EBG00000313339 - n.2107A>T
Drug resistance types
99 Sensitive
32 RR-TB
27 HR-TB
40 MDR-TB
17 Pre-XDR-TB
0 XDR-TB
141 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 71 |
| lineage4.1.2.1 | 22 |
| La1.8.1 | 1 |
| lineage4.3.2.1 | 5 |
| lineage4.2.1.1 | 2 |
| lineage4.8 | 20 |
| lineage3.1.2.2 | 2 |
| lineage4.3.4.2 | 8 |
| lineage3 | 25 |
| lineage2.2.1 | 27 |
| lineage4.1.2 | 1 |
| lineage4.1.1 | 8 |
| lineage4.3.2 | 4 |
| lineage4.2.1 | 7 |
| lineage3.1.2.1 | 1 |
| lineage4.3.3 | 7 |
| lineage5.1.4 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4 | 61 |
| lineage4.2.2.2 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage2.2.1.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage1.2.2 | 1 |
| 24 | |
| lineage3.1.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 4 |
| lineage4.4 | 1 |
| lineage4.7 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage2.1 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.3.4.1 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.3 | 2 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage5.1.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.5 | 1 |
| lineage4.6.5 | 2 |
| lineage5.1.1 | 1 |
| lineage3.1.1 | 3 |
| lineage6 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.4.1.1.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 356 |
Geographic prevalence
Country level data for this variant is available for 39 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4818670 | Other | La1.8.1 | gb | ERR2513371 | Sensitive | lineage4.3.2.1 | gb | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR4818691 | Other | lineage4.8 | None | ERR2513392 | Other | lineage4.3.2.1 | gb | ERR4817840 | Other | lineage3.1.2.2 | gb | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR2513401 | HR-TB | lineage3 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4818726 | Other | lineage4.1.2.1 | None | ERR2510796 | HR-TB | lineage4.3.4.2 | it | ERR4817998 | Other | lineage3 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4818810 | Other | lineage2.2.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818834 | Other | lineage4.1.2.1 | None | ERR4818853 | Other | lineage4.1.2 | gb | ERR4818904 | Other | lineage4.8 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818370 | Other | lineage4.1.1 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818498 | Other | lineage3.1.2.1 | gb | ERR4819093 | Other | lineage4.3.3 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818958 | Other | lineage4.1.1 | gb | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR2513619 | Other | lineage4.8 | gb | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4820275 | HR-TB | lineage4.4.1.2 | gb | ERR4819206 | Other | lineage4.8 | None | SRR5341396 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819324 | Other | lineage4.8 | gb | ERR2514174 | Other | lineage4.2.2.2 | gb | ERR4820324 | Other | lineage4 | None | ERR4819524 | Other | lineage3 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4819591 | RR-TB | lineage4.6.2.2 | gb | ERR2514267 | MDR-TB | lineage2.2.1.2 | None | ERR2514394 | Other | lineage4.3.4.2 | None | ERR4819630 | Other | lineage4.8 | gb | ERR2514550 | MDR-TB | lineage3 | gb | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819793 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819950 | RR-TB | lineage4.1.1.3 | gb | ERR4820801 | Other | lineage1.2.2 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR1023509 | Other | None | ERR4819980 | Other | lineage4.1.2.1 | None | ERR4820614 | Other | lineage3.1.2 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | ERR4820026 | Other | lineage3 | None | ERR4820059 | Other | lineage3 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820666 | Other | lineage4.8 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820188 | Other | lineage3 | gb | SRR6045503 | HR-TB | None | ERR2517475 | Other | lineage4 | None | ERR4821127 | HR-TB | lineage4.6.2.2 | gb | ERR4821057 | HR-TB | lineage4 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4822169 | Other | lineage4.1.1.3 | gb | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | ERR4822171 | Other | lineage3 | gb | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821725 | Other | lineage4.8.2 | gb | ERR4822176 | Other | lineage4.1.1.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045690 | Sensitive | lineage4.8 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5818464 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR6044787 | Other | lineage4.4 | None | SRR6045010 | Other | lineage4 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045928 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045986 | Other | lineage3 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045265 | Sensitive | lineage4.8 | None | SRR6045178 | Other | lineage3 | None | SRR6045295 | Other | lineage4.7 | None | SRR6046250 | Other | lineage4.9 | None | SRR6045376 | HR-TB | lineage4.1.2.1 | gb | ERR502478 | RR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046398 | Other | lineage4.1.1.3.1 | gb | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046641 | Other | lineage4.8 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046729 | Other | None | SRR6046790 | Other | lineage4.7 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829420 | Sensitive | lineage4.1.2.1 | it | SRR6046442 | Other | lineage3 | None | SRR6046482 | HR-TB | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR4832052 | HR-TB | lineage2.1 | vn | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4972588 | MDR-TB | lineage4.3.2 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4831638 | Sensitive | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | ERR4831840 | Pre-XDR-TB | lineage2.2.1 | vn | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6982196 | Sensitive | None | SRR6982246 | Sensitive | lineage4 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR7131161 | Other | lineage4.8 | None | ERR502531 | Other | lineage4.9 | None | SRR6982530 | Other | lineage1.2.2.1 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131109 | Pre-XDR-TB | lineage4.8 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR502943 | HR-TB | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR7131198 | Other | lineage4.3.3 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR8217918 | HR-TB | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR9940974 | Other | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283032 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3283041 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188158 | Other | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR5865106 | MDR-TB | lineage4.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9117729 | Other | lineage3 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9117794 | Sensitive | lineage3 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117818 | Sensitive | lineage1.1.2 | None | ERR9787336 | Other | lineage6 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315715 | MDR-TB | lineage4.4.1.1.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315640 | MDR-TB | lineage4.8 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1173281 | RR-TB | lineage3 | None | SRR1172213 | Sensitive | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR1173740 | Other | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR1173310 | MDR-TB | None | SRR1173719 | HR-TB | lineage3 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16156832 | RR-TB | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18572456 | Sensitive | lineage4.9 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR19304029 | Other | lineage4.8 | None | SRR19304083 | Other | lineage4.4.1.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR19303899 | Other | lineage3 | None | SRR19304104 | Other | lineage4.8 | None | ERR4815204 | Other | lineage2.2.1.1 | gb | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR21727888 | Other | lineage1.2.1.2 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675474 | Other | lineage4.1.1 | None | ERR4815680 | Other | lineage1.1.2 | gb | ERR4814312 | Other | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR4814776 | Sensitive | lineage3 | None | ERR3275450 | Other | lineage4 | None | ERR4814791 | Sensitive | lineage4.1.2.1 | gb | SRR3675245 | Other | lineage4.1.2.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675265 | Other | lineage4 | None | ERR4814905 | Other | lineage4.8 | gb | ERR4813263 | MDR-TB | lineage4.8 | None | SRR3675282 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4814986 | Other | lineage4.3.4.2 | None | SRR3675318 | Other | lineage4.9 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4815065 | Other | lineage4.1.2.1 | gb | ERR4815079 | RR-TB | lineage3 | None | ERR4815917 | Other | lineage2.2.1 | gb | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816116 | Sensitive | lineage3 | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR212034 | HR-TB | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4817069 | RR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816437 | Other | lineage3 | gb | SRR3732718 | MDR-TB | lineage4.3.3 | None | ERR4817398 | Other | lineage3.1.1 | None |
|---|
