Rv0667 - c.1806G>T
Drug resistance types
147 Sensitive
14 RR-TB
118 HR-TB
28 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
108 Other
lineage Counts
| lineage | Count |
|---|---|
| 103 | |
| La1.8.1 | 3 |
| lineage4.9 | 76 |
| lineage3 | 11 |
| lineage7;lineage2.2.1.2 | 1 |
| La1.7.1 | 1 |
| lineage4 | 130 |
| lineage2.2.1 | 28 |
| lineage4.1 | 3 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.1 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.5 | 3 |
| lineage4.1.2.1 | 7 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage4.9;lineage2.1 | 1 |
| lineage2.2.1.1 | 6 |
| lineage5.2 | 2 |
| lineage4.2.1.1 | 1 |
| La2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage2.2 | 2 |
| lineage6.1.1 | 2 |
| lineage5.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.6.5 | 1 |
| lineage6.1.3 | 1 |
| lineage4.7 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 424 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14801749 | Sensitive | None | SRR14782405 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | SRR3675502 | Other | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SAMN02585910 | Other | lineage2.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4815296 | Sensitive | lineage4 | None | SRR3675488 | HR-TB | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR3675501 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675222 | Other | None | SRR3675229 | Other | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675265 | Other | lineage4 | None | ERR4814683 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR3275450 | Other | lineage4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None | ERR176651 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR4816964 | Other | lineage4.9 | None | ERR176740 | HR-TB | None | SRR3675510 | Other | None | SRR3675542 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675550 | Other | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4817480 | Sensitive | lineage4.9 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR2446509 | Other | lineage3 | nl | ERR212125 | HR-TB | lineage4 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR4816756 | RR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4818929 | HR-TB | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | ERR1035162 | Other | None | ERR4818252 | Other | lineage4.1.1.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341387 | Other | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341418 | Other | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4 | None | ERR2515852 | HR-TB | lineage4 | za | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR1023509 | Other | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2515228 | Other | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517475 | Other | lineage4 | None | SRR5341470 | HR-TB | None | SRR5341469 | Other | lineage4 | None | SRR6045503 | HR-TB | None | SRR6045519 | HR-TB | None | ERR4821276 | Other | lineage3 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045892 | Sensitive | None | SRR6044780 | Other | lineage4.9 | None | SRR6045320 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045399 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046210 | Other | lineage4 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046492 | Other | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046397 | Other | None | ERR4830353 | Other | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046824 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6511621 | HR-TB | None | ERR4831638 | Sensitive | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6896361 | HR-TB | lineage4 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6982365 | Other | lineage2.2.1 | None | SRR6982436 | Sensitive | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR502889 | Other | None | ERR502524 | HR-TB | La2 | None | ERR502943 | HR-TB | None | ERR3275190 | Other | lineage3 | nl | SRR9970980 | Other | lineage4.1.2 | None | SRR8217918 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323045 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1034652 | Other | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR108471 | HR-TB | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR1063883 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3283014 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283028 | Other | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3439432 | Other | None | ERR3445503 | HR-TB | None | ERR349298 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR403298 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797264 | Sensitive | None | ERR4797313 | HR-TB | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798504 | Other | lineage3 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798431 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR6358991 | HR-TB | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4812155 | Sensitive | None | ERR6358979 | Other | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736848 | HR-TB | None | ERR6866022 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR751326 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9119669 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR987722 | HR-TB | None | ERR990545 | Other | lineage3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1140736 | RR-TB | None | SRR10808805 | Sensitive | None | SRR1167271 | MDR-TB | lineage4.1.1.3 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1173777 | Other | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175473 | Other | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1183965 | Sensitive | lineage4.9 | None |
|---|
