TB-Profiler
Home
Upload
SRA data
EBG00000313339
- n.2679C>T
Drug resistance types
479 Sensitive
15 RR-TB
31 HR-TB
44 MDR-TB
15 Pre-XDR-TB
3 XDR-TB
292 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
589
lineage2.2.1
49
lineage1.1.2
42
lineage3
28
lineage4.3.3
15
lineage1.2.2.2
12
La1.2.BCG
11
lineage4.6.1.1
10
lineage2.2.2
8
lineage4.8
7
Showing 1 to 10 of 62 entries
Previous
1
2
3
4
5
6
7
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
879
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR099689
Sensitive
lineage1.1.1.1
None
DRR213597
MDR-TB
lineage2.2.2
None
ERR031466
Sensitive
lineage4.3.4.1
None
ERR1023494
Sensitive
lineage3
None
ERR1034791
RR-TB
lineage4.9
None
ERR10796558
Sensitive
lineage4.3.4.1;lineage4.9
None
ERR10796599
Other
lineage4.8
None
ERR10796615
Other
lineage4.3.3;lineage4.9
None
ERR10796617
Other
lineage4.3.4.1
None
ERR10796627
Other
lineage4.1.2.1;lineage4.9
None
Showing 1 to 10 of 879 entries
Previous
1
2
3
4
5
…
88
Next