Run ID: SRR13861611
Sample name:
Date: 03-04-2023 09:36:16
Number of reads: 1012428
Percentage reads mapped: 16.89
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 0.98 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 0.99 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrB | 6190 | c.951A>G | synonymous_variant | 0.15 |
gyrB | 6209 | c.970C>T | synonymous_variant | 0.16 |
gyrB | 6214 | c.975G>C | synonymous_variant | 0.16 |
gyrB | 6217 | c.978G>C | synonymous_variant | 0.16 |
gyrB | 6223 | c.984G>C | synonymous_variant | 0.16 |
gyrB | 6280 | c.1041T>C | synonymous_variant | 0.16 |
gyrB | 6292 | c.1053G>C | synonymous_variant | 0.14 |
gyrA | 7649 | c.348C>T | synonymous_variant | 0.13 |
gyrA | 7652 | c.351C>T | synonymous_variant | 0.13 |
gyrA | 7728 | c.427_429delAGGinsCGC | synonymous_variant | 0.13 |
gyrA | 7760 | c.459C>T | synonymous_variant | 0.13 |
gyrA | 8048 | c.747C>T | synonymous_variant | 0.14 |
gyrA | 8054 | c.753T>C | synonymous_variant | 0.14 |
gyrA | 8057 | c.756A>G | synonymous_variant | 0.14 |
gyrA | 8069 | c.768T>C | synonymous_variant | 0.16 |
gyrA | 8078 | c.777A>G | synonymous_variant | 0.14 |
gyrA | 8090 | c.789C>G | synonymous_variant | 0.16 |
gyrA | 8096 | c.795T>C | synonymous_variant | 0.16 |
gyrA | 8099 | c.798T>C | synonymous_variant | 0.18 |
gyrA | 8111 | c.810G>C | synonymous_variant | 0.18 |
gyrA | 8156 | c.855T>C | synonymous_variant | 0.19 |
gyrA | 8168 | c.867A>G | synonymous_variant | 0.19 |
gyrA | 8324 | c.1023T>C | synonymous_variant | 0.14 |
gyrA | 8391 | p.Tyr364His | missense_variant | 0.16 |
gyrA | 8420 | c.1119T>C | synonymous_variant | 0.15 |
gyrA | 8423 | c.1122G>C | synonymous_variant | 0.15 |
gyrA | 8442 | c.1141C>T | synonymous_variant | 0.19 |
gyrA | 8453 | c.1152A>C | synonymous_variant | 0.15 |
gyrA | 8462 | c.1161A>G | synonymous_variant | 0.15 |
gyrA | 8471 | c.1170T>C | synonymous_variant | 0.17 |
gyrA | 8480 | c.1179C>T | synonymous_variant | 0.15 |
gyrA | 8486 | c.1185T>C | synonymous_variant | 0.15 |
gyrA | 8489 | c.1188A>G | synonymous_variant | 0.15 |
gyrA | 8498 | c.1197C>T | synonymous_variant | 0.15 |
gyrA | 8516 | c.1215T>C | synonymous_variant | 0.15 |
gyrA | 8519 | c.1218A>C | synonymous_variant | 0.16 |
gyrA | 8546 | c.1245T>C | synonymous_variant | 0.13 |
mshA | 575623 | c.276C>G | synonymous_variant | 0.14 |
mshA | 575659 | c.312A>G | synonymous_variant | 0.17 |
mshA | 575665 | c.318G>C | synonymous_variant | 0.16 |
mshA | 575704 | c.357T>C | synonymous_variant | 0.15 |
mshA | 575705 | c.358T>C | synonymous_variant | 0.15 |
mshA | 575713 | c.366G>A | synonymous_variant | 0.15 |
mshA | 575719 | c.372C>T | synonymous_variant | 0.15 |
mshA | 575734 | c.387T>G | synonymous_variant | 0.16 |
mshA | 575737 | c.390T>C | synonymous_variant | 0.16 |
mshA | 575746 | c.399C>G | synonymous_variant | 0.17 |
mshA | 575752 | c.405G>A | synonymous_variant | 0.2 |
mshA | 575767 | c.420G>A | synonymous_variant | 0.18 |
mshA | 575771 | p.Val142Ser | missense_variant | 0.16 |
mshA | 575779 | c.432A>G | synonymous_variant | 0.17 |
rpoB | 760130 | p.Asp108Glu | missense_variant | 0.16 |
