lineage | Count |
---|---|
lineage4.9 | 112 |
La3;lineage4.9 | 9 |
lineage2.2.1.2;lineage7 | 1 |
lineage4.5 | 1 |
lineage4.3.2.1 | 2 |
lineage2.2.1 | 9 |
lineage4.1;lineage4.9 | 1 |
lineage2.2 | 2 |
La1.2 | 1 |
lineage4.3.4 | 1 |
La3;lineage4 | 1 |
lineage4 | 4 |
La1.7;lineage4.9;lineage7 | 3 |
La3;M.canetti;lineage4.9 | 1 |
La1.7;lineage4.9 | 8 |
lineage2.1;lineage4.9 | 1 |
lineage4.3.4.2.1 | 2 |
lineage1;lineage4.9 | 1 |
1 | |
lineage4.1.2.1 | 5 |
La1.2.BCG;lineage4.9 | 1 |
lineage4.3.4.2 | 2 |
La1.7.1;lineage4.9 | 1 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
lineage1.1.2 | 2 |
lineage4.9;lineage7 | 5 |
lineage5.1.2 | 1 |
La1.2.BCG | 3 |
La1.7;lineage3;lineage4.9;lineage7 | 1 |
lineage4.8 | 2 |
lineage4.1.1.1 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
lineage3 | 1 |
lineage4.9.1 | 1 |
La2;lineage4.9 | 1 |
La1.7;lineage3.1;lineage4 | 1 |
La1.8.1 | 2 |
La3;lineage4.3.4 | 1 |
La1.7.1;La1.7.X-unk4 | 1 |
lineage4.3.3 | 1 |
lineage4.3.4.1 | 3 |
M.canetti;lineage4.9 | 1 |
lineage4.4.1.2 | 1 |
lineage2.2.1.1 | 2 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage4.2;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 205 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR176651 | Other | lineage4.9 | None |
ERR181744 | HR-TB | La3;lineage4.9 | None |
SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
ERR752229 | Other | lineage4.5 | None |
ERR2513724 | Sensitive | lineage4.3.2.1 | None |
ERR3283040 | HR-TB | lineage4.9 | None |
ERR369162 | Other | lineage4.9 | None |
SRR28351584 | HR-TB | lineage2.2.1 | None |
ERR3797029 | Other | lineage4.9 | None |
ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None |
SRR3675270 | Other | lineage4.9 | None |
ERR4810624 | MDR-TB | lineage2.2 | None |
ERR4769421 | Other | La1.2 | None |
ERR736817 | HR-TB | lineage4.3.4 | None |
ERR387051 | Other | lineage4.9 | None |
SRR12142339 | HR-TB | lineage2.2.1 | None |
ERR3283028 | Other | La3;lineage4 | None |
SRR3675265 | Other | lineage4 | None |
ERR9119669 | HR-TB | lineage4.9 | None |
SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None |
ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None |
SRR6046046 | Other | lineage4.9 | None |
ERR3797048 | Other | La3;lineage4.9 | None |
ERR323108 | HR-TB | La1.7;lineage4.9 | None |
SRR3675292 | Sensitive | lineage4.9 | None |
SRR3675495 | Other | lineage2.1;lineage4.9 | None |
ERR736848 | Other | lineage4.9 | None |
ERR176518 | Sensitive | lineage4.3.4.2.1 | None |
SRR14801759 | HR-TB | La1.7;lineage4.9 | None |
ERR349300 | Sensitive | lineage4.9 | None |
ERR363479 | Sensitive | lineage4.9 | None |
ERR926160 | Sensitive | lineage4.9 | None |
ERR323045 | HR-TB | lineage1;lineage4.9 | None |
SRR14782054 | Other | lineage4.9 | None |
ERR181887 | Other | lineage4.9 | None |
SRR10809074 | Sensitive | lineage4.9 | None |
ERR3283014 | Sensitive | La3;lineage4.9 | None |
ERR3283030 | HR-TB | lineage4.9 | None |
ERR349265 | Other | lineage4.9 | None |
ERR373945 | Sensitive | lineage4.9 | None |
ERR363437 | Sensitive | lineage4.9 | None |
ERR212123 | Other | lineage4.9 | None |
SRR6045347 | Other | lineage4.9 | None |
SRR6046593 | Other | lineage4.9 | None |
ERR6865502 | Sensitive | lineage4 | None |
SRR6046897 | Sensitive | lineage4.9 | None |
SRR8692887 | Other | None | |
ERR3283047 | Sensitive | La3;lineage4.9 | None |
ERR363449 | Sensitive | lineage4.9 | None |
ERR363474 | Sensitive | lineage4.9 | None |
ERR3797063 | Sensitive | La3;lineage4.9 | None |
