TB-Profiler
Home
Upload
SRA data
Rv1173
- c.930A>C
Drug resistance types
6 Sensitive
21 RR-TB
82 HR-TB
50 MDR-TB
5 Pre-XDR-TB
4 XDR-TB
178 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
50
M.canetti;lineage2.1;lineage4.9
26
23
lineage2.1;lineage4.9
19
lineage2.2.1
18
lineage4.1.2.1
17
La3;M.canetti;lineage2.1;lineage4.9
12
lineage2.1;lineage4.9;lineage6.3
9
lineage4.9;lineage6.3
7
M.canetti;lineage2.1;lineage4.9;lineage6.3
6
Showing 1 to 10 of 104 entries
Previous
1
2
3
4
5
…
11
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
346
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR11049020
Other
lineage4.8
None
ERR11068570
Other
lineage4
None
ERR11252664
Other
lineage2.2.1
None
ERR11252736
Other
lineage4.9
None
ERR11465665
Other
lineage4.1.1.3
None
ERR11465802
Other
La1.7;lineage4.3.4.1
None
ERR11466146
Other
lineage4.3.4.2.1
None
Showing 1 to 10 of 346 entries
Previous
1
2
3
4
5
…
35
Next