rpoB | 760139 | c.333A>G | synonymous_variant | 0.16 |
rpoB | 760142 | c.336C>G | synonymous_variant | 0.16 |
rpoB | 760181 | c.375T>C | synonymous_variant | 0.15 |
rpoB | 760184 | c.378A>G | synonymous_variant | 0.15 |
rpoB | 760340 | c.534G>C | synonymous_variant | 0.15 |
rpoB | 760361 | c.555T>C | synonymous_variant | 0.15 |
rpoB | 760475 | c.669A>G | synonymous_variant | 0.21 |
rpoB | 760481 | c.675G>C | synonymous_variant | 0.22 |
rpoB | 760484 | c.678A>G | synonymous_variant | 0.22 |
rpoB | 760514 | c.708C>T | synonymous_variant | 0.19 |
rpoB | 760522 | p.Ser239Asn | missense_variant | 0.18 |
rpoB | 760532 | c.726T>C | synonymous_variant | 0.18 |
rpoB | 760533 | p.Val243Thr | missense_variant | 0.18 |
rpoB | 760547 | c.741G>C | synonymous_variant | 0.17 |
rpoB | 760563 | p.Arg253Met | missense_variant | 0.18 |
rpoB | 760591 | p.Val262Ala | missense_variant | 0.2 |
rpoB | 760611 | c.805T>C | synonymous_variant | 0.17 |
rpoB | 760634 | c.828T>C | synonymous_variant | 0.19 |
rpoB | 760646 | c.840C>G | synonymous_variant | 0.16 |
rpoB | 760655 | c.849A>G | synonymous_variant | 0.17 |
rpoB | 760661 | c.855A>C | synonymous_variant | 0.16 |
rpoB | 760670 | c.864G>C | synonymous_variant | 0.16 |
rpoB | 760674 | c.868T>C | synonymous_variant | 0.16 |
rpoB | 760679 | c.873A>G | synonymous_variant | 0.17 |
rpoB | 760683 | c.877T>C | synonymous_variant | 0.17 |
rpoB | 760718 | c.912C>G | synonymous_variant | 0.15 |
rpoB | 760724 | c.918T>C | synonymous_variant | 0.16 |
rpoB | 760730 | c.924T>C | synonymous_variant | 0.15 |
rpoB | 760919 | c.1113C>G | synonymous_variant | 0.15 |
rpoB | 760925 | c.1119T>C | synonymous_variant | 0.15 |
rpoB | 760928 | c.1122G>C | synonymous_variant | 0.15 |
rpoB | 760934 | c.1128C>T | synonymous_variant | 0.14 |
rpoB | 760946 | c.1140A>G | synonymous_variant | 0.14 |
rpoB | 761222 | c.1416G>C | synonymous_variant | 0.18 |
rpoB | 762083 | c.2277T>C | synonymous_variant | 0.17 |
rpoB | 762086 | c.2280G>C | synonymous_variant | 0.16 |
rpoB | 762131 | c.2325C>G | synonymous_variant | 0.15 |
rpoB | 762143 | c.2337T>C | synonymous_variant | 0.14 |
rpoC | 762698 | c.-672C>T | upstream_gene_variant | 1.0 |
rpoB | 762936 | p.Ser1044Thr | missense_variant | 0.13 |
rpoB | 762958 | p.Leu1051Pro | missense_variant | 0.85 |
rpoC | 763528 | c.159G>A | synonymous_variant | 0.13 |
rpoC | 763546 | c.177A>G | synonymous_variant | 0.15 |
rpoC | 763594 | c.225C>T | synonymous_variant | 0.15 |
rpoC | 763633 | c.264T>C | synonymous_variant | 0.16 |
rpoC | 763636 | c.267T>C | synonymous_variant | 0.16 |
rpoC | 763642 | c.273G>C | synonymous_variant | 0.16 |
rpoC | 763660 | c.291T>G | synonymous_variant | 0.14 |
rpoC | 763675 | c.306C>G | synonymous_variant | 0.16 |
rpoC | 764521 | c.1152T>C | synonymous_variant | 0.17 |
rpoC | 764714 | c.1345C>T | synonymous_variant | 0.15 |
rpoC | 764720 | c.1351C>T | synonymous_variant | 0.15 |
rpoC | 765319 | c.1950A>G | synonymous_variant | 0.15 |
rpoC | 765326 | p.His653Ala | missense_variant | 0.15 |
rpoC | 765330 | p.Ser654Asn | missense_variant | 0.15 |
rpoC | 765383 | p.Met672Leu | missense_variant | 0.17 |