ERR926158 | Sensitive | lineage4.9 | None |
ERR4178226 | Sensitive | lineage4 | None |
ERR4769450 | Other | lineage4.9 | None |
ERR4769474 | HR-TB | lineage4.9 | None |
SRR29096174 | Sensitive | La1.7;lineage4.9 | None |
ERR2041726 | MDR-TB | lineage4.1.2.1 | None |
SRR1915481 | Other | La1.2.BCG;lineage4.9 | None |
ERR9634265 | Sensitive | lineage4.3.4.2 | None |
SRR6045371 | Other | lineage4.9 | None |
ERR926163 | Other | lineage4.9 | None |
ERR176779 | HR-TB | lineage4.9 | None |
SRR3675260 | Sensitive | lineage4.9 | None |
ERR363509 | Sensitive | lineage4.9 | None |
ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None |
ERR926159 | Sensitive | lineage4.9 | None |
ERR363499 | Sensitive | lineage4.9 | None |
ERR349298 | Sensitive | lineage4.9 | None |
ERR4816466 | HR-TB | lineage4.9 | None |
ERR926154 | Sensitive | lineage4.9 | None |
ERR1063849 | HR-TB | lineage4.9 | None |
ERR363502 | Other | lineage4.9 | None |
SRR14782405 | HR-TB | lineage4.9 | None |
ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None |
SRR6045050 | Sensitive | lineage4.3.2.1 | None |
ERR4797193 | HR-TB | lineage1.1.2 | None |
ERR473332 | Other | lineage4.9 | None |
ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
SRR3675456 | RR-TB | lineage4.9;lineage7 | None |
ERR3797046 | HR-TB | lineage4.9 | None |
ERR9786346 | Sensitive | lineage4.3.4.2 | None |
SRR29096246 | Sensitive | La1.7;lineage4.9 | None |
ERR373947 | Other | lineage4.9 | None |
ERR4799513 | HR-TB | lineage2.2 | None |
ERR400538 | RR-TB | lineage5.1.2 | None |
SRR1915485 | Other | La1.2.BCG | None |
ERR349266 | Sensitive | lineage4.9 | None |
ERR5311094 | HR-TB | lineage4.9 | None |
ERR373946 | Sensitive | lineage4.9 | None |
ERR212125 | HR-TB | lineage4.9 | None |
SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None |
ERR3283057 | Sensitive | La3;lineage4.9 | None |
SRR1183145 | Other | lineage2.2.1 | None |
ERR6359082 | Other | lineage4.9 | None |
ERR4796929 | Sensitive | lineage4.9 | None |
ERR4818110 | Sensitive | lineage4.9 | None |
SRR1180270 | Other | lineage2.2.1 | None |
ERR4811493 | HR-TB | lineage4.9 | None |
ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
ERR363456 | Sensitive | lineage4.9 | None |
ERR369159 | Sensitive | lineage4.9 | None |
ERR405209 | Sensitive | La1.7;lineage4.9 | None |
ERR181824 | HR-TB | lineage4.9 | None |
ERR349264 | Sensitive | lineage4.9 | None |
ERR3797079 | Sensitive | lineage4.9 | None |
ERR176778 | HR-TB | lineage4.9 | None |
ERR9786639 | Sensitive | lineage4.8 | None |
ERR6866807 | Other | lineage4.9 | None |
ERR4816113 | Sensitive | lineage4.1.1.1 | None |
SRR6046611 | Sensitive | lineage4.9 | None |
SRR5341373 | Other | lineage4.9 | None |
SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
ERR363453 | Sensitive | lineage4.9 | None |
ERR4817998 | Other | lineage3 | None |
ERR369163 | Sensitive | lineage4.9 | None |
ERR369158 | Other | lineage4.9 | None |
ERR363498 | Sensitive | lineage4.9 | None |
SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
SRR1915479 | Other | La1.2.BCG | None |
ERR4188247 | HR-TB | lineage4.9 | None |
SRR5341400 | Sensitive | lineage4.9 | None |
SRR6044780 | Sensitive | lineage4.9 | None |
SRR6045053 | Other | lineage4 | None |
ERR4178309 | Other | lineage4.1.2.1 | None |
ERR11466061 | Sensitive | lineage4.9.1 | None |
SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
SRR6045548 | Sensitive | lineage4.9 | None |
ERR363506 | Sensitive | lineage4.9 | None |
