Rv1630 - c.567C>G
Drug resistance types
50 Sensitive
18 RR-TB
84 HR-TB
31 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
127 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 24 |
| 113 | |
| lineage4.2.1 | 4 |
| lineage4.3.4.2.1 | 2 |
| lineage3 | 7 |
| lineage4.9 | 55 |
| lineage4 | 33 |
| lineage4.1.2.1 | 11 |
| lineage4;lineage3.1 | 1 |
| lineage4.1.3 | 2 |
| La1.3 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage2 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.5 | 3 |
| lineage4.4.1.1 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.6.5 | 2 |
| lineage1.1.2 | 2 |
| lineage4.3.2 | 1 |
| lineage5.2 | 2 |
| lineage4.8 | 14 |
| lineage4.3.4.1;lineage4.3.3 | 1 |
| lineage4.1.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage6.3.1 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.3.3 | 1 |
| lineage3.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage2.1 | 2 |
| lineage4.4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2 | 2 |
| lineage3.1.3 | 1 |
| lineage4.1 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.8;La3 | 1 |
| La1.8.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage4.7 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 318 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR323043 | HR-TB | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR017781 | Other | lineage3 | None | ERR019855 | Other | lineage3 | None | ERR1063862 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283024 | Other | None | ERR3283028 | Other | None | ERR3283051 | Other | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3439265 | Other | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797036 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797044 | Other | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR4769495 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811142 | MDR-TB | None | ERR4811030 | Sensitive | None | ERR4811105 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR4812155 | Sensitive | None | ERR5336148 | Other | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9786604 | Other | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786508 | Sensitive | lineage4.3.4.1;lineage4.3.3 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786671 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1172234 | Other | None | SRR1169194 | Other | None | SRR1172728 | MDR-TB | None | SRR1172717 | Other | lineage4.9 | None | SRR1172951 | Other | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1173118 | Other | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173788 | Other | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1180250 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1196566 | HR-TB | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1181368 | Other | lineage4.9 | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR13837709 | Sensitive | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19304036 | HR-TB | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081258 | Other | lineage4.8 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969677 | HR-TB | lineage2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692887 | Other | None | SRR3675455 | Sensitive | lineage4 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR3675477 | Other | lineage4.9 | None | ERR4815604 | HR-TB | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675465 | HR-TB | None | ERR4815310 | Other | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675221 | HR-TB | None | SRR3675222 | Other | None | SRR3675229 | Other | lineage4 | None | SRR3675501 | HR-TB | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675311 | Other | None | ERR4815550 | Other | lineage4 | None | ERR4815752 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SAMEA3501015 | Other | lineage4.8 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | SRR3675522 | Other | None | ERR4816999 | Other | None | SRR3675542 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR2229084 | Sensitive | lineage4.8 | dk | ERR2027263 | Other | lineage4 | None | SRR3675572 | Other | None | ERR4817060 | RR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3742665 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816550 | Sensitive | lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR2228890 | Other | lineage4 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | SRR7496472 | Other | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR234659 | HR-TB | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR245758 | Other | lineage4.9.1 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR5341396 | Other | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5007188 | Other | lineage4 | None | ERR4818615 | Other | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR2514821 | Other | lineage2.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2514692 | Other | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341302 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341333 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2693231 | Other | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6045555 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045327 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046540 | HR-TB | None | ERR4830353 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | SRR6785262 | Sensitive | lineage4.2.1 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | ERR4831638 | Sensitive | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR6789626 | Other | None | ERR502532 | HR-TB | None | ERR502943 | HR-TB | None | SRR7496509 | Other | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR7496517 | Other | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7535086 | Other | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None |
|---|
