Rv0682 - c.279G>C


Drug resistance types
60 Sensitive 14 RR-TB 79 HR-TB 43 MDR-TB 20 Pre-XDR-TB 1 XDR-TB 160 Other
lineage Counts
lineage Count
lineage4.8 12
lineage4.3.3 6
lineage4.9 43
lineage4.9;La3 1
lineage2.2.1;La3 1
100
lineage4.1.1.1 1
lineage6.3;lineage2.2.1 1
lineage3;lineage2.2.1 1
lineage4;lineage3;lineage2.2.1 1
lineage4.1.1.3 3
lineage4.1.1 2
lineage2.2.1 36
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.3.4.2.1 5
lineage2.1 4
lineage1.2.1.1 1
lineage4.1.2.1 14
lineage4 53
lineage4.3 1
lineage4.6.1.2 4
lineage4.4.1.1 3
lineage4.5 2
lineage2.2 6
lineage4.8;La3 2
La1.8.1 4
lineage3.1.3 1
lineage4.1.1.2 1
lineage4.1.2 3
lineage4.2.2.2 1
lineage4;lineage1.1 1
lineage3 8
lineage4.6.2.2 7
lineage4.7 2
lineage1.1.2 4
lineage4.9;lineage2.1 1
lineage4.1.2.1.1 1
lineage5.2 2
lineage2.2.1.1 1
lineage4.2.1 2
lineage4.3.2.1 1
lineage4.3.4.1 2
lineage4.3.4 1
La1.7.X-unk4 1
lineage2 3
lineage4.1.3 2
lineage4.9;La1.3 2
lineage1.2.2.2 1
La1 1
lineage1.1.3.2 2
lineage4.6.1.1 1
lineage4.6.5 2
lineage2.2.2 1
lineage1.1.3.1 1
lineage6.1.3 2
lineage4.1 1
lineage4.3.2 1
lineage4.8;lineage4.1 2
lineage6 1
lineage6.3.1 1
La3 1
lineage3.1 2
lineage1.2.1.2 1
lineage1.1.1 1
spoligotype Counts
spoligotype Count
None 377
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11081257 Other lineage4.8 None
ERR11081258 Other lineage4.8 None
SRR21732980 Other lineage4.3.3 None
SRR26159043 Other lineage4.9 None
SRR26399973 Other lineage4.9;La3 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
ERR4815604 HR-TB None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
SRR25827605 Pre-XDR-TB lineage4;lineage3;lineage2.2.1 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR176793 Other lineage4.1.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3675465 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4814352 HR-TB lineage2.2.1 None
ERR161034 Other lineage4.3.4.2.1 None
SRR3416776 Other lineage2.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3675221 HR-TB None
SRR3675236 HR-TB None
ERR4814734 Other lineage1.2.1.1 None
SRR3675232 Other lineage4.1.2.1 None
ERR702405 Sensitive lineage2.1 None
SRR3675246 Sensitive lineage4 None
ERR176568 Other lineage4.3 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR4815550 Other lineage4 None
ERR176643 HR-TB None
SRR3675311 Other None
ERR4814976 Other lineage4.9 None
ERR176751 HR-TB None
ERR4815752 Other lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR2027263 Other lineage4 None
ERR4816999 Other None
ERR4817060 RR-TB None
ERR4817037 Other lineage4.9 None
ERR4816151 Other lineage4.8 None
ERR212001 HR-TB None
ERR212033 HR-TB None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR3675572 Other None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3742665 HR-TB None
ERR502912 Other lineage2.2.1 None
ERR4816852 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
SRR3675574 HR-TB None
ERR4816548 MDR-TB lineage4.5 None
SRR5341384 Sensitive lineage4.9 None
ERR4816585 Other lineage2.2 None
ERR4817204 RR-TB lineage4.9 None
ERR4817310 Other lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4817893 Other lineage4.8;La3 None
SRR7496472 Other None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4818021 Other La1.8.1 None
ERR234659 HR-TB None
ERR2513121 Sensitive lineage3.1.3 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4818252 Other lineage4.1.1.2 None
ERR245716 Sensitive lineage2.2.1 None
SRR5007188 Other lineage4 None
SRR5341453 Sensitive None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818347 Other lineage4.1.2 None
ERR4818394 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR4818615 Other None
SRR5341387 Other lineage4 None
ERR4820854 Other lineage4.1.2.1 None
ERR4819280 Sensitive lineage4 None
SRR5341425 Other lineage4 None
ERR4819322 Other lineage4;lineage1.1 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341396 Other lineage4 None
ERR2514327 HR-TB lineage4.8 None
