Rv0006 - c.2022C>G


Drug resistance types
30 Sensitive 5 RR-TB 157 HR-TB 22 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 104 Other
lineage Counts
lineage Count
143
lineage4 35
lineage2.2.1 19
lineage4.1.2.1 17
lineage4.1.2 1
lineage4.9 29
lineage4.8 3
lineage4.3.2.1 1
lineage4.3.3 6
lineage4.3.4.2.1 5
lineage4.4.1.2 1
lineage3.1 4
lineage4.3.4.1 1
lineage2.2 4
La1 1
La1.8.1 3
lineage4.1.3 2
lineage4;lineage3.1 1
La1.2 2
lineage2 2
lineage3.1.2 1
lineage1.2.2.2 1
lineage3 4
lineage3.1.2.1 3
lineage4.6.1.1 1
lineage1.1.3.1 1
lineage4.5 2
lineage4.1.2.1.1 1
lineage4.3.2 2
lineage1.1.2 2
lineage4.6.2.2 3
lineage6 1
lineage6.1.3 2
lineage6.3.1 1
lineage2.2.2 1
lineage4.4.1.1 3
La1.7.1 1
lineage4.2;La1.7 1
lineage4.9;La3 1
lineage4.1.1 2
lineage3;lineage2.2.1 1
lineage4.1 1
lineage6.3;lineage2.2.1 1
lineage4.3.4 1
lineage3;lineage2.1 1
lineage1.2.1.1 1
lineage2.1 1
lineage4.1.1.3 2
lineage4;lineage1.1.2 1
lineage4.8;La3 1
lineage4.7 1
lineage4.9;lineage2.1 1
lineage1.1 1
spoligotype Counts
spoligotype Count
None 328
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5311099 HR-TB None
ERR502510 Sensitive lineage4 None
ERR502532 HR-TB None
ERR502908 HR-TB lineage2.2.1 None
ERR323036 HR-TB None
ERR5311081 HR-TB None
ERR5311090 HR-TB None
ERR323038 HR-TB None
SRR7496509 Other None
SRR7131023 Other lineage4.1.2.1 None
SRR9970980 Other lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
SRR7535086 Other None
SRR9971112 Other lineage2.2.1 None
SRR7585435 Other lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323041 HR-TB None
ERR323043 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323054 HR-TB lineage3.1 None
ERR323055 HR-TB None
ERR323066 Sensitive lineage4 None
ERR323063 HR-TB None
ERR11466499 Other lineage4.3.4.1 None
ERR323108 HR-TB lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR11465015 Sensitive lineage4.3.4.2.1 None
ERR1063855 Other lineage4 None
ERR1035157 Other lineage4.9 None
ERR1063839 HR-TB lineage2.2 None
ERR1023525 HR-TB lineage4 None
ERR1035122 Sensitive None
ERR1063857 HR-TB None
ERR1063896 Sensitive None
ERR137286 Sensitive lineage4 None
ERR3283025 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283017 HR-TB None
ERR3283021 HR-TB None
ERR3283010 Other La1 None
ERR3283030 HR-TB lineage4.9 None
ERR3283027 HR-TB None
ERR3283040 HR-TB None
ERR3283032 HR-TB None
ERR3283041 Other lineage4.9 None
ERR3468544 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283055 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3283036 HR-TB None
ERR373945 HR-TB lineage4 None
ERR363456 Sensitive lineage4 None
ERR3797015 HR-TB None
ERR3797016 HR-TB None
ERR3797036 HR-TB None
ERR3797046 HR-TB None
ERR3797073 HR-TB La1.8.1 None
ERR3797047 HR-TB lineage4 None
ERR3797069 Other None
ERR3797060 Other La1.8.1 None
ERR3797082 Other lineage4.9 None
ERR3797080 HR-TB lineage4.9 None
ERR3797083 HR-TB None
ERR3797086 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR387051 HR-TB None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR5336148 Other None
ERR4024991 Other None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR405209 Sensitive lineage4 None
ERR4769427 Other La1.2 None
ERR4188247 HR-TB None
ERR4407463 HR-TB None
ERR473323 HR-TB lineage4.9 None
ERR4188350 HR-TB None
ERR4769450 HR-TB None
ERR4769452 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4769521 HR-TB None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
ERR4796254 Sensitive lineage4 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4798099 Other None
ERR4797588 MDR-TB lineage3 None
ERR4798838 MDR-TB lineage3.1.2.1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4799378 Sensitive lineage4 None
ERR4800341 Other lineage3 None
ERR6359074 HR-TB lineage4.9 None
ERR5908228 Other lineage4.3.3 None
ERR6358837 HR-TB None
ERR6359070 Other lineage4.9 None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR4811493 HR-TB None
ERR6198317 Other La1.2 None
ERR6358755 Other lineage4.6.1.1 None
ERR6359045 HR-TB None
ERR6866410 Sensitive None
ERR6866022 Other None
ERR736834 Sensitive lineage4 None
ERR702406 HR-TB None
ERR6866639 Other None
ERR6866807 HR-TB lineage4 None
ERR736839 Other None
ERR736835 HR-TB None
ERR751326 Sensitive lineage4 None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR736848 HR-TB None
ERR736872 Sensitive lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR752229 Other lineage4.5 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR9117709 HR-TB None
ERR176549 Other lineage4.3.4.2.1 None
ERR8976043 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117805 Other lineage4.3.2 None
ERR9119096 Other lineage4.3.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9119669 HR-TB None
ERR9786601 Other lineage4.1.2.1 None
ERR9786604 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786645 Other lineage4.6.2.2 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9786843 Other None
ERR9787165 Other lineage6 None
ERR9787153 Other lineage6.1.3 None
ERR9787197 Other None
ERR9787139 Other lineage6.3.1 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
