ERR3797014
|
Other
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SAMEA3501070
|
RR-TB
|
lineage4.8
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
SRR1172857
|
Other
|
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR4817060
|
Other
|
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
SRR6045555
|
Other
|
lineage4.9
|
None
|
SRR3675457
|
Other
|
lineage4.9
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4815310
|
Other
|
lineage2.2.1;lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR3675505
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
SAMEA3501063
|
RR-TB
|
lineage4.8
|
None
|
SRR1140712
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR978733
|
RR-TB
|
lineage4.8
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR978746_ERR978747_ERR978748
|
RR-TB
|
lineage4.8
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR2513382
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR4817893
|
Other
|
La3;lineage4.8
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR3283028
|
Other
|
La3;lineage4
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675580
|
Sensitive
|
lineage4.9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
ERR978726
|
RR-TB
|
lineage4.8
|
None
|
SRR1169194
|
Other
|
lineage4.9
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR7801176
|
RR-TB
|
lineage4.6.5
|
None
|
SRR18909918
|
Other
|
lineage2.2.1.1
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR7755645
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
SAMEA3501065
|
RR-TB
|
lineage4.8
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
ERR1063855
|
Other
|
lineage4.9
|
None
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
ERR4816999
|
Other
|
|
None
|
ERR2513470
|
Other
|
lineage4.2.2.2
|
None
|
SRR6045219
|
HR-TB
|
lineage4.9
|
None
|
ERR11465665
|
Other
|
lineage4.1.1.3
|
None
|
ERR978693
|
Other
|
lineage4.8
|
None
|
ERR9786617
|
Other
|
lineage4.1.1.1
|
None
|
ERR2512423
|
Other
|
lineage4.1.1.3
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6785263
|
Sensitive
|
lineage2.2.1
|
None
|
SRR3675236
|
Other
|
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR7535086
|
Other
|
|
None
|
ERR5987263
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR2514430
|
Other
|
lineage3.1.2;lineage4.1.1.3.1
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
ERR2228900
|
Other
|
lineage4.8
|
None
|
ERR9117709
|
Other
|
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
SRR3675488
|
Other
|
La1.7;lineage4.9
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR502532
|
Other
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR978735
|
Other
|
lineage4.8
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
ERR7821163
|
Other
|
lineage2.2.1
|
None
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR1023502
|
MDR-TB
|
lineage2;lineage4
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR29096174
|
Sensitive
|
La1.7;lineage4.9
|
None
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
SAMEA3501052
|
RR-TB
|
lineage4.8
|
None
|
SAMEA3501046
|
RR-TB
|
lineage4.8
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
SRR6046196
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR2514692
|
Other
|
|
None
|
ERR978757
|
RR-TB
|
lineage4.8
|
None
|
SRR25827682
|
Other
|
|
None
|
ERR234659
|
Other
|
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR7755649
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR2514821
|
Sensitive
|
lineage2.2.1
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR6045795
|
Sensitive
|
lineage2.2.1
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR29051093
|
Other
|
lineage4.9
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
ERR11252736
|
Other
|
lineage4.9
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR978694_ERR978693
|
Other
|
lineage4.8
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR245758
|
Other
|
lineage4.9.1
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR3797017
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
SRR7496517
|
Other
|
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
SAMEA3501015
|
Other
|
lineage4.8
|
None
|
ERR176518
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4815550
|
Other
|
lineage2.2;lineage4.9
|
None
|
ERR4830353
|
Other
|
La1.7
|
None
|
ERR978761_ERR978762_ERR978760
|
RR-TB
|
lineage4.8
|
None
|
SRR15368973
|
Other
|
lineage4.9
|
None
|
ERR978762
|
Other
|
lineage4.8
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR978750_ERR978752_ERR978751
|
RR-TB
|
lineage4.8
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
ERR978755_ERR978756_ERR978754_ERR978757
|
RR-TB
|
lineage4.8
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
SRR7645901
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
ERR9786515
|
Other
|
lineage4.1.2.1
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
SRR23961542
|
Other
|
La1;lineage4.9
|
None
|
ERR2693230
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
SRR25827605
|
Pre-XDR-TB
|
lineage2.2.1;lineage3;lineage4
|
None
|
ERR4769493
|
Other
|
lineage4.9
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
SRR6046594
|
Sensitive
|
lineage4.9
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
SRR1173740
|
Other
|
lineage3;lineage4
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
ERR978734_ERR978733_ERR978735
|
RR-TB
|
lineage4.8
|
None
|
ERR978746
|
RR-TB
|
lineage4.8
|
None
|
ERR5311094
|
HR-TB
|
lineage4.9
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR978726_ERR978727
|
RR-TB
|
lineage4.8
|
None
|
SRR23961549
|
Other
|
La1.2
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6046485
|
Other
|
lineage4.9
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
ERR978754
|
RR-TB
|
lineage4.8
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
ERR11252558
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SAMEA3501067
|
RR-TB
|
lineage4.8
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR11252664
|
Other
|
lineage2.2.1
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR405209
|
Sensitive
|
La1.7;lineage4.9
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
SRR1173281
|
Other
|
lineage3
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
ERR3797087
|
Sensitive
|
lineage4.9
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR12006550
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR29050928
|
Other
|
lineage4.9
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR9786508
|
Sensitive
|
lineage4.3.3;lineage4.3.4.1
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
ERR978750
|
RR-TB
|
lineage4.8
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
ERR2228910
|
Other
|
lineage4.8
|
None
|
ERR978761
|
Other
|
lineage4.8
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
ERR3283024
|
Other
|
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR29772570
|
Other
|
lineage4.9
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
ERR9119733
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
ERR2693245
|
HR-TB
|
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
SRR3675501
|
Other
|
La1.7;lineage4.9
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
ERR7801175
|
HR-TB
|
lineage4.6.5
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR978752
|
Other
|
lineage4.8
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
ERR5917972
|
MDR-TB
|
lineage4.4.1.1
|
za
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR13245558
|
MDR-TB
|
La3;lineage2.2.2
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
ERR3283031
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR16627752
|
RR-TB
|
lineage4.4
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR1062880
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR29016901
|
Other
|
La3;lineage4.9
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
ERR978760
|
RR-TB
|
lineage4.8
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4815816
|
Other
|
lineage4.5
|
gb
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6785268
|
Sensitive
|
lineage4.2.1
|
None
|
ERR3283044
|
Other
|
lineage4
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
ERR11081258
|
Other
|
lineage4.8
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
SRR7496509
|
Other
|
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6044835
|
Other
|
lineage4.9
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|