ERR4820335 Other lineage4.1.2.1 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR5341455 Sensitive lineage4 None
ERR4819781 Other lineage2.2.1 None
SRR5341298 Sensitive lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341300 Other lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR2514692 Other None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341302 HR-TB None
ERR2514821 Other lineage2.2.1 None
ERR4819910 Other lineage4.9 None
SRR5341467 Other lineage4 None
ERR4819932 Other lineage4.7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341461 Sensitive lineage4 None
SRR5341366 Sensitive lineage4 None
SRR5341310 Other lineage1.1.2 None
SRR5341332 Pre-XDR-TB lineage3 None
SRR5341333 HR-TB None
SRR5341469 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR6045892 Sensitive None
ERR4821057 HR-TB lineage4 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR6045526 HR-TB None
ERR4821276 Other lineage3 None
ERR2693227 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6044952 RR-TB lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6046066 HR-TB None
SRR6045002 MDR-TB lineage4.9 None
SRR6045233 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6045327 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046541 Other lineage4.9 None
SRR6046540 HR-TB None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
SRR6511621 HR-TB None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831546 HR-TB lineage2.2 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR6785227 Other lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR6785268 Sensitive lineage4.2.1 None
SRR6785262 Sensitive lineage4.2.1 None
SRR6785413 Other lineage2.2.1 None
SRR6785267 Other lineage2.2.1 None
SRR6785527 Sensitive lineage2.2.1 None
SRR6789626 Other None
ERR502510 Sensitive lineage4 None
SRR7496517 Other None
ERR502908 HR-TB lineage2.2.1 None
ERR502532 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR7496523 Other lineage4.7 None
SRR7535086 Other None
SRR9970980 Other lineage4.1.2 None
SRR7535082 Sensitive lineage4 None
SRR7585435 Other lineage4.9 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR9971113 Other lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
ERR323066 Sensitive lineage4 None
ERR323043 HR-TB None
ERR11466499 Other lineage4.3.4.1 None
ERR1035122 Sensitive None
ERR323085 Sensitive lineage4 None
ERR323107 Other lineage4 None
ERR067699 HR-TB lineage4 None
ERR11465025 Other lineage4.1.1.3 None
ERR1063883 Sensitive lineage4 None
ERR1035157 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR11049020 Other lineage4.8 None
ERR1063896 Sensitive None
ERR10796631 Other lineage4.3.4 None
ERR133825 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR12015084 Other lineage4.8 None
ERR3283013 MDR-TB lineage4 None
ERR3283027 HR-TB None
ERR3283036 HR-TB None
ERR3797043 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3445487 Other La1.7.X-unk4 None
ERR3797060 Other La1.8.1 None
ERR3797058 Other lineage4.9 None
ERR3797071 Other lineage4.9 None
ERR3797073 HR-TB La1.8.1 None
ERR3797069 Other None
ERR3804155 Other lineage4.1.2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4407463 HR-TB None
ERR4796929 Sensitive lineage4 None
ERR4024991 Other None
ERR4188247 HR-TB None
ERR4407452 Sensitive lineage3 None
ERR4596910 Sensitive lineage4 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769508 RR-TB lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4796254 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797184 Sensitive lineage4 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797588 MDR-TB lineage3 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4798262 HR-TB La1 None
ERR4798099 Other None
ERR7821126 Sensitive lineage1.1.3.2 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4799378 Sensitive lineage4 None
ERR12015085 Other lineage4.8 None
ERR12015083 Other lineage4.8;La3 None
ERR4811105 HR-TB None
ERR5336148 Other None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR6358979 Other None
