Rv1630 - c.558C>G


Drug resistance types
83 Sensitive 31 RR-TB 115 HR-TB 37 MDR-TB 14 Pre-XDR-TB 0 XDR-TB 157 Other
lineage Counts
lineage Count
lineage4.9 99
lineage4.1.1 2
136
lineage4 37
lineage2.2.1 30
lineage2.1 2
lineage4.1.2.1 15
lineage4.3.4.2.1 3
lineage4.8 18
lineage3 16
lineage4;lineage2 1
lineage2.2 5
lineage1.1.2 3
lineage4.6.1.2 5
lineage4.5 4
lineage4.1.1.3 2
lineage4.1;lineage1 1
lineage4.8;La3 1
lineage4.1 2
La1.8.1 5
lineage4.9.1 1
lineage4.2.2.2 1
lineage5.1.4 1
lineage1.1.1 1
lineage4.3.3 2
lineage4.1.1.3.1;lineage3.1.2 1
lineage4.7 3
lineage4.9;lineage4.2.1 1
lineage4.4.1.1 3
lineage4.2.1 3
lineage4.4.1.2 1
lineage4.8.1 1
La1.7.X-unk4 1
lineage4.6.2.2 3
lineage4.1.3 2
La1.2 1
lineage4;lineage3.1 1
lineage4.9;La1.3 1
lineage1.2.2.2 1
La1.3 1
lineage2 4
La1 1
lineage4.6.1.1 1
lineage4.5;lineage2.2.1 1
lineage1.1.1.1 1
lineage5.1.1 1
lineage4.3.2 1
lineage4.3.4.1;lineage4.3.3 1
lineage6.3.1 1
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.9;lineage2.2 1
lineage4.4.1.1.1 1
lineage3.1 2
lineage4.4 1
lineage7;lineage2.2.1.2 1
lineage3.1.3 1
spoligotype Counts
spoligotype Count
None 437
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675477 Other lineage4.9 None
ERR176793 Other lineage4.1.1 None
SRR3675465 HR-TB None
SRR3675229 Other lineage4 None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675488 HR-TB None
SRR3416776 Other lineage2.1 None
ERR4814639 HR-TB lineage4 None
SRR3675210 Sensitive lineage4.9 None
SRR3675221 HR-TB None
SRR3675222 Other None
ERR3275450 Other lineage4 None
SRR3675236 HR-TB None
SRR3675279 Other None
ERR1750907 RR-TB None
SRR3675234 Other None
SRR3675232 Other lineage4.1.2.1 None
SRR3675247 Other lineage4.9 None
SRR3675501 HR-TB None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675311 Other None
SRR3675283 Sensitive lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR3675387 Sensitive None
ERR2228965 Other lineage4.8 None
ERR2229084 Sensitive lineage4.8 dk
SAMEA3501015 Other lineage4.8 None
ERR2229542 Other lineage4.8 None
SRR3675514 Sensitive lineage4.9 None
SRR3675522 Other None
SRR3675542 Other lineage4.9 None
ERR4816999 Other None
SRR3675541 Sensitive lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR2027263 Other lineage4 None
SRR3675553 Sensitive lineage4.9 None
SRR3675571 HR-TB None
ERR4817060 RR-TB None
ERR212121 HR-TB None
ERR4816466 HR-TB None
SRR3675572 Other None
SRR3675577 Sensitive lineage4.9 None
SRR3675574 HR-TB None
ERR4816470 Other lineage3 None
SRR3742665 HR-TB None
ERR4816550 Sensitive lineage4.9 None
ERR4816762 Other lineage4;lineage2 None
ERR4816585 Other lineage2.2 None
ERR2228838 RR-TB lineage4.8 None
ERR2228810 RR-TB lineage4 None
SRR7898221 MDR-TB lineage1.1.2 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR2228900 RR-TB lineage4.8 None
ERR2228890 Other lineage4 None
ERR4815816 Other lineage4.5 gb
ERR2228899 RR-TB lineage4.8 None
ERR4815815 Sensitive lineage4 None
ERR2228910 Other lineage4.8 None
ERR4817667 HR-TB lineage4.8 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR4819068 Sensitive lineage4.1;lineage1 None
ERR4817893 Other lineage4.8;La3 None
ERR4817896 HR-TB lineage2.2.1 None
SRR7496472 Other None
ERR4817915 RR-TB lineage4.9 None
ERR2446566 Other lineage4.1 None
ERR4818021 Other La1.8.1 None
ERR234659 HR-TB None
ERR2512423 Other lineage4.1.1.3 None
SAMEA3501063 RR-TB lineage4.8 None
ERR245675 Sensitive lineage1.1.2 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR245758 Other lineage4.9.1 None
ERR4818561 HR-TB lineage4 None
ERR2513470 Other lineage4.2.2.2 None
ERR2513283 Other lineage5.1.4 None
ERR4819546 HR-TB lineage3 None
SRR5007188 Other lineage4 None
ERR4818615 Other None
ERR4820854 Other lineage4.1.2.1 None
ERR4819314 Other lineage1.1.1 None
ERR4819383 RR-TB lineage4.9 None
ERR4818624 Other lineage4.3.4.2.1 None
SAMEA3501067 RR-TB lineage4.8 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4820369 Other lineage2.2.1 None
ERR1023509 Other None
ERR1035138 MDR-TB None
SRR5341437 Sensitive lineage4.9 None
ERR2514552 Sensitive lineage3 None
ERR2514430 Other lineage4.1.1.3.1;lineage3.1.2 None
SRR5341456 Other None