rpoC | 765404 | p.Leu679Val | missense_variant | 0.14 |
rpoC | 765409 | c.2040T>C | synonymous_variant | 0.15 |
rpoC | 765412 | c.2043T>C | synonymous_variant | 0.15 |
rpoC | 765421 | c.2052C>G | synonymous_variant | 0.14 |
rpoC | 765796 | c.2427C>T | synonymous_variant | 0.15 |
rpoC | 765811 | c.2442T>C | synonymous_variant | 0.17 |
rpoC | 765814 | c.2445A>G | synonymous_variant | 0.17 |
rpoC | 765826 | c.2457T>C | synonymous_variant | 0.21 |
rpoC | 765835 | c.2466C>T | synonymous_variant | 0.17 |
rpoC | 765883 | c.2514C>G | synonymous_variant | 0.17 |
rpoC | 765886 | c.2517C>G | synonymous_variant | 0.17 |
rpoC | 765892 | c.2523T>C | synonymous_variant | 0.17 |
rpoC | 765928 | c.2559C>G | synonymous_variant | 0.2 |
rpsL | 781832 | c.273T>C | synonymous_variant | 0.14 |
rplC | 800771 | c.-38C>T | upstream_gene_variant | 0.17 |
rplC | 800814 | c.6A>G | synonymous_variant | 0.18 |
rplC | 800817 | c.9A>T | synonymous_variant | 0.17 |
rplC | 800937 | c.129A>G | synonymous_variant | 0.15 |
rplC | 800939 | p.Arg44His | missense_variant | 0.15 |
rplC | 800949 | c.141T>C | synonymous_variant | 0.14 |
rplC | 801301 | c.493C>A | synonymous_variant | 0.14 |
rplC | 801312 | c.504G>C | synonymous_variant | 0.22 |
rplC | 801324 | c.516T>C | synonymous_variant | 0.17 |
rplC | 801336 | c.528C>G | synonymous_variant | 0.15 |
rplC | 801339 | c.531T>C | synonymous_variant | 0.15 |
rplC | 801341 | p.Leu178Gln | missense_variant | 0.15 |
rplC | 801348 | c.540T>G | synonymous_variant | 0.14 |
rplC | 801357 | c.549T>C | synonymous_variant | 0.14 |
fbiC | 1302962 | p.Ala11Gly | missense_variant | 1.0 |
fbiC | 1303632 | c.702T>G | synonymous_variant | 0.14 |
fbiC | 1303706 | p.Leu259Arg | missense_variant | 0.9 |
fbiC | 1303836 | c.906G>C | synonymous_variant | 0.21 |
fbiC | 1303845 | c.915C>G | synonymous_variant | 0.21 |
fbiC | 1303846 | p.Phe306Val | missense_variant | 0.21 |
fbiC | 1303854 | c.924T>C | synonymous_variant | 0.2 |
fbiC | 1303860 | c.930A>C | synonymous_variant | 0.19 |
fbiC | 1303881 | c.951G>C | synonymous_variant | 0.18 |
fbiC | 1303884 | c.954T>G | synonymous_variant | 0.17 |
fbiC | 1303911 | c.981G>C | synonymous_variant | 0.17 |
fbiC | 1303914 | c.984C>G | synonymous_variant | 0.2 |
fbiC | 1303920 | c.990C>G | synonymous_variant | 0.19 |
fbiC | 1303923 | c.993C>T | synonymous_variant | 0.19 |
fbiC | 1303929 | c.999G>C | synonymous_variant | 0.19 |
fbiC | 1303947 | c.1017T>C | synonymous_variant | 0.2 |
fbiC | 1303948 | p.Gly340Arg | missense_variant | 0.21 |
fbiC | 1303969 | p.Val347Ile | missense_variant | 0.21 |
fbiC | 1303973 | p.Gly348Ala | missense_variant | 0.21 |
fbiC | 1303995 | c.1065C>T | synonymous_variant | 0.16 |
fbiC | 1304001 | c.1071C>G | synonymous_variant | 0.18 |
fbiC | 1304008 | c.1078T>C | synonymous_variant | 0.19 |
fbiC | 1304034 | c.1104A>G | synonymous_variant | 0.19 |
fbiC | 1304040 | c.1110C>G | synonymous_variant | 0.21 |
fbiC | 1304046 | c.1116C>G | synonymous_variant | 0.16 |
fbiC | 1304049 | c.1119T>G | synonymous_variant | 0.15 |
fbiC | 1305204 | c.2274C>T | synonymous_variant | 0.14 |
fbiC | 1305210 | c.2280G>C | synonymous_variant | 0.14 |
