lineage | Count |
---|---|
43 | |
lineage4 | 63 |
lineage4.9 | 30 |
lineage2.2.1 | 10 |
lineage2.1 | 2 |
lineage4.1.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.6.2.2 | 1 |
lineage2.2.2 | 4 |
lineage4.9;lineage2.1 | 1 |
lineage4.1.2 | 2 |
lineage4.4.1.2 | 1 |
lineage4.8 | 1 |
lineage4.3.2.1 | 1 |
lineage2.2 | 3 |
La1 | 1 |
lineage4.3.4 | 1 |
spoligotype | Count |
---|---|
None | 166 |
ID | Drug resistance | Lineage | Country iso2 | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR13861636 | Sensitive | lineage4.9 | None | SRR13837710 | Sensitive | lineage4.9 | None | SRR13837856 | Sensitive | lineage4.9 | None | SRR13837971 | Sensitive | lineage4.9 | None | SRR13837972 | Sensitive | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861181 | Sensitive | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861260 | Sensitive | lineage4.9 | None | SRR13861293 | Other | lineage4.9 | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR13837487 | Sensitive | lineage4.9 | None | SRR13837488 | Sensitive | lineage4.9 | None | SRR13837713 | Sensitive | lineage4.9 | None | SRR13837860 | Sensitive | lineage4.9 | None | SRR13837857 | Sensitive | lineage4.9 | None | SRR13837858 | Sensitive | lineage4.9 | None | SRR13837859 | Sensitive | lineage4.9 | None | SRR13837861 | Sensitive | lineage4.9 | None | SRR13837973 | Sensitive | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR23691364 | Other | lineage2.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR23691365 | Other | lineage2.2.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SAMN02360608 | Pre-XDR-TB | lineage2.2.2 | kr | SRR5341293 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341323 | Sensitive | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4821655 | Sensitive | lineage4 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6045010 | Other | lineage4 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6511621 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323108 | HR-TB | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR4024991 | Other | None | ERR473332 | Other | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR736848 | HR-TB | None | ERR9119669 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | SRR1013658 | Pre-XDR-TB | lineage2.2 | None | ERR9634265 | Sensitive | None | SRR1049055 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013659 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049054 | Pre-XDR-TB | lineage2.2.2 | None |
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