Rv0486 - c.420G>A
Drug resistance types
33 Sensitive
2 RR-TB
105 HR-TB
11 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| 89 | |
| lineage4.5 | 2 |
| lineage4.1.2.1 | 7 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1 | 7 |
| lineage4.4.1.1 | 2 |
| lineage4.9 | 38 |
| lineage4 | 17 |
| lineage9;lineage3.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage2.2 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.8 | 1 |
| lineage3 | 2 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| La2 | 1 |
| lineage4.3.3 | 1 |
| La1.8.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 194 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811493 | HR-TB | None | ERR736865 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR4812155 | Sensitive | None | ERR6359045 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8976043 | HR-TB | None | ERR987722 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173530 | MDR-TB | lineage2.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR13423544 | Other | lineage4.5 | None | SRR1175508 | Other | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR13837650 | Sensitive | lineage4.9 | None | SRR13837684 | Sensitive | lineage4.9 | None | SRR13837521 | Sensitive | lineage4.9 | None | SRR13837579 | HR-TB | lineage4.9 | None | SRR13837666 | Sensitive | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR6325445 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675502 | Other | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675501 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675222 | Other | None | SRR3675229 | Other | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4814739 | MDR-TB | lineage2.2 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675383 | HR-TB | None | SRR3675456 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | ERR212033 | HR-TB | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | SRR3675555 | HR-TB | None | ERR212034 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR3675571 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR1035162 | Other | None | SRR3675558 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | SRR5341418 | Other | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4820711 | HR-TB | lineage4.1.2 | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341396 | Other | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | ERR1023509 | Other | None | SRR5341330 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6044819 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6046133 | HR-TB | None | SRR5341470 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045519 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045399 | Other | None | SRR6044838 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046015 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6325448 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323036 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR502889 | Other | None | ERR502524 | HR-TB | La2 | None | ERR323041 | HR-TB | None | ERR5311090 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR502943 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323039 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR027293 | Other | None | ERR067681 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR133986 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283014 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3439432 | Other | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797048 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797036 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797083 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4188350 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4797313 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None |
|---|