SRR5341296 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR2514692 Other None
ERR4819863 RR-TB lineage4.9 None
SRR5341302 HR-TB None
SAMEA3501070 RR-TB lineage4.8 None
ERR2514821 Other lineage2.2.1 None
SRR6045526 HR-TB None
ERR2446382 Other lineage4 None
ERR4819932 Other lineage4.7 None
SRR5341323 Sensitive lineage4 None
ERR2515007 Other lineage3 None
SRR5341333 HR-TB None
SRR5341345 Sensitive lineage4.9 None
ERR2693231 Other None
SAMEA3501046 RR-TB lineage4.8 None
ERR2693230 Other None
ERR2693257 Other None
ERR4820030 Other lineage4.9 None
SRR5341330 HR-TB None
SAMEA3501052 RR-TB lineage4.8 None
SRR5431730 Other La1.8.1 None
ERR2693254 Other None
SRR6045795 HR-TB lineage2.2.1 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR6045555 HR-TB None
SRR6046141 Other lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR6046362 HR-TB None
SRR6044819 Sensitive lineage4.9 None
SRR6044838 Other lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6045233 HR-TB None
SRR6045327 HR-TB None
SRR6046066 HR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6045399 Other None
SRR6046225 HR-TB None
SRR6046245 Other lineage4.9 None
SRR6046305 Other lineage4.9 None
SRR6046299 HR-TB None
SRR6046133 HR-TB None
SRR6044790 HR-TB None
SRR6044835 Sensitive lineage4 None
SRR6044855 Other lineage4.9 None
SRR6046397 Other None
SRR6046376 Other lineage3 None
SRR6046482 HR-TB None
ERR4830353 Other None
SRR6046460 HR-TB None
SRR6046492 Other None
ERR502474 Pre-XDR-TB lineage4.9 None
SRR6046540 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046611 HR-TB lineage4.9 None
SRR6046839 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR502473 Pre-XDR-TB lineage4.9 None
SRR6397815 Other lineage4.4.1.1 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR502478 RR-TB lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
ERR502479 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4831638 Sensitive None
SRR6785262 Sensitive lineage4.2.1 None
SRR6785263 Sensitive lineage2.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR6789626 Other None
ERR502532 HR-TB None
ERR502943 HR-TB None
SRR7496509 Other None
SRR7496471 Sensitive None
SRR7535086 Other None
SRR7496517 Other None
SRR7496523 Other lineage4.7 None
ERR019855 Other lineage3 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645971 Other lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR017781 Other lineage3 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323043 HR-TB None
ERR3283013 MDR-TB lineage4 None
ERR1034652 Other None
ERR067712 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1035157 Other lineage4.9 None
ERR3283014 HR-TB None
ERR3283024 Other None
ERR3283028 Other None
ERR3283040 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283027 HR-TB None
ERR3283032 HR-TB None
ERR3283031 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3283043 Other lineage4.9 None
ERR3283036 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3445487 Other La1.7.X-unk4 None
ERR3445504 HR-TB None
ERR3797014 Other None
ERR3797015 HR-TB None
ERR3797017 Other None
ERR3797043 HR-TB None
ERR3797044 Other None
ERR3797036 HR-TB None
ERR3797048 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3797058 Other lineage4.9 None
ERR3797065 MDR-TB lineage4 None
ERR3797061 Other None
ERR3797063 HR-TB None
ERR3797069 Other None
ERR3797080 HR-TB lineage4.9 None
ERR3797073 HR-TB La1.8.1 None
ERR3797087 Sensitive lineage4 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400320 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR4769530 RR-TB lineage4.9 None
ERR400345 Other lineage4 None
ERR400529 Other lineage3 None
ERR4596902 HR-TB lineage3 None
ERR4596910 Sensitive lineage4 None
ERR473332 Other lineage4 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769497 HR-TB La1.2 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4188247 HR-TB None
ERR4407463 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4769502 RR-TB lineage4.9;La1.3 None
ERR4769508 RR-TB lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4769555 Other La1.3 None