fbiC | 1305222 | c.2292C>G | synonymous_variant | 0.14 |
fbiC | 1305231 | c.2301C>G | synonymous_variant | 0.13 |
fbiC | 1305237 | c.2307A>G | synonymous_variant | 0.13 |
fbiC | 1305384 | c.2454G>T | synonymous_variant | 0.97 |
Rv1258c | 1406724 | p.Gln206Leu | missense_variant | 1.0 |
embR | 1416800 | p.Ala183Gly | missense_variant | 1.0 |
rrs | 1472936 | n.1091C>T | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472956 | n.1111T>C | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472957 | n.1112C>T | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472958 | n.1113A>T | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472959 | n.1114T>A | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472963 | n.1118G>A | non_coding_transcript_exon_variant | 0.15 |
rrs | 1472971 | n.1126G>C | non_coding_transcript_exon_variant | 0.19 |
rrs | 1472982 | n.1137G>C | non_coding_transcript_exon_variant | 0.19 |
rrs | 1472987 | n.1142G>T | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472988 | n.1143T>A | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472989 | n.1144G>A | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472990 | n.1145A>G | non_coding_transcript_exon_variant | 0.18 |
rrs | 1473002 | n.1157G>T | non_coding_transcript_exon_variant | 0.16 |
rrs | 1473004 | n.1159T>A | non_coding_transcript_exon_variant | 0.18 |
rrs | 1473008 | n.1163C>A | non_coding_transcript_exon_variant | 0.18 |
rrs | 1473009 | n.1164T>C | non_coding_transcript_exon_variant | 0.18 |
rrs | 1473044 | n.1199C>G | non_coding_transcript_exon_variant | 0.17 |
rrs | 1473051 | n.1206T>C | non_coding_transcript_exon_variant | 0.16 |
rrs | 1473053 | n.1208T>G | non_coding_transcript_exon_variant | 0.14 |
rrs | 1473104 | n.1259C>T | non_coding_transcript_exon_variant | 0.19 |
rrs | 1473105 | n.1260G>A | non_coding_transcript_exon_variant | 0.19 |
rrs | 1473145 | n.1300C>T | non_coding_transcript_exon_variant | 0.18 |
rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474103 | n.446A>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1474104 | n.447G>A | non_coding_transcript_exon_variant | 0.19 |
rrl | 1474111 | n.454T>C | non_coding_transcript_exon_variant | 0.16 |
rrl | 1474112 | n.455T>A | non_coding_transcript_exon_variant | 0.15 |
rrl | 1474140 | n.483C>T | non_coding_transcript_exon_variant | 0.22 |
rrl | 1474151 | n.494C>T | non_coding_transcript_exon_variant | 0.21 |
rrl | 1474181 | n.524C>T | non_coding_transcript_exon_variant | 0.18 |
rrl | 1474249 | n.592G>T | non_coding_transcript_exon_variant | 0.2 |
rrl | 1474356 | n.699T>C | non_coding_transcript_exon_variant | 0.13 |
rrl | 1474794 | n.1137C>T | non_coding_transcript_exon_variant | 0.17 |
rrl | 1476224 | n.2567A>G | non_coding_transcript_exon_variant | 0.16 |
rrl | 1476336 | n.2679C>T | non_coding_transcript_exon_variant | 0.57 |
rrl | 1476356 | n.2699C>A | non_coding_transcript_exon_variant | 0.69 |
rrl | 1476357 | n.2700T>C | non_coding_transcript_exon_variant | 0.68 |
rrl | 1476358 | n.2701T>C | non_coding_transcript_exon_variant | 0.69 |
