Rv1630 - c.567C>G
Drug resistance types
29 Sensitive
23 RR-TB
46 HR-TB
21 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
162 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 14 |
| lineage4.9 | 63 |
| lineage4.6.1.2 | 4 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| La3;lineage4.9 | 9 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.2.1 | 2 |
| lineage5.2 | 2 |
| La1.7;lineage4.9 | 3 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.8 | 31 |
| lineage2.2.1 | 19 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2.1 | 11 |
| lineage2.1;lineage4.9;lineage6.3 | 8 |
| lineage2;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 6 |
| La3;lineage4 | 1 |
| 18 | |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage3 | 4 |
| lineage2.1 | 5 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.9.1 | 1 |
| lineage4.7 | 2 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage1.1.2 | 1 |
| lineage4 | 4 |
| lineage4.1.3 | 2 |
| lineage4.2.2.2 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.5 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.1.1.1 | 3 |
| lineage3;lineage4 | 1 |
| lineage1.2.2.2 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| La1.2 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage3;lineage4 | 1 |
| lineage4.6.5 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.3;lineage4.3.4.1 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.4 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage3.1 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7 | 1 |
| La3;lineage2 | 1 |
| La3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.2 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2.2 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 288 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811030 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR3675522 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR2228910 | Other | lineage4.8 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR3675457 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR11081258 | Other | lineage4.8 | None | SRR1196546 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR3283028 | Other | La3;lineage4 | None | SRR7496509 | Other | None | ERR11252664 | Other | lineage2.2.1 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR7535086 | Other | None | ERR4407463 | HR-TB | None | ERR4817060 | Other | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4800341 | HR-TB | lineage3 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR2514821 | Other | lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | ERR245758 | Other | lineage4.9.1 | None | ERR4819932 | Other | lineage4.7 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4815816 | Other | lineage4.5 | gb | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR6785263 | Sensitive | lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR1173281 | Other | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR3416776 | Other | lineage2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4815752 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR6046594 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496523 | Other | lineage4.7 | None | ERR9786617 | Other | lineage4.1.1.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR181824 | MDR-TB | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | ERR9786604 | Other | None | SRR6789626 | Other | None | ERR11252736 | Other | lineage4.9 | None | SRR18213713 | HR-TB | None | ERR9787197 | Other | None | SRR3675236 | Other | None | ERR4816999 | Other | None | SRR28119777 | Other | lineage4.9 | None | SRR6045795 | Other | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR3675275 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR9786515 | Other | lineage4.1.2.1 | None | SRR23961549 | Other | La1.2 | None | ERR4769493 | Other | lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR25827605 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR1169194 | Other | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR702406 | Other | lineage2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR9786508 | Sensitive | lineage4.3.3;lineage4.3.4.1 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | SRR6045526 | Other | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR6789621 | Other | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1173400 | Other | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR4811031 | Other | lineage4.5 | None | SRR7496471 | Sensitive | lineage4 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR978693 | Other | lineage4.8 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | SRR1165699 | Other | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR978752 | Other | lineage4.8 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR2229542 | Other | lineage4.8 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR1172817 | Other | La3 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR6046485 | Other | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR978761 | Other | lineage4.8 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR9117709 | Other | None | ERR234659 | HR-TB | None | ERR2514692 | Other | None | SRR25827682 | Other | None | SRR1172857 | Other | None | SRR7496517 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR11465665 | Other | lineage4.1.1.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR3283044 | Other | lineage4 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