ERR4796577 MDR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797313 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4797588 MDR-TB lineage3 None
ERR4798262 HR-TB La1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4800341 Other lineage3 None
ERR6358755 Other lineage4.6.1.1 None
ERR4810741 HR-TB None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR4811030 Sensitive None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR4812155 Sensitive None
ERR5987263 MDR-TB lineage2.2.1 None
ERR4811022 HR-TB None
ERR4811031 Sensitive lineage4.5 None
ERR5336148 Other None
ERR736837 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6358991 HR-TB None
ERR6359045 HR-TB None
ERR702406 HR-TB None
ERR736867 HR-TB None
ERR736848 HR-TB None
ERR752012 HR-TB lineage1.1.1.1 None
ERR736874 HR-TB None
ERR751345 Other lineage5.1.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9117721 HR-TB lineage1.1.2 None
ERR752229 Other lineage4.5 None
ERR7821163 Other lineage2.2.1 None
ERR9117709 HR-TB None
ERR9117805 Other lineage4.3.2 None
ERR9786604 Other None
ERR9786076 Sensitive lineage3 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786508 Sensitive lineage4.3.4.1;lineage4.3.3 None
ERR9786569 Other lineage4.8 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786617 Other lineage4.1.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR10272570 Sensitive lineage4.4.1.1 None
ERR9786671 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787197 Other None
ERR987707 MDR-TB lineage4.7 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049672 Other lineage3 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1140736 RR-TB None
SRR1172807 Sensitive lineage4.9 None
SRR1062928 RR-TB lineage4 None
SRR11462861 Other La1.8.1 None
SRR1169194 Other None
SRR1172234 Other None
SRR1172717 Other lineage4.9 None
SRR1172728 MDR-TB None
SRR1172817 HR-TB None
SRR1172987 HR-TB lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1172951 Other None
SRR1172857 MDR-TB None
SRR1173166 Other lineage4.9 None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR1173384 Other lineage4 None
SRR1173281 RR-TB lineage3 None
SRR1173363 HR-TB None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173629 Other None
SRR1173400 Other None
SRR1173484 Other lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173706 Other lineage4.9 None
SRR1173788 Other None
SRR1173778 Other None
SRR1173740 Other None
SRR1175049 RR-TB None
SRR1175500 MDR-TB lineage4 None
SRR1175074 MDR-TB None
SRR1175487 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR1175474 HR-TB lineage4.9 None
SRR1175472 MDR-TB lineage4 None
SRR1175491 MDR-TB lineage4 None
SRR1175496 HR-TB lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1175512 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180420 Sensitive lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181325 Sensitive lineage4.9 None
SRR1184294 HR-TB None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1184346 HR-TB lineage3.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184380 HR-TB None
SRR1184381 MDR-TB None
SRR1196677 HR-TB lineage2 None
SRR1184388 Other None
SRR1196546 HR-TB None
SRR1196566 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR1196768 MDR-TB None
SRR16627752 RR-TB lineage4.4 None
SRR12142339 HR-TB lineage2.2.1 None
SRR12142341 HR-TB None
SRR12416824 HR-TB None
SRR13837709 Sensitive lineage4.9 None
SRR15368973 Other None
SRR11972417 MDR-TB lineage2.2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR17658565 Other lineage3 None
SRR1710057 Other lineage2.1 None
SRR18003019 Other lineage2.2.1 None
SRR20969677 HR-TB lineage2 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR18213713 HR-TB lineage4.5 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR18910194 HR-TB lineage2.2 None
SRR18913742 Sensitive lineage3.1.3 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR12708416 Sensitive lineage4.1 None
ERR11081258 Other lineage4.8 None
SRR8692812 Other lineage4.9 None
SRR8692825 Other lineage4.9 None
SRR8692807 Other lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
ERR4815604 HR-TB None
SRR8692887 Other None
SRR3675455 Sensitive lineage4 None
SRR3675473 Sensitive lineage4.9 None