rrl | 1476359 | n.2702C>G | non_coding_transcript_exon_variant | 0.7 |
rrl | 1476369 | n.2712C>T | non_coding_transcript_exon_variant | 0.74 |
rrl | 1476381 | n.2724G>C | non_coding_transcript_exon_variant | 0.72 |
rrl | 1476382 | n.2725A>G | non_coding_transcript_exon_variant | 0.74 |
rrl | 1476383 | n.2726T>G | non_coding_transcript_exon_variant | 0.74 |
rrl | 1476384 | n.2727G>T | non_coding_transcript_exon_variant | 0.72 |
rrl | 1476408 | n.2751G>A | non_coding_transcript_exon_variant | 0.75 |
rrl | 1476411 | n.2754G>A | non_coding_transcript_exon_variant | 0.73 |
rrl | 1476425 | n.2768G>A | non_coding_transcript_exon_variant | 0.74 |
rrl | 1476429 | n.2772A>C | non_coding_transcript_exon_variant | 0.74 |
rrl | 1476442 | n.2785T>A | non_coding_transcript_exon_variant | 0.71 |
rrl | 1476443 | n.2786G>T | non_coding_transcript_exon_variant | 0.7 |
rrl | 1476455 | n.2798C>A | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476456 | n.2799A>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476463 | n.2806C>T | non_coding_transcript_exon_variant | 0.67 |
rrl | 1476466 | n.2809C>T | non_coding_transcript_exon_variant | 0.66 |
rrl | 1476506 | n.2849T>C | non_coding_transcript_exon_variant | 0.35 |
fabG1 | 1673153 | c.-287C>G | upstream_gene_variant | 1.0 |
rpsA | 1833555 | p.Thr5Ser | missense_variant | 0.96 |
rpsA | 1833667 | c.126C>G | synonymous_variant | 0.13 |
rpsA | 1833742 | c.201A>G | synonymous_variant | 0.15 |
rpsA | 1833745 | c.204G>C | synonymous_variant | 0.15 |
rpsA | 1833787 | c.246C>G | synonymous_variant | 0.19 |
rpsA | 1833790 | c.249T>A | synonymous_variant | 0.19 |
rpsA | 1833799 | c.258C>G | synonymous_variant | 0.19 |
rpsA | 1833811 | c.270G>C | synonymous_variant | 0.15 |
rpsA | 1833838 | c.297G>C | synonymous_variant | 0.14 |
rpsA | 1834073 | p.Lys178* | stop_gained | 0.94 |
rpsA | 1834222 | c.681T>C | synonymous_variant | 0.15 |
rpsA | 1834546 | c.1005T>C | synonymous_variant | 0.15 |
rpsA | 1834555 | c.1014T>C | synonymous_variant | 0.15 |
rpsA | 1834558 | c.1017C>G | synonymous_variant | 0.15 |
rpsA | 1834606 | c.1065C>G | synonymous_variant | 0.19 |
rpsA | 1834609 | c.1068T>C | synonymous_variant | 0.16 |
rpsA | 1834622 | c.1081_1083delTCGinsAGC | synonymous_variant | 0.15 |
rpsA | 1834633 | c.1092A>G | synonymous_variant | 0.19 |
rpsA | 1834639 | c.1098T>C | synonymous_variant | 0.21 |
rpsA | 1834666 | c.1125G>C | synonymous_variant | 0.23 |
rpsA | 1834669 | c.1128G>C | synonymous_variant | 0.24 |
rpsA | 1834688 | c.1147_1149delAGTinsTCC | synonymous_variant | 0.23 |
rpsA | 1834732 | c.1191T>C | synonymous_variant | 0.26 |
rpsA | 1834733 | p.Ala398Pro | missense_variant | 0.25 |
rpsA | 1834753 | c.1212T>C | synonymous_variant | 0.18 |
rpsA | 1834765 | c.1224A>G | synonymous_variant | 0.14 |
PPE35 | 2167669 | p.Phe982Leu | missense_variant | 1.0 |
kasA | 2518621 | c.507G>A | synonymous_variant | 0.15 |
kasA | 2518741 | c.627G>C | synonymous_variant | 0.14 |
kasA | 2518768 | c.654C>G | synonymous_variant | 0.14 |
Rv2752c | 3066234 | c.-43G>A | upstream_gene_variant | 1.0 |
thyX | 3067316 | c.630A>G | synonymous_variant | 0.15 |
