EBG00000313325 - n.1278delAinsTT
Drug resistance types
5 Sensitive
1 RR-TB
1 HR-TB
3 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1;lineage1.2.2.1 | 2 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1 | 3 |
| lineage4.8 | 5 |
| lineage4.9.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.3 | 1 |
| 1 | |
| lineage9;lineage3.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage2.2.1;La3 | 1 |
| lineage4.9 | 5 |
| lineage4.1.1.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4;lineage3;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 36 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR11465711 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR3275201 | Sensitive | lineage4.8 | nl | ERR2446563 | Other | lineage2.2.1 | nl | ERR2446570 | Sensitive | lineage4.8 | nl | ERR11465025 | Other | lineage4.1.1.3 | None | ERR12015086 | Other | lineage4.8 | None | ERR12015084 | Other | lineage4.8 | None | ERR245758 | Other | lineage4.9.1 | None | ERR12015085 | Other | lineage4.8 | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR25827682 | Other | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR26159048 | HR-TB | lineage4.9 | None | SRR26159063 | Sensitive | lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR28119741 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR26159035 | Sensitive | lineage4.9 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR28119823 | Sensitive | lineage4.9 | None | SRR25827605 | Pre-XDR-TB | lineage4;lineage3;lineage2.2.1 | None |
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