Rv1630 - c.582C>G
Drug resistance types
14 Sensitive
3 RR-TB
66 HR-TB
23 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
96 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 30 |
| lineage4.3.3 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.8 | 4 |
| lineage4.2;La1.7 | 1 |
| 78 | |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1 | 2 |
| lineage4.1.1.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.2.1 | 11 |
| lineage2.2.1 | 13 |
| lineage2.1 | 3 |
| lineage4 | 15 |
| lineage2.2 | 3 |
| lineage4.6.1.2 | 5 |
| La1.8.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.7 | 3 |
| lineage4.2.1 | 2 |
| lineage5.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.1.3 | 2 |
| lineage3 | 4 |
| lineage4;lineage3.1 | 1 |
| lineage2 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.4.1;lineage4.3.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage6.3.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 205 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26159043 | Other | lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR11081258 | Other | lineage4.8 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675465 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | SRR3675236 | HR-TB | None | SRR3675311 | Other | None | ERR212123 | Other | None | ERR4815752 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4817060 | RR-TB | None | ERR2446070 | Sensitive | lineage4.8 | None | ERR2229542 | Other | lineage4.8 | None | ERR4816999 | Other | None | SRR3675574 | HR-TB | None | SRR3675572 | Other | None | SRR3742665 | HR-TB | None | ERR4816550 | Sensitive | lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4818021 | Other | La1.8.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR7496472 | Other | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR234659 | HR-TB | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5007188 | Other | lineage4 | None | ERR4818615 | Other | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | SRR5341313 | HR-TB | None | ERR2693230 | Other | None | SRR5341315 | Sensitive | None | SRR5341333 | HR-TB | None | ERR2693231 | Other | None | ERR4819932 | Other | lineage4.7 | None | ERR2693227 | Other | lineage4.9 | None | ERR2693254 | Other | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046397 | Other | None | SRR6046305 | Other | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046540 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | SRR6785262 | Sensitive | lineage4.2.1 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6789626 | Other | None | SRR7496517 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR502532 | HR-TB | None | SRR7496509 | Other | None | ERR11466499 | Other | lineage4.3.4.1 | None | SRR7535086 | Other | None | SRR7496523 | Other | lineage4.7 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323043 | HR-TB | None | ERR1034652 | Other | None | ERR067699 | HR-TB | lineage4 | None | ERR036207 | Other | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR10796596 | Other | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283024 | Other | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3283051 | Other | lineage4.9 | None | ERR3797017 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797044 | Other | None | ERR3797058 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR400529 | Other | lineage3 | None | ERR4407463 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4800341 | Other | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4810741 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811022 | HR-TB | None | ERR702406 | HR-TB | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR702404 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR736867 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR736874 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9634265 | Sensitive | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786508 | Sensitive | lineage4.3.4.1;lineage4.3.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR9787197 | Other | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1172728 | MDR-TB | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1172817 | HR-TB | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173118 | Other | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180440 | Other | lineage4.9 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1196494 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1196677 | HR-TB | lineage2 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR13837702 | Sensitive | lineage4.9 | None | SRR13837599 | Sensitive | lineage4.9 | None | SRR13837696 | HR-TB | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR13837709 | Sensitive | lineage4.9 | None | SRR15368973 | Other | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20969677 | HR-TB | lineage2 | None | SRR25827682 | Other | None |
|---|
