Rv0639 - c.207G>T
Drug resistance types
81 Sensitive
5 RR-TB
33 HR-TB
21 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
90 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 113 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.1.2.1 | 6 |
| lineage1.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1 | 11 |
| lineage3 | 7 |
| lineage4.8 | 3 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage2.2.2 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage5.2 | 4 |
| lineage2;lineage4.9 | 1 |
| lineage4 | 5 |
| lineage2.2.1;lineage4.9 | 2 |
| La1.7 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La3;lineage4.9 | 6 |
| 4 | |
| lineage4.1.1.3;lineage4.9 | 1 |
| La1.2 | 2 |
| lineage4.8;lineage4.9 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1;lineage4.8 | 1 |
| lineage4.5 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.2.2.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage2.2.1;lineage4 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1;lineage4.9 | 1 |
| lineage4.3.2.1 | 2 |
| lineage1;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 2 |
| La1.7;lineage4.3.4.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 234 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR363421 | Other | lineage4.9 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR212033 | Other | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR990545 | RR-TB | lineage3 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR373946 | Other | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR11662694 | Other | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6045371 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR363453 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR1158918 | Other | lineage4.9 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR373947 | Other | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR234659 | HR-TB | None | ERR2514692 | Other | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR9896144 | Other | lineage3 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR9119499 | MDR-TB | lineage5.2 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6046245 | Other | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR349265 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | SRR3675248 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR363498 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR4812155 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR363502 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR10808730 | Other | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR9786843 | Other | None | ERR11252736 | Other | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR349300 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR363499 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR400345 | Other | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR6865502 | Sensitive | lineage4 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675387 | Other | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR6198317 | Other | La1.2 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4872093 | MDR-TB | lineage5.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR363500 | Other | lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR6045503 | Other | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | ERR400529 | Other | lineage3 | None | ERR752229 | Other | lineage4.5 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR363449 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR373945 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None |
|---|