ERR6359066 HR-TB lineage4 None
ERR6866547 Sensitive lineage4 None
ERR736834 Sensitive lineage4 None
ERR736839 Other None
ERR736848 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736867 HR-TB None
ERR736872 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR7801175 RR-TB lineage4.6.5 None
ERR7801176 RR-TB lineage4.6.5 None
ERR7821123 Other lineage1.1.3.2 None
ERR4800341 Other lineage3 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811142 MDR-TB None
ERR6866022 Other None
ERR6866410 Sensitive None
ERR6866639 Other None
ERR702404 HR-TB None
ERR702406 HR-TB None
ERR736874 HR-TB None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR7821163 Other lineage2.2.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9787153 Other lineage6.1.3 None
ERR9117709 HR-TB None
ERR9786440 Other lineage4.1 None
ERR9786569 Other lineage4.8 None
ERR9786617 Other lineage4.1.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117805 Other lineage4.3.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786445 Sensitive lineage4.8 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786604 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786843 Other None
ERR9787165 Other lineage6 None
ERR9787139 Other lineage6.3.1 None
ERR990545 Other lineage3 None
ERR9787197 Other None
ERR9787256 Other lineage6.1.3 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR10315567 Other lineage2.2.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1173400 Other None
SRR10808668 Sensitive lineage2.2.1 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1158918 Sensitive lineage4 None
SRR1172234 Other None
SRR1172728 MDR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172885 HR-TB lineage4.9 None
SRR1173118 Other None
SRR1173185 HR-TB lineage4.9 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173363 HR-TB None
SRR1173384 Other lineage4 None
SRR10808399 Sensitive lineage4 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1167384 Other lineage4 None
SRR1169194 Other None
SRR1169249 Other La3 None
SRR1169306 Other None
SRR1172817 HR-TB None
SRR1172857 MDR-TB None
SRR1172951 Other None
SRR1173153 HR-TB None
SRR1173166 Other lineage4.9 None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173484 Other lineage4 None
SRR1173450 RR-TB lineage4.9 None
SRR1173633 HR-TB lineage4.9 None
SRR1173562 HR-TB lineage4 None
SRR1173568 Other lineage4.9 None
SRR1173629 Other None
SRR1173777 Other lineage4 None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1173788 Other None
SRR1175074 MDR-TB None
SRR1175049 RR-TB None
SRR1175052 HR-TB lineage4.9 None
SRR1175090 Other lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1175472 MDR-TB lineage4 None
SRR1180137 Other lineage2.2.1 None
SRR1180440 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR1181289 Other lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR1183049 Other lineage2.2 None
SRR1184329 MDR-TB lineage4.9 None
SRR1184294 HR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR1184372 MDR-TB None
SRR1184388 Other None
SRR1196474 HR-TB lineage3.1 None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1196478 MDR-TB lineage4.9 None
SRR1196566 HR-TB None
SRR1196546 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196768 MDR-TB None
SRR12006550 Other lineage1.2.1.2 None
SRR12142341 HR-TB None
SRR12416824 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13837528 Other lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR13837827 Sensitive lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR14801749 Sensitive None
SRR15368973 Other None
SRR19303773 Other lineage4.6.2.2 None
SRR1710057 Other lineage2.1 None
SRR1791747 Other La1.8.1 None
SRR18003019 Other lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18910194 HR-TB lineage2.2 None
SRR19304036 HR-TB None
SRR19295647 Sensitive lineage4.9 None
SRR19303884 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR25827682 Other None