Rv1630 - c.288A>G
Drug resistance types
141 Sensitive
23 RR-TB
77 HR-TB
35 MDR-TB
17 Pre-XDR-TB
1 XDR-TB
80 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 90 |
| lineage2.2.1.1 | 2 |
| lineage4 | 107 |
| 55 | |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.2.1 | 27 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 3 |
| lineage4.8 | 5 |
| lineage3 | 9 |
| lineage4.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4;lineage2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.6.1.2 | 4 |
| lineage4.1.2.1 | 8 |
| lineage3.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.8.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage1.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.2.1 | 2 |
| lineage5.2 | 2 |
| lineage4.1 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.3 | 3 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 3 |
| La1 | 1 |
| La1.7.X-unk4 | 1 |
| La1.8.1 | 7 |
| lineage5.1.2 | 1 |
| La1.3 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 374 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21677886 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR8692790 | RR-TB | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR8692887 | Other | None | SRR8692893 | Other | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | ERR176779 | HR-TB | None | SRR8692899 | Other | lineage4.9 | None | ERR176778 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815310 | Other | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR1750907 | RR-TB | None | ERR176651 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815550 | Other | lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR181887 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675555 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR4815023 | Sensitive | lineage4.9 | None | ERR4815075 | MDR-TB | lineage3 | None | SRR3675456 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4816762 | Other | lineage4;lineage2 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816852 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818536 | Other | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4819357 | Other | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341425 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819462 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR2514233 | Sensitive | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR1023509 | Other | None | ERR4819910 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045503 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6511621 | HR-TB | None | SRR6046729 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4 | None | ERR502510 | Sensitive | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6896545 | Other | lineage4.9 | None | SRR7496471 | Sensitive | None | SRR6982246 | Sensitive | lineage4 | None | SRR7496523 | Other | lineage4.7 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1035122 | Sensitive | None | ERR323085 | Sensitive | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063858 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR3283021 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283014 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3283047 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797060 | Other | La1.8.1 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797067 | Other | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR387051 | HR-TB | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178226 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188247 | HR-TB | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4797264 | Sensitive | None | ERR4796577 | MDR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4798823 | HR-TB | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6359070 | Other | lineage4.9 | None | ERR6358979 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866022 | Other | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736834 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10808399 | Sensitive | lineage4 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR10808805 | Sensitive | None | SRR11462861 | Other | La1.8.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR1792022 | Other | La1.8.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