ERR926162 | Sensitive | lineage4.9 | None |
ERR363490 | Sensitive | lineage4.9 | None |
ERR363421 | Sensitive | lineage4.9 | None |
ERR4799025 | Other | lineage4.8 | None |
SRR6046492 | Other | lineage4.9 | None |
ERR1063857 | MDR-TB | La2;lineage4.9 | None |
ERR3283031 | Sensitive | La3;lineage4.9 | None |
ERR3797015 | HR-TB | lineage4.9 | None |
ERR4769521 | RR-TB | lineage4.9 | None |
ERR363426 | Sensitive | lineage4.9 | None |
ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None |
ERR3797019 | Other | La1.8.1 | None |
ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4819051 | Sensitive | lineage4.9 | None |
ERR161039 | HR-TB | La3;lineage4.3.4 | None |
ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None |
ERR216938 | HR-TB | La1.7;lineage4.9 | None |
ERR161037 | Other | lineage4.9 | None |
ERR6865513 | Other | lineage4.1.2.1 | None |
SRR3675209 | Sensitive | lineage4.9 | None |
ERR3283011 | Other | La3;lineage4.9 | None |
ERR1063846 | HR-TB | lineage4.9 | None |
ERR926161 | Sensitive | lineage4.9 | None |
ERR349299 | Other | lineage4.9 | None |
SRR11349186 | MDR-TB | lineage4.3.3 | None |
ERR1063862 | HR-TB | lineage4.9 | None |
ERR11465235 | Sensitive | lineage4.3.4.2.1 | None |
ERR11465151 | Sensitive | lineage4.3.4.1 | None |
SRR6046802 | Other | lineage4.9 | None |
ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
ERR4816904 | Sensitive | lineage4.1.2.1 | None |
ERR212138 | HR-TB | lineage4.9 | None |
SRR29096387 | Sensitive | M.canetti;lineage4.9 | None |
ERR971389 | Sensitive | lineage4.9 | None |
ERR3797064 | Other | La3;lineage4.9 | None |
ERR369160 | Sensitive | lineage4.9 | None |
ERR363445 | Other | lineage4.9 | None |
ERR926164 | Other | lineage4.9 | None |
SRR7236330 | Other | La1.8.1 | None |
SRR1180172 | Other | lineage2.2.1 | None |
ERR323056 | HR-TB | lineage4.4.1.2 | None |
ERR2660539 | Other | lineage4.9 | None |
ERR11465352 | Sensitive | lineage4.3.4.1 | None |
SRR26937107 | MDR-TB | lineage2.2.1 | None |
ERR363447 | Other | lineage4.9 | None |
ERR11465353 | Sensitive | lineage4.3.4.1 | None |
SRR6045706 | Sensitive | lineage4.9 | None |
ERR4769452 | Other | lineage4.9 | None |
SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
SRR1180147 | Other | lineage2.2.1.1 | None |
SRR1183144 | Other | lineage2.2.1 | None |
SRR1183106 | RR-TB | lineage2.2.1.1 | None |
ERR2041725 | MDR-TB | lineage4.1.2.1 | None |
ERR245675 | Sensitive | lineage1.1.2 | None |
SRR1915487 | Other | La1.2.BCG | None |
ERR349296 | Sensitive | lineage4.9 | None |
SRR11662690 | HR-TB | lineage4.9 | None |
ERR3283055 | HR-TB | lineage4.9 | None |
ERR349330 | Sensitive | lineage4.9 | None |
ERR363446 | Sensitive | lineage4.9 | None |
ERR3797087 | Sensitive | lineage4.9 | None |
ERR926156 | Sensitive | lineage4.9 | None |
SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
ERR3445502 | Sensitive | lineage4.9;lineage7 | None |
ERR736875 | HR-TB | lineage4.9 | None |
ERR926165 | Sensitive | lineage4.9 | None |
SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
SRR6046382 | Sensitive | lineage2.2.1 | None |
SRR6046878 | Other | lineage4.9 | None |
SRR6045217 | Sensitive | lineage4.9 | None |
SRR6045503 | Sensitive | lineage4.9 | None |
ERR1063858 | HR-TB | lineage4.9 | None |
ERR363500 | Sensitive | lineage4.9 | None |
SRR6045010 | Sensitive | lineage4.9 | None |
ERR926155 | Sensitive | lineage4.9 | None |
ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
ERR926157 | Sensitive | lineage4.9 | None |