Rv3596c - c.717C>G


Drug resistance types
47 Sensitive 14 RR-TB 66 HR-TB 27 MDR-TB 9 Pre-XDR-TB 1 XDR-TB 170 Other
lineage Counts
lineage Count
lineage2.2.1 22
lineage4.9 103
La1.7.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 9
lineage4.1.1.1 4
24
lineage3 4
lineage4.8 10
lineage4.1.1.3 4
La3 2
lineage4.4.1.2 2
lineage2.1;lineage4.9 16
La3;lineage2.1;lineage4.9 2
lineage4.4.1.1 3
La1.2.BCG 1
M.canetti;lineage4.9 3
lineage4.1.2.1 13
lineage1.1.1 3
lineage2.1 5
lineage4.2.1 2
lineage4.9;lineage6.3 7
lineage4.3.4.2.1 4
lineage4.6.2.2 3
lineage4.9;lineage7 3
lineage4.7 3
lineage4.3.2.1 2
La1.8.1 1
lineage4.1.2 1
La1.2.BCG;La1.8.1 1
lineage6.3.1 1
lineage2.2.2 3
lineage2;lineage4.9 1
lineage4.3.3 3
lineage2.2 1
lineage2.2.1;lineage4.9 2
lineage2.2.1;lineage4 1
lineage2.2;lineage4 1
La3;lineage4.9 3
lineage4.2.2.2 1
lineage4.6.1.2 3
lineage2.1;lineage4.1.4;lineage4.9 1
lineage1.2.2.2 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.3.2 1
lineage4 4
lineage4.1.3 2
lineage2.1;lineage6.3 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage3.1 1
lineage1.1.2 1
lineage4.6.3;lineage4.9 1
lineage4.1.1.3.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.4.1.1.1 1
La3;lineage2 1
M.canetti;lineage2.1;lineage4.9 2
La3;lineage1.1.2 1
lineage3.1.2.1 1
La3;lineage3 1
lineage2.2.1;lineage6.3 1
lineage3.1.1 1
lineage4.9;lineage9 1
lineage4.3.4.1 1
La3;lineage2.2.1 2
lineage4.8.1 1
lineage6.1.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.2;lineage4 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;lineage4.8 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
lineage4.9.1 1
La1.7;lineage4.9 2
lineage4.3 1
lineage2.2.1;lineage3 1
lineage1;lineage4.9 1
lineage4.4 1
La1.7.1;La1.7.X-unk4 1
spoligotype Counts
spoligotype Count
None 334
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6458423 HR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6044942 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR3675236 Other None
SRR7535086 Other None
SRR5341267 Pre-XDR-TB lineage3 None
SRR1183054 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR11465025 Other lineage4.1.1.3 None
SRR1172885 HR-TB lineage4.9 None
ERR4800341 Other lineage3 None
SRR1172728 RR-TB La3 None
ERR6358951 Sensitive lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR3675549 Other lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR8758877 MDR-TB lineage4.1.1.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1180413 Sensitive lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR6045233 Other M.canetti;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR14066533 Sensitive lineage1.1.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
ERR4817069 RR-TB None
ERR2514692 Other None
ERR4817060 Other None
ERR181824 HR-TB lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
SRR1184372 MDR-TB None
SRR7496523 Other lineage4.7 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1180312 Sensitive lineage4.9 None
ERR9786604 Other None
SRR11462861 Other La1.8.1 None
SRR6046382 Sensitive lineage2.2.1 None
ERR4815752 Other lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1175052 HR-TB lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR9786569 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR1173788 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR3797069 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR1169194 Other lineage4.9 None
SRR6044780 Sensitive lineage4.9 None
SRR1196677 Other lineage2.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7645927 Other lineage4.8 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR15368973 Other lineage4.9 None
ERR4815604 Other None
SRR18910194 HR-TB lineage2.2.2 None
SRR6046133 HR-TB lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
SRR6045219 HR-TB lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR9117805 Other lineage4.3.2 None
ERR176779 HR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR3283044 Other lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR11049020 Other lineage4.8 None
ERR4817554 Other lineage1.1.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR16156697 RR-TB lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
ERR2432997 Other lineage4.8 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
ERR212125 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR502912 Other lineage2.2.1 None
SRR1181402 Sensitive lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR7070157 Other lineage4.1.1.3.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR6359070 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
SRR1173153 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR10808730 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR9786671 Other None
SRR1173633 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR29051093 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6044855 Sensitive lineage4.9 None
SRR29096541 Other lineage4.9 None
ERR4407463 HR-TB None
ERR4798823 HR-TB lineage4 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1181325 Sensitive lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR1173778 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4769444 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4808964 RR-TB lineage2.2.1 None
SRR3675275 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2514327 HR-TB lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1710057 Other lineage2.1 None
SRR1175074 Other None
SRR20969677 HR-TB La3;lineage2 None
SRR1180444 Sensitive lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR1173355 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
SRR3416776 Other lineage2.1 None
SRR7755655 Other lineage4.1.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496517 Other None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR1023302 MDR-TB La3;lineage3 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR16156775 Other lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR181887 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR10315751 MDR-TB lineage4.8 None
SRR6046521 Other lineage4.4.1.1 None
SRR29051077 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4797588 MDR-TB lineage3 None
SRR1196474 Other lineage3.1.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR11465279 Sensitive lineage4.3.4.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR1180319 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR4769493 Other lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR3797062 RR-TB lineage4.9 None
ERR9117709 Other None
ERR9786611 HR-TB lineage4.1.3 None
SRR1180399 Sensitive lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR1034634 HR-TB lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9787153 Other lineage6.1.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR25827682 Other None
SRR1172857 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786421 Other lineage4.1.2.1 None
SRR1180355 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR2514821 Sensitive lineage2.2.1 None
ERR4819781 Other lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675572 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675457 Other lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR1063858 HR-TB lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045010 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4796577 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
ERR9787165 Other lineage6.1.3 None
ERR4819314 Other lineage1.1.1 None
SRR1172951 Other lineage4.9 None
SRR7645928 Other lineage4.7 None
ERR176651 Other lineage4.9 None
SRR7645906 Other lineage2.2.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR18213713 HR-TB None
ERR4817893 Other La3;lineage4.8 None
ERR736817 HR-TB lineage4.3.4 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR387051 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR245758 Other lineage4.9.1 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR7645899 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR3275941 RR-TB lineage4.3 nl
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR6045526 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR1173384 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
SRR5341330 Other lineage4.9 None
SRR6789626 Other None
SRR13423649 Sensitive lineage2.2.1 None
ERR4816999 Other None
SRR26159043 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR6359069 Sensitive lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR3675248 Other lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR12708392 Other lineage2.2.1 None