ERR9787256 Other lineage6.1.3 None
SRR10315567 Other lineage2.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1162740 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1158918 Sensitive lineage4 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1172857 MDR-TB None
SRR1169194 Other None
SRR1172234 Other None
SRR1173453 Other lineage4.4.1.1 None
SRR1172951 Other None
SRR1173153 HR-TB None
SRR1173166 Other lineage4.9 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173363 HR-TB None
SRR1173400 Other None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1173484 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1175049 RR-TB None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184388 Other None
SRR1184380 HR-TB None
SRR1184381 MDR-TB None
SRR1196566 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196546 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196768 MDR-TB None
SRR12142341 HR-TB None
SRR11972367 Sensitive lineage2.2.1 None
SRR12416824 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR13861532 Other lineage4.9 None
SRR13861304 Other lineage4.9 None
SRR13861424 RR-TB lineage4.9 None
SRR1640750 HR-TB None
SRR13861528 HR-TB lineage4.9 None
SRR13861586 Other lineage4.9 None
SRR13861629 RR-TB lineage4.9 None
SRR18213713 HR-TB lineage4.5 None
SRR1792478 HR-TB La1.7.1 None
SRR20969677 HR-TB lineage2 None
SRR19303884 HR-TB None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR23961559 Other lineage4.2;La1.7 None
SRR25827682 Other None
SRR22175232 MDR-TB lineage3.1.2.1 None
SRR26159043 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR26399490 Sensitive lineage4.9 None
SRR26399973 Other lineage4.9;La3 None
ERR176793 Other lineage4.1.1 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
SRR3675464 HR-TB lineage4.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR4815604 HR-TB None
SRR6325445 HR-TB None
SRR3675482 HR-TB None
ERR1035239 HR-TB None
SRR3675465 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
ERR4814352 HR-TB lineage2.2.1 None
ERR161033 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675486 HR-TB None
ERR4814734 Other lineage1.2.1.1 None
SRR3675221 HR-TB None
ERR181744 HR-TB None
SRR3675270 HR-TB None
SRR3675236 HR-TB None
ERR702405 Sensitive lineage2.1 None
SRR3675246 Sensitive lineage4 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675280 HR-TB lineage4.9 None
SRR3675311 Other None
SRR3675284 HR-TB lineage4.9 None
SRR3675312 HR-TB lineage4 None
SRR3675456 HR-TB None
SRR3675383 HR-TB None
ERR4815752 Other lineage4.9 None
ERR4816999 Other None
ERR2229542 Other lineage4.8 None
ERR212034 HR-TB None
ERR2027263 Other lineage4 None
SRR3675545 HR-TB None
SRR3675555 HR-TB None
SRR3675558 HR-TB None
ERR4817060 RR-TB None
ERR212138 HR-TB lineage4 None
ERR212123 Other None
SRR3675572 Other None
SRR3675574 HR-TB None
ERR4816585 Other lineage2.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3742665 HR-TB None
ERR4816656 HR-TB None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4817893 Other lineage4.8;La3 None
ERR4818929 HR-TB None
ERR2509673 Other lineage2.2.1 None
SRR5341400 HR-TB lineage4 None
ERR502912 Other lineage2.2.1 None
ERR4817735 Other lineage4.8 None
ERR4817896 HR-TB lineage2.2.1 None
SRR7496472 Other None
ERR4818021 Other La1.8.1 None
ERR234659 HR-TB None
ERR2229143 Other lineage4.1.1 None
ERR4818615 Other None
SRR5341373 HR-TB lineage4 None
SRR5341387 Other lineage4 None
SRR5341302 HR-TB None
SRR5341432 HR-TB lineage4 None
ERR2514692 Other None
ERR4819781 Other lineage2.2.1 None
ERR4819839 Sensitive lineage1.1.2 None
ERR4819933 Other lineage4.9 None
ERR2514821 Other lineage2.2.1 None
ERR4819932 Other lineage4.7 None
ERR2693238 HR-TB lineage4.9 None
SRR5341333 HR-TB None
SRR5341330 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
ERR4821053 Other lineage3 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2693239 HR-TB None
SRR6045526 HR-TB None
SRR6045503 HR-TB None
SRR6046133 HR-TB None
SRR6045519 HR-TB None
SRR6045555 HR-TB None
SRR5535933 HR-TB None
ERR278594 HR-TB None
SRR6045952 HR-TB None
SRR6044790 HR-TB None
SRR6045892 Sensitive None
SRR6044855 Other lineage4.9 None
SRR6045053 Other None
SRR6046046 Other None
SRR6046225 HR-TB None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
SRR6325444 HR-TB None
SRR6046253 HR-TB lineage4.9 None
SRR6046305 Other lineage4.9 None
SRR6046382 HR-TB lineage2.2.1 None
SRR6325448 HR-TB None
SRR6046492 Other None
ERR4798112 MDR-TB lineage3.1.2.1 in
SRR6046514 HR-TB None
SRR6325447 HR-TB None
SRR6046540 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046878 HR-TB lineage4 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR323034 HR-TB lineage3.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6511621 HR-TB None
SRR6325442 HR-TB None
ERR3077978 Other lineage1.1 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4831117 HR-TB None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR11466242 Sensitive lineage4.1.1.3 None
ERR294248 HR-TB None
SRR6785267 Other lineage2.2.1 None
SRR6789626 Other None