Rv3596c - c.1020C>T
Drug resistance types
22 Sensitive
7 RR-TB
53 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| 37 | |
| lineage4.3.2.1 | 2 |
| lineage4.1.2.1 | 13 |
| lineage4.9 | 27 |
| lineage2.2.1 | 7 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage3 | 5 |
| La1.8.1 | 4 |
| lineage4 | 5 |
| La1.3 | 3 |
| lineage4.9;La1.3 | 1 |
| lineage4.3.3 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.2 | 2 |
| lineage2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.8 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 129 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6325444 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | SRR6046514 | HR-TB | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6325448 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR323036 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | SRR8217918 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR5311090 | HR-TB | None | ERR323055 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR323038 | HR-TB | None | SRR7796666 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283017 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR017781 | Other | lineage3 | None | ERR019855 | Other | lineage3 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR363453 | Sensitive | lineage4 | None | ERR3468544 | HR-TB | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR369159 | Sensitive | lineage4 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR4769516 | Other | La1.3 | None | ERR4188350 | HR-TB | None | ERR4769408 | Other | La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR4769552 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR6358837 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR8976043 | HR-TB | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR069989 | HR-TB | lineage2 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR1196768 | MDR-TB | None | SRR13861243 | HR-TB | lineage4.9 | None | SRR13837580 | HR-TB | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861288 | Other | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861296 | Sensitive | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR13861575 | Other | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR13861636 | Sensitive | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR1640750 | HR-TB | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR3675482 | HR-TB | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675545 | HR-TB | None | SRR3675383 | HR-TB | None | ERR2228965 | Other | lineage4.8 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | SRR3675558 | HR-TB | None | ERR4817069 | RR-TB | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4817998 | Other | lineage3 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2514352 | Other | La1.8.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341330 | HR-TB | None | ERR2516626 | Sensitive | lineage4.3.4.1 | None | ERR4821053 | Other | lineage3 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693239 | HR-TB | None | ERR2446118 | Other | lineage4.1.2.1 | nl |
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