thyX | 3067325 | c.621A>G | synonymous_variant | 0.15 |
thyX | 3067355 | c.591A>C | synonymous_variant | 0.15 |
thyX | 3067367 | c.579G>C | synonymous_variant | 0.16 |
thyX | 3067718 | c.228C>G | synonymous_variant | 0.2 |
thyX | 3067721 | c.225T>C | synonymous_variant | 0.2 |
thyX | 3067724 | c.222G>A | synonymous_variant | 0.19 |
thyX | 3067727 | c.219A>C | synonymous_variant | 0.19 |
thyX | 3067739 | c.207T>C | synonymous_variant | 0.21 |
thyX | 3067742 | c.204A>C | synonymous_variant | 0.21 |
thyX | 3067761 | p.Arg62Lys | missense_variant | 0.26 |
thyX | 3067765 | p.Leu61Ile | missense_variant | 0.21 |
thyX | 3067781 | c.165C>G | synonymous_variant | 0.22 |
thyX | 3067787 | c.159G>A | synonymous_variant | 0.28 |
thyX | 3067793 | c.153T>C | synonymous_variant | 0.21 |
thyX | 3067799 | c.147G>A | synonymous_variant | 0.2 |
thyX | 3067802 | c.144C>G | synonymous_variant | 0.21 |
thyX | 3067814 | c.132T>C | synonymous_variant | 0.23 |
thyX | 3067826 | c.120C>G | synonymous_variant | 0.17 |
thyX | 3067850 | c.96A>C | synonymous_variant | 0.15 |
fbiB | 3642276 | c.743delC | frameshift_variant | 1.0 |
rpoA | 3877692 | c.816G>C | synonymous_variant | 0.17 |
rpoA | 3877704 | c.804G>T | synonymous_variant | 0.19 |
rpoA | 3877743 | c.765T>C | synonymous_variant | 0.17 |
rpoA | 3877764 | c.744C>G | synonymous_variant | 0.16 |
rpoA | 3877770 | c.738A>G | synonymous_variant | 0.17 |
rpoA | 3877776 | c.732T>C | synonymous_variant | 0.15 |
rpoA | 3877782 | c.726T>C | synonymous_variant | 0.17 |
rpoA | 3877818 | c.690A>G | synonymous_variant | 0.2 |
rpoA | 3877839 | c.669G>C | synonymous_variant | 0.15 |
rpoA | 3877857 | c.651G>A | synonymous_variant | 0.15 |
rpoA | 3877866 | c.642G>C | synonymous_variant | 0.14 |
rpoA | 3877872 | c.636C>T | synonymous_variant | 0.16 |
rpoA | 3877875 | c.633T>G | synonymous_variant | 0.16 |
rpoA | 3877899 | p.Ser203Thr | missense_variant | 0.16 |
rpoA | 3877905 | c.603A>G | synonymous_variant | 0.15 |
rpoA | 3877908 | p.Asn200Ser | missense_variant | 0.15 |
rpoA | 3878111 | p.Lys133Gln | missense_variant | 0.92 |
clpC1 | 4038452 | c.2253G>C | synonymous_variant | 0.17 |
clpC1 | 4038461 | p.Ala748Asp | missense_variant | 0.14 |
clpC1 | 4038530 | p.Glu725Asp | missense_variant | 0.14 |
clpC1 | 4038536 | c.2169C>T | synonymous_variant | 0.14 |
clpC1 | 4039022 | c.1683A>G | synonymous_variant | 0.14 |
clpC1 | 4039121 | c.1584T>C | synonymous_variant | 0.13 |
clpC1 | 4039142 | c.1563A>G | synonymous_variant | 0.13 |
clpC1 | 4039145 | c.1560G>C | synonymous_variant | 0.13 |
clpC1 | 4039622 | c.1083C>G | synonymous_variant | 0.13 |
clpC1 | 4039928 | c.775_777delAGCinsTCG | synonymous_variant | 0.14 |
clpC1 | 4039946 | c.759A>T | synonymous_variant | 0.16 |
clpC1 | 4039952 | c.753T>C | synonymous_variant | 0.16 |
clpC1 | 4039958 | c.747G>C | synonymous_variant | 0.16 |
clpC1 | 4039979 | c.726C>G | synonymous_variant | 0.14 |
clpC1 | 4040021 | c.684A>C | synonymous_variant | 0.13 |
clpC1 | 4040036 | c.669C>G | synonymous_variant | 0.13 |
embA | 4242703 | c.-530C>T | upstream_gene_variant | 1.0 |
embB | 4249144 | c.2631G>C | synonymous_variant | 1.0 |