Rv0668 - c.72C>T


Drug resistance types
28 Sensitive 7 RR-TB 61 HR-TB 25 MDR-TB 8 Pre-XDR-TB 4 XDR-TB 211 Other
lineage Counts
lineage Count
La1.2.BCG 2
lineage4.9 81
lineage4.6.3;lineage4.9 2
La1.7;lineage4.9 2
lineage5.2 2
26
lineage2.1;lineage4.9;lineage6.3 11
lineage2.2.2;lineage4 1
lineage2.2.1 19
lineage2.1 5
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 14
lineage1.1.1 2
lineage4.9;lineage6.3 10
lineage4.3.3 5
lineage4.9;lineage6.1.3 1
lineage4.1.2.1 13
La1.2.BCG;La1.8.1 1
lineage3.1;lineage9 1
lineage4.8 11
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage6.1.1 2
lineage3.1.2.1;lineage3.1.2.2 1
M.canetti;lineage4.9;lineage9 1
La3;lineage2.1;lineage4.9 3
La3;lineage2 1
lineage6.3.1 1
La3;lineage2.2.1 2
lineage1.1.2 1
lineage2.1;lineage6.3 2
La3;lineage4.9 8
lineage3 7
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 3
lineage4 2
lineage2.2.1;lineage6.3 1
lineage4.2.2.2 1
lineage4.6.2.2 5
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage1.1.3.2 1
La2;lineage4.9;lineage9 1
lineage4.1.3 2
lineage4.3.4.1 2
lineage4.8.1 1
lineage3.1 1
lineage2.2.1.1 4
lineage4.3.4.2.1 3
lineage4.1;lineage4.8 2
lineage1.2.1.2 1
M.canetti;lineage2.2 2
lineage4.2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage6.2.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.3.1;lineage4.9;lineage6 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage1.1;lineage4 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage3 1
lineage2.2.1;lineage3 1
lineage4.9;lineage9 3
lineage3.1.2.2 1
M.canetti;lineage1 1
lineage3.1.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.1.1 3
La3 2
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.1;lineage4.1.2.1 1
lineage4.4.1.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
lineage6.1.3 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.1.3 1
lineage2.2 2
M.canetti;lineage2.1;lineage4.9 2
lineage4.9.1 1
lineage4.7 1
La3;lineage1.1.2 1
La2;lineage4.9 1
La1.6;La3;lineage4.9 2
La3;lineage2.2.2 1
lineage2.2.2 1
lineage1.2.2.2 2
lineage4.3.2 1
lineage4.2.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7;lineage4.2 1
spoligotype Counts
spoligotype Count
None 344
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1915487 Other La1.2.BCG None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
ERR2514692 Other None
SRR25827682 Other None
SRR1172857 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR502908 HR-TB lineage2.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6785227 Other lineage2.2.1 None
SRR1173633 Other lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR1173363 Other None
SRR3675572 Other None
SRR3675457 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR21690362 Other lineage1.1.1 None
SRR6045503 Sensitive lineage4.9 None
ERR4818615 Sensitive None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR29051093 Other lineage4.9 None
SRR29051043 Other lineage4.3.3 None
ERR3283042 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR9786694 Other lineage4.1.2.1 None
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR12015084 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR9787139 Other lineage6.3.1 None
SRR1710057 Other lineage2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR3797069 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR926162 Sensitive lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816999 Other None
ERR2513470 Other lineage4.2.2.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR11081258 Other lineage4.8 None
ERR4800341 Other lineage3 None
ERR4816466 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR702406 Other lineage2.1 None
SRR3675549 Other lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
SRR7496509 Other None
SRR26937107 MDR-TB lineage2.2.1 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR7496472 Other lineage4.9 None
SRR29097066 Sensitive lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR1173118 Other lineage2.2.1 None
SRR28044634 Other lineage3 None
ERR987722 MDR-TB None
SRR6789621 Other lineage4.9 None
SRR1173153 Other lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR2514821 Sensitive lineage2.2.1 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1184372 MDR-TB None
SRR12006550 Sensitive lineage1.2.1.2 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR17832802 HR-TB lineage3 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR29050928 Other lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096541 Other lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR9787061 Sensitive lineage6.2.3 None
ERR3797029 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR18213713 HR-TB None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR29772570 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR5535933 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1173218 Other lineage4.3.3 None
SRR1181020 Other lineage2.2.1 None
ERR1023302 MDR-TB La3;lineage3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR4815604 Other None
ERR926160 Sensitive lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR1173384 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4797588 MDR-TB lineage3 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675248 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR9786515 Other lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR29096150 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR9786443 Sensitive lineage4.8 None
ERR990545 Other lineage3 None
SRR1165699 Other lineage4.9 None
SRR7535086 Other None
SRR1172728 RR-TB La3 None
SRR1181091 Other lineage2.2.1.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1172817 Other La3 None
SRR1180172 Other lineage2.2.1 None
SRR1172234 Other lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR29050859 Other lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR3675311 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1183144 Other lineage2.2.1 None
SRR1184294 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR6045233 Other M.canetti;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR14066533 Sensitive lineage1.1.1 None
ERR6359070 Sensitive lineage4.9 None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
ERR212001 HR-TB None
ERR212033 Other lineage4.9 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR28119752 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR6046305 Sensitive lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR6785413 Other lineage2.2.1 None
ERR926155 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
SRR1172951 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29097026 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR2514327 HR-TB lineage4.8 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1175074 Other None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR245758 Other lineage4.9.1 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1173355 Other lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
SRR1196677 Other lineage2.2 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR736848 Other lineage4.9 None
ERR2229084 Sensitive lineage4.8 dk
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR108125 RR-TB lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1035157 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR26159043 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
SRR6789626 Other None
ERR9786617 Other lineage4.1.1.1 None
ERR926158 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR926161 Sensitive lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4820854 Other lineage4.1.2.1 None
ERR926163 Other lineage4.9 None
ERR9117805 Other lineage4.3.2 None
SRR6785268 Sensitive lineage4.2.1 None
ERR3283032 Other lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR11049020 Other lineage4.8 None
ERR4797201 Other lineage1.2.2.2 None
ERR971389 Sensitive lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR176643 Other La3;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR9117709 Other None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR176751 Other lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR1183111 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR23961559 Other La1.7;lineage4.2 None
ERR7821163 Other lineage2.2.1 None
ERR3283018 HR-TB lineage4.9 None