Rv0682 - c.279G>C


Drug resistance types
71 Sensitive 9 RR-TB 56 HR-TB 31 MDR-TB 12 Pre-XDR-TB 4 XDR-TB 212 Other
lineage Counts
lineage Count
lineage4.8 8
lineage4.9;lineage6.3 7
lineage4.3.3 5
lineage2.1;lineage4.9 14
La3;M.canetti;lineage2.2.1 1
lineage4.1.1.3 6
La3;lineage2.1;lineage4.9 3
lineage4.9 133
lineage4.7 2
lineage2.1;lineage6.3 2
lineage4.1.2 2
La3;lineage2.1;lineage4.9;lineage6.3 4
La1.8.1 1
lineage4.6.5 2
lineage3 9
lineage2.2 2
lineage2.2.1 29
lineage4.3.4.2.1 5
La3;lineage2.2.2 1
lineage4.1.2.1.1 1
lineage1.2.1.1 1
lineage6.1.3 3
M.canetti;lineage4.9 3
lineage2.2.1;lineage3 1
La3;lineage4.9 8
lineage4.2.2.2 1
lineage4.1.1.1 4
La1;lineage2;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.3.2.1 1
lineage4.9;lineage9 1
La1;lineage4.9 2
lineage4 4
25
lineage2.1;lineage4.9;lineage6.3 10
lineage4.1.3 2
lineage2.2.1;lineage3;lineage4 1
La3 2
lineage4.6.2.2 6
M.canetti;lineage2.1;lineage4.9 2
lineage1.1.3.1 1
La1;lineage4.1.2 1
lineage4.1.2.1 12
La1.2.BCG 2
lineage4.6.3;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.8;lineage4.9 2
lineage4.1;lineage4.8 2
La1.6;lineage4 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
lineage6.3.1 1
La3;lineage2 1
La3;lineage2.2.1 2
lineage1.1.2 3
lineage1.1;lineage4 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage6.3 1
lineage4.5 1
lineage4.6.1.2 3
lineage3.1.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.3.2 1
lineage1.2.2.2 1
lineage2.1 5
lineage4.3.4.1 2
La3;lineage4.8 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage5.2 2
lineage2.2.2;lineage4 1
lineage1.2.1.2 1
lineage4.1 1
M.canetti;lineage2.2 2
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage6.3 1
La3;lineage1.1.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.2 1
lineage4.1.1.2 1
M.canetti;lineage1 1
La1.2.BCG;lineage4.9 1
lineage1.1.3.2 1
lineage4.2.1 1
lineage4.8.1 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.4.1.1 1
lineage3.1.3 1
lineage1.1.1 1
La1.7;lineage4.9;lineage6 1
spoligotype Counts
spoligotype Count
None 395
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2514327 HR-TB lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR2199988 MDR-TB lineage4.1.1.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1791747 Other La1.8.1 None
ERR6358979 Other lineage4.9 None
ERR7801175 HR-TB lineage4.6.5 None
ERR4821276 Sensitive lineage3 None
SRR1196677 Other lineage2.2 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR702405 Sensitive lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
SRR1184312 Other lineage2.2.1 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR4814734 Other lineage1.2.1.1 None
SRR15368973 Other lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR502510 Sensitive lineage4.9 None
SRR1173384 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR9786617 Other lineage4.1.1.1 None
ERR926158 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3797043 Sensitive lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR10808805 Other La1;lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR751326 Other lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR1172885 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
SRR1172728 RR-TB La3 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR1172817 Other La3 None
SRR6785527 Sensitive lineage2.2.1 None
SRR3675246 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR9786445 Other lineage4.8 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4407452 Other lineage3 None
SRR8758877 MDR-TB lineage4.1.1.1 None
ERR736834 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341299 HR-TB lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
SRR1915487 Other La1.2.BCG None
SRR7131023 Other lineage4.1.2.1 None
SRR1183965 Sensitive lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1173118 Other lineage2.2.1 None
ERR11252612 Other La3;lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR25827682 Other None
SRR1172857 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR245716 Sensitive lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR7496523 Other lineage4.7 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR6785413 Other lineage2.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
SRR1158918 Sensitive lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR137286 Other lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675275 Other lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR1173788 Sensitive lineage4.9 None
SRR29772570 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4817735 Other lineage4.8 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR7496517 Other None
ERR7801176 RR-TB lineage4.6.5 None
SRR10315466 RR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR6866410 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR29096935 Sensitive lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR736848 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR3675235 Sensitive lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR14801749 HR-TB lineage4.9 None
ERR4816999 Other None
SRR26159043 Other lineage4.9 None
ERR12015085 Other lineage4.8 None
SRR6789626 Other None
SRR29016901 Other La3;lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR10315567 HR-TB lineage2.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675248 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR926163 Other lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR926159 Sensitive lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR1165699 Other lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
ERR11049020 Other lineage4.8 None
SRR7535086 Other None
ERR4797201 Other lineage1.2.2.2 None
ERR926154 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR702406 Other lineage2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675549 Other lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
ERR4797193 HR-TB lineage1.1.2 None
SRR7496509 Other None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR12015083 Other La3;lineage4.8 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR29096873 Sensitive lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341298 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786843 Other None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR3675221 Other lineage4.9 None
SRR28044634 Other lineage3 None
ERR2514692 Other None
SRR28351339 MDR-TB lineage4 None
SRR6789621 Other lineage4.9 None
ERR4817060 Other None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR502908 HR-TB lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR926156 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR2514821 Sensitive lineage2.2.1 None
ERR4797474 Sensitive lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR1184372 MDR-TB None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR1173633 Other lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675457 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR3675232 Other lineage4.1.2.1 None
SRR29050928 Other lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
SRR29096541 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1173778 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR12015084 Other lineage4.8 None
ERR323066 Sensitive lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1180440 Other lineage4.9 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1710057 Other lineage2.1 None
ERR502511 Sensitive lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
ERR3797069 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR18003019 Other lineage2.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR1173355 Other lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815604 Other None
ERR736856 Sensitive lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4816852 Other lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR4797588 MDR-TB lineage3 None
SRR15014655 Other M.canetti;lineage1 None
SRR10808399 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR6511621 Sensitive lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR7821123 Other lineage1.1.3.2 None
SRR6785268 Sensitive lineage4.2.1 None
ERR3283044 Other lineage4 None
ERR990545 Other lineage3 None
ERR4872094 MDR-TB lineage5.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4800341 Other lineage3 None
SRR5341453 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR12416842 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
ERR9117709 Other None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172234 Other lineage4.9 None
ERR176751 Other lineage4.9 None
SRR1184329 Other lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR9787153 Other lineage6.1.3 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR779852 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1173185 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675311 Other lineage4.9 None
ERR7821163 Other lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1196478 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR2513121 Sensitive lineage3.1.3 None
ERR3804155 Other lineage4.1.2.1 None
SRR5341469 HR-TB lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
ERR212001 HR-TB None
ERR212033 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1181256 Other lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR6046305 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR6785227 Other lineage2.2.1 None
ERR926165 Sensitive lineage4.9 None
SRR3675572 Other None
ERR4818347 Other lineage4.1.2 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR29051093 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR29016780 Other lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR1173562 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR6785267 Other lineage2.2.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4817893 Other La3;lineage4.8 None