4769421 | Other | La1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1180345 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR11465597 | Sensitive | lineage4.1.2.1 | None | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | SRR21690362 | Other | lineage1.1.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | ERR13285192 | Sensitive | lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | SRR1173330 | Sensitive | lineage4.3.3;lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR11252736 | Other | lineage4.9 | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR2199988 | MDR-TB | lineage4.1.1.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR369158 | Other | lineage4.9 | None | SRR1175074 | Other | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR3797067 | Other | La1.8.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1196494 | MDR-TB | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR15368973 | Other | lineage4.9 | None | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR926160 | Sensitive | lineage4.9 | None | SRR29093099 | MDR-TB | La3;lineage2.2.2 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1173706 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR28119753 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR13245558 | MDR-TB | La3;lineage2.2.2 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1196546 | Other | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR926163 | Other | lineage4.9 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR9786619 | Sensitive | lineage4.8 | None | SRR29096659 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR1165699 | Other | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283010 | Sensitive | La1.8.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR6198317 | Other | La1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR4407452 | Other | lineage3 | None | ERR373947 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR6044835 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR23961549 | Other | La1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184294 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708416 | Sensitive | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR5341456 | Other | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR28351488 | MDR-TB | lineage2.2.1 | None | ERR987722 | MDR-TB | None | SRR1172857 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR12268496 | Sensitive | lineage4.4.1.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR1173363 | Other | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR1196566 | Other | lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR6045832 | Other | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4819241 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR12015084 | Other | lineage4.8 | None | ERR400529 | Other | lineage3 | None | ERR752229 | Other | lineage4.5 | None | SRR22249687 | Sensitive | lineage4.8 | None | SRR3675222 | Other | La1.7 | None | ERR3797029 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | ERR4811031 | Sensitive | lineage4.5 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | SRR28119823 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR1173788 | Sensitive | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None |
|---|
