Rv0006 - p.Gly668Glu
Drug resistance types
35 Sensitive
3 RR-TB
144 HR-TB
11 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
119 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 45 |
| lineage4.1 | 3 |
| lineage4 | 31 |
| 148 | |
| lineage4.9;lineage4.6.3 | 1 |
| lineage2.2.1 | 16 |
| lineage3;lineage2.1 | 1 |
| lineage2.2 | 6 |
| lineage4.1.1.3 | 1 |
| La1.8.1 | 3 |
| lineage4.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage3 | 5 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 14 |
| lineage1.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage3.1 | 2 |
| lineage4.3.4.2.1 | 4 |
| La2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.1 | 2 |
| La1.6 | 1 |
| La1 | 1 |
| lineage4.1.3 | 2 |
| La1.2 | 3 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.5 | 2 |
| lineage4.3.3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 316 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8692897 | Other | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692898 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692818 | Other | lineage4.9 | None | SRR8692791 | Other | lineage4.9 | None | ERR4815604 | HR-TB | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675465 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | SRR3675502 | Other | None | SRR6325445 | HR-TB | None | SRR3675482 | HR-TB | None | ERR158583 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675488 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675234 | Other | None | SRR3675247 | Other | lineage4.9 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675501 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675236 | HR-TB | None | SRR3675279 | Other | None | SRR3675522 | Other | None | SRR3675311 | Other | None | SRR3675383 | HR-TB | None | SRR3675387 | Sensitive | None | ERR176740 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816999 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675550 | Other | None | SRR3675545 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675572 | Other | None | SRR3675558 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR212121 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3675574 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR7496472 | Other | None | ERR2446566 | Other | lineage4.1 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR1035162 | Other | None | ERR234659 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5341418 | Other | None | ERR4819051 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341456 | Other | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR4819839 | Sensitive | lineage1.1.2 | None | ERR2514692 | Other | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4821053 | Other | lineage3 | None | SRR5341470 | HR-TB | None | ERR2693231 | Other | None | ERR2693239 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045503 | HR-TB | None | ERR278594 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6044890 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6045399 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046362 | HR-TB | None | ERR4830353 | Other | None | SRR6046397 | Other | None | SRR6046492 | Other | None | SRR6046482 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR3077978 | Other | lineage1.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831117 | HR-TB | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR294248 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535086 | Other | None | ERR502532 | HR-TB | None | ERR502889 | Other | None | ERR323038 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7496509 | Other | None | ERR323043 | HR-TB | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323053 | HR-TB | None | ERR323055 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR323063 | HR-TB | None | ERR11466499 | Other | lineage4.3.4.1 | None | ERR11268039 | Other | La1.6 | None | ERR067681 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR323108 | HR-TB | lineage4 | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | ERR323107 | Other | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR133986 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3283055 | HR-TB | None | ERR3439432 | Other | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797044 | Other | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797083 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797082 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4188350 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR5336148 | Other | None | ERR4188247 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6198317 | Other | La1.2 | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR5908228 | Other | lineage4.3.3 | None | ERR4811030 | Sensitive | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR6359045 | HR-TB | None | ERR6358991 | HR-TB | None | ERR702406 | HR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736867 | HR-TB | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR9117709 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR10809074 | Sensitive | lineage4 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | ERR990545 | Other | lineage3 | None | ERR9786671 | Other | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1172310 | HR-TB | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1174897 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861532 | Other | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR13861586 | Other | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1640750 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR20969731 | Other | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None |
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