Rv2752c - c.1128G>C


Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
41 Sensitive 6 RR-TB 103 HR-TB 30 MDR-TB 3 Pre-XDR-TB 3 XDR-TB 108 Other
lineage Counts
lineage Count
lineage4.9 84
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage2.2.1 12
lineage4.1.1.3 1
lineage3 3
M.canetti;lineage2.1;lineage4.9 11
lineage4.1.1.2 1
lineage2.1;lineage4.9 12
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.8 4
lineage4.1.3 2
La3;lineage4.9 3
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4 3
lineage2.1 2
M.canetti;lineage2.1;lineage6.3 2
lineage4.9;lineage6.3 6
lineage1.1.3.1 1
lineage4.1.1;lineage4.9 1
lineage1.1.2 2
La3;M.canetti;lineage2.1;lineage4.9 11
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage3 1
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
23
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8;lineage4.9 2
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.2 2
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 6
La3;M.canetti;lineage2.1;lineage3.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 2
La1.7;lineage4.9 6
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage4.3.2.1 2
lineage4.3.4.2.1 1
lineage4.4.1.2 1
lineage3.1.2.2 1
lineage4.9;lineage9 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.6.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1.1.1 3
lineage6 1
lineage3.1.2.1 1
lineage2.2.1.2 2
lineage2.2.1;lineage3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1 1
lineage4.1.2 2
La3;lineage2.1;lineage4.9 3
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage4.2;lineage4.8.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage2.2.1.1 2
lineage4.1.2.1 3
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.2;lineage4.9 2
La3;M.canetti;lineage4.9 1
M.canetti;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.2 1
lineage4.7 1
La1;lineage4.9 1
lineage6.3.1 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
lineage4.4.1.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.3.4 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.8.1 1
spoligotype Counts
spoligotype Count
None 294
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR323107 Sensitive lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341300 HR-TB lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR3675235 Sensitive lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4821053 Other lineage3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR9786611 HR-TB lineage4.1.3 None
SRR29017461 Other La3;lineage4.9 None
ERR751326 Other lineage4.9 None
SRR12142341 HR-TB lineage2.2.1 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4817893 Other lineage4.8 None
ERR4817731 HR-TB lineage4.9 None
ERR4799378 Sensitive lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR20969677 HR-TB lineage2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR9970979 Sensitive lineage4.8 None
ERR473332 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR2229542 Other lineage4.8 None
SRR6045892 Sensitive lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR5341469 HR-TB lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6044815 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR3675572 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4815604 Other None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR26399973 Other La3;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR5162090 RR-TB lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR6789626 Other None
ERR2027263 Other lineage4 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR5341366 Sensitive lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4810741 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR6358755 Other lineage4.6.1 None
ERR4811142 RR-TB None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
SRR1196546 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9787165 Other lineage6 None
ERR987729 HR-TB lineage3.1.2.1 None
SRR5341303 Sensitive lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2 None
SRR20969708 HR-TB lineage2.2.1 None
SRR5341453 Other lineage4.9 None
ERR4816585 Other lineage2.2.1 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR7240492 HR-TB La1.7.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR9970980 Other lineage4.1.2 None
SRR3675488 Other La1.7;lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR779852 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR323085 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR987722 MDR-TB None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1184372 MDR-TB None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675457 Other lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR18213713 HR-TB None
ERR4797054 Pre-XDR-TB lineage2.2.1.2 None
ERR1063896 Sensitive None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR4800341 Other None
ERR4816999 Other None
SRR26159043 Other lineage4.9 None
ERR4811105 HR-TB None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR772255 MDR-TB lineage4.3.2 None
ERR4798504 RR-TB lineage3 None
ERR4797193 HR-TB lineage1.1.2 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811075 Other None
ERR4811311 Other None
SRR3675248 Other lineage4.9 None
ERR4819932 Sensitive lineage4.7 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR12416824 HR-TB None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR7535086 Other None
SRR17832802 HR-TB lineage3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1035122 Sensitive lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702406 Other lineage2.1 None
ERR9117709 Other None
SRR6325447 HR-TB lineage4.1.1.1 None
SRR3675246 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR9970978 Sensitive lineage4.1.2 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1034634 HR-TB lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1184294 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR29097037 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR25827682 Other None
ERR9787197 Other None
ERR4814352 Other lineage2.2.1 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR19295647 Sensitive lineage4.9 None
ERR2514821 Sensitive lineage2.2.1 None
ERR4797474 Sensitive lineage4.9 None
ERR9786604 Other None
SRR3675243 Other lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR4796254 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR7535082 Sensitive lineage4.9 None
SRR29096541 Other lineage4.9 None
SRR29096410 Other lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675385 Other La1.7;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR502511 Sensitive lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1791747 Other La1.8.1 None
ERR702405 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR13285068 Sensitive lineage4.9 None