Rv0668 - c.2085C>G


Drug resistance types
82 Sensitive 4 RR-TB 24 HR-TB 11 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 66 Other
lineage Counts
lineage Count
lineage4.2;lineage4.8.1;lineage4.9 2
lineage5.1.4 1
lineage4.2;lineage4.9 2
La1.7;M.canetti;lineage4.9 4
lineage4.9 90
lineage4.1.1.3;lineage4.9 2
lineage2.2.1 8
lineage4.6.1.1 2
lineage3 3
lineage4.3.3 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.2.1;lineage4 1
La1.7 1
lineage2.1;lineage4.9 1
La1.7;lineage4.9 9
La3;lineage4.9 8
lineage4.1;lineage4.9 2
lineage4.4.1.1 1
lineage4.1.2.1 4
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage4.9 3
lineage5.2 2
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage1.1.1;lineage4 1
4
lineage4 5
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.5 1
lineage4.2.1.1;lineage4.3.3 1
La1.7.X-unk4;lineage4.9 1
lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.1.3 2
lineage2.2.1;lineage4.1.2.1 1
lineage3;lineage4.9 1
La1.2.BCG 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage1;lineage4.9 1
lineage4.9.1 1
lineage1.1.2 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8 1
La1.2;La1.8.1 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1.2.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.3.4.1 1
lineage6.1.3 1
spoligotype Counts
spoligotype Count
None 188
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR4811030 Sensitive lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4817998 Other lineage3 None
ERR369158 Other lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675522 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR4799547 HR-TB lineage2.2.1 None
ERR4830353 Other La1.7 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR6046897 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR3283011 Other La3;lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR6046594 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR5311094 HR-TB lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR4818110 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR2514692 Other None
ERR2517475 Other lineage4 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675477 Sensitive lineage4.9 None
ERR363500 Sensitive lineage4.9 None
ERR4796577 HR-TB None
SRR1180137 Other lineage2.2.1 None
SRR6046611 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR6044875 Sensitive lineage4.9 None
ERR369163 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR12708384 Sensitive lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797048 Other La3;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR349300 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11662694 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR363509 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR3675387 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675441 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR6044835 Other lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR12708416 Sensitive None
SRR5341396 Other lineage3;lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR20632814 Sensitive lineage4.9 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4797313 Sensitive lineage2.2.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR2514821 Sensitive lineage2.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3275450 Other lineage4 None
ERR369151 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR245758 Other lineage4.9.1 None
SRR3675501 Other La1.7;lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
SRR6044780 Sensitive lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR5341310 Other lineage1.1.2 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR363506 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR363421 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR349265 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR3797063 Sensitive La3;lineage4.9 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675248 Other lineage4.9 None
ERR349299 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
ERR2446382 Other lineage4 None
ERR4797201 Other lineage1.2.2.2 None
ERR990545 Other lineage3 None
SRR6046564 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR363502 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR363447 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR373947 Other lineage